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MW273921.1__QPZ53399.1__HTVC028P_gp17__00017
Bact-VirMW273921.1__QPZ53399.1__HTVC028P_gp17__00017
Identity
- Accession:
- MW273921 ↗
- Kingdom:
- phage
Quality
76.2
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 4-51
Domain cluster:
representative
CATH (7)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4mb8D00 | 3.10.270.10 | Alpha Beta › Roll › Urate Oxidase › Urate Oxidase; | 0.64 | 54.0 | 3.39e-01 | 100.0% | 32.4% |
| 3vtiA01 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.60 | 40.0 | 3.29e-01 | 70.8% | 83.3% |
| 2cc3A00 | 3.10.450.230 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › VirB8 protein | 0.59 | 48.0 | 3.39e-01 | 91.7% | 29.9% |
| 2jl6101 | 2.20.150.30 | Mainly Beta › Single Sheet › putative 5-dehydro-2- deoxygluconokinase like fold › | 0.58 | 36.0 | 3.80e-01 | 77.1% | 69.8% |
| 4jf8A00 | 3.10.450.230 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › VirB8 protein | 0.57 | 46.0 | 3.29e-01 | 89.6% | 29.9% |
| 3e56A00 | 6.20.180.10 | Special › Other non-globular › Ubiquitin-like (UB roll) › | 0.54 | 44.0 | 3.96e-01 | 97.9% | 100.0% |
| 5i97C00 | 3.10.450.230 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › VirB8 protein | 0.54 | 41.0 | 3.05e-01 | 87.5% | 30.7% |
ECOD (13)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3607599 | 212.1.1.0 ↗ | a+b two layers › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like | 0.67 | 51.0 | 3.00e-01 | 81.2% | 10.8% |
| 3870224 | 2.1.1.267 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › PF30830 | 0.60 | 48.0 | 3.60e-01 | 93.8% | 93.3% |
| 4014561 | 2484.5.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › RNaseH-like domain in reverse transcriptase › RNaseH-like domain in reverse transcriptase | 0.59 | 43.0 | 3.40e-01 | 83.3% | 34.8% |
| 3945348 | 243.1.1.6 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like › VirB8 | 0.58 | 46.0 | 3.63e-01 | 89.6% | 43.0% |
| 3442241 | 5.1.3.118 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_3 | 0.57 | 42.0 | 2.56e-01 | 81.2% | 12.4% |
| 3246669 | 11.1.1.9 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Arrestin_N | 0.56 | 47.0 | 3.42e-01 | 95.8% | 33.6% |
| 3493401 | 11.1.1.9 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Arrestin_N | 0.56 | 44.0 | 3.12e-01 | 91.7% | 25.3% |
| 4951978 | 324.1.1.1 ↗ | a+b two layers › OsmC-like › OsmC-like › OsmC-like › OsmC | 0.55 | 43.0 | 3.09e-01 | 95.8% | 26.8% |
| 5025974 | 12.3.1.74 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › GDE_N | 0.55 | 42.0 | 2.87e-01 | 93.8% | 45.3% |
| 5002542 | 12.3.1.74 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › GDE_N | 0.54 | 41.0 | 2.65e-01 | 87.5% | 60.7% |
| 5011765 | 324.1.1.1 ↗ | a+b two layers › OsmC-like › OsmC-like › OsmC-like › OsmC | 0.52 | 40.0 | 2.99e-01 | 89.6% | 32.6% |
| 3685439 | 109.54.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › C-terminal tetramerization domain of Utp1/Utp21/Utp12/Utp13 › C-terminal tetramerization domain of Utp1/Utp21/Utp12/Utp13 | 0.51 | 37.0 | 2.01e-01 | 77.1% | 4.3% |
| 5052053 | 148.1.3.19 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_lid_3 | 0.50 | 41.0 | 2.79e-01 | 95.8% | 41.5% |