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MW273921.1__QPZ53401.1__HTVC028P_gp19__00019

Bact-Vir

MW273921.1__QPZ53401.1__HTVC028P_gp19__00019

Identity

Accession:
MW273921 ↗
Kingdom:
phage

Quality

91.6 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 1-83
PDB
Domain cluster: representative
D2 medium residues 84-144
PDB
Domain cluster: representative
CATH (55)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
6h9xA01 1.10.287.40 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Serine-tRNA synthetase, tRNA binding domain 0.88 80.0 6.60e-01 98.4% 63.7%
2rd0B00 1.10.287.1490 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.86 78.0 5.91e-01 100.0% 74.8%
4l8jA04 1.10.287.470 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin 0.86 73.0 7.49e-01 98.4% 96.6%
1vf7A03 1.10.287.470 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin 0.86 75.0 7.62e-01 100.0% 96.7%
2oduA02 1.20.58.60 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.85 76.0 6.29e-01 98.4% 64.8%
1w99A01 1.20.190.10 Mainly Alpha › Up-down Bundle › Delta-Endotoxin; domain 1 › Pesticidal crystal protein, N-terminal domain 0.84 74.0 5.27e-01 96.7% 34.7%
4l0rB00 1.20.58.90 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.84 70.0 6.60e-01 91.8% 100.0%
1lrzA03 1.20.58.90 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.84 71.0 7.16e-01 95.1% 93.5%
2dw4A03 1.10.287.80 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ATP synthase, gamma subunit, helix hairpin domain 0.84 75.0 6.30e-01 100.0% 73.3%
1yf2A02 1.10.287.1120 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Bipartite methylase S protein 0.83 74.0 6.13e-01 100.0% 81.3%
1skvA00 1.10.287.660 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin 0.83 72.0 7.15e-01 98.4% 100.0%
4iggA01 1.10.287.160 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HR1 repeat 0.83 73.0 7.07e-01 98.4% 89.6%
6v9zA02 1.20.1560.10 Mainly Alpha › Up-down Bundle › ABC transporter transmembrane region fold › ABC transporter type 1, transmembrane domain 0.82 72.0 4.48e-01 98.4% 20.9%
3zgxA02 6.10.140.1720 Special › Helix non-globular › Helix Hairpins › 0.81 72.0 6.33e-01 100.0% 79.1%
2rp4A00 6.10.280.60 Special › Helix non-globular › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Transcription factor p53, C-terminal domain 0.81 60.0 5.78e-01 85.2% 69.0%
4e6nA02 6.10.140.1010 Special › Helix non-globular › Helix Hairpins › 0.81 71.0 6.93e-01 96.7% 95.5%
2rkhA02 1.20.1280.20 Mainly Alpha › Up-down Bundle › Monooxygenase › HscB, C-terminal domain 0.81 69.0 6.44e-01 95.1% 82.9%
7zd5C01 1.20.1560.10 Mainly Alpha › Up-down Bundle › ABC transporter transmembrane region fold › ABC transporter type 1, transmembrane domain 0.81 71.0 4.42e-01 98.4% 18.9%
3icxA01 1.10.287.660 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin 0.81 71.0 6.67e-01 100.0% 86.7%
3lnnB03 1.10.287.470 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin 0.81 71.0 6.95e-01 100.0% 89.6%
1x4tA01 1.10.287.660 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin 0.80 66.0 6.74e-01 96.7% 96.6%
2xzmO02 1.10.287.10 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › S15/NS1, RNA-binding 0.80 64.0 6.11e-01 86.9% 75.7%
3zdqA01 1.20.1560.10 Mainly Alpha › Up-down Bundle › ABC transporter transmembrane region fold › ABC transporter type 1, transmembrane domain 0.80 69.0 4.29e-01 96.7% 20.1%
3fppA03 6.10.140.1990 Special › Helix non-globular › Helix Hairpins › 0.79 72.0 6.32e-01 100.0% 70.5%
2yevC00 6.10.280.110 Special › Helix non-globular › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.79 67.0 6.68e-01 98.4% 90.5%
1vs5O00 1.10.287.10 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › S15/NS1, RNA-binding 0.79 68.0 6.03e-01 95.1% 68.2%
2y39A00 1.20.120.1490 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › 0.79 69.0 5.69e-01 98.4% 55.5%
3fxdB00 1.20.58.90 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.79 63.0 6.44e-01 88.5% 96.6%
2hz8A00 1.20.120.660 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › IL-4 antagonist (De novo design) like domain 0.79 65.0 5.26e-01 96.7% 48.7%
2gd5A00 6.10.140.1230 Special › Helix non-globular › Helix Hairpins › 0.78 69.0 5.26e-01 100.0% 43.7%
2jdiG01 1.10.287.80 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ATP synthase, gamma subunit, helix hairpin domain 0.78 62.0 6.21e-01 86.9% 86.9%
1tjlA00 1.20.120.910 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › DksA, coiled-coil domain 0.77 66.0 5.06e-01 98.4% 47.6%
3tklB01 1.20.58.90 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.77 65.0 6.55e-01 100.0% 95.2%
2xubA05 6.10.140.1450 Special › Helix non-globular › Helix Hairpins › 0.77 67.0 5.79e-01 98.4% 87.5%
1zpyA00 6.10.140.1960 Special › Helix non-globular › Helix Hairpins › 0.77 65.0 5.81e-01 98.4% 69.2%
2lw1A00 1.10.287.380 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Valyl-tRNA synthetase, C-terminal domain 0.77 67.0 6.03e-01 100.0% 72.9%
2dq0A01 1.10.287.40 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Serine-tRNA synthetase, tRNA binding domain 0.76 65.0 5.53e-01 100.0% 62.6%
3pwfA01 1.20.1260.10 Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle 0.76 65.0 5.13e-01 98.4% 45.8%
4dciA00 6.10.140.1110 Special › Helix non-globular › Helix Hairpins › 0.76 66.0 5.01e-01 100.0% 59.9%
4h63K00 1.10.287.3490 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.76 66.0 5.68e-01 100.0% 65.3%
1zhcA00 6.10.280.50 Special › Helix non-globular › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.75 61.0 5.71e-01 90.2% 72.4%
7metA01 1.20.1560.10 Mainly Alpha › Up-down Bundle › ABC transporter transmembrane region fold › ABC transporter type 1, transmembrane domain 0.75 65.0 4.13e-01 98.4% 20.1%
4h63H01 1.20.58.1710 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.75 64.0 6.08e-01 96.7% 87.5%
1cxzB00 1.10.287.160 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HR1 repeat 0.75 64.0 5.82e-01 100.0% 90.7%
3gnlB02 1.10.287.1890 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.75 58.0 5.67e-01 91.8% 77.9%
2itbB00 1.20.1260.10 Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle 0.74 61.0 4.29e-01 95.1% 28.8%
3a8pA02 6.10.140.680 Special › Helix non-globular › Helix Hairpins › 0.74 63.0 5.26e-01 100.0% 62.3%
2hh7A00 1.20.58.1000 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Metal-sensitive repressor, helix protomer 0.72 58.0 5.33e-01 95.1% 67.1%
3rc3A05 1.20.58.1080 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.72 60.0 4.91e-01 93.4% 50.4%
1avoB00 1.20.120.180 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Proteasome activator pa28, C-terminal domain 0.70 58.0 4.62e-01 100.0% 46.4%
3vm9A02 6.10.140.2110 Special › Helix non-globular › Helix Hairpins › 0.69 48.0 4.99e-01 72.1% 84.2%
3wmeA01 1.20.1560.10 Mainly Alpha › Up-down Bundle › ABC transporter transmembrane region fold › ABC transporter type 1, transmembrane domain 0.68 60.0 3.80e-01 100.0% 53.3%
2uv8A07 6.10.140.1410 Special › Helix non-globular › Helix Hairpins › 0.66 53.0 4.80e-01 88.5% 74.1%
2btqB03 1.10.287.600 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin 0.62 48.0 5.08e-01 90.2% 98.1%
2vkzA02 3.40.47.10 Alpha Beta › 3-Layer(aba) Sandwich › Peroxisomal Thiolase; Chain A, domain 1 › Thiolase/Chalcone synthase 0.60 53.0 3.51e-01 100.0% 84.4%
ECOD (43)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3990125 622.4.1.0 alpha bundles › YvfG-like › Mite allergen Der p 5-related › Mite allergen Der p 5-related 0.94 88.0 7.13e-01 100.0% 76.2%
3231463 632.8.1.2 alpha bundles › immunoglobulin/albumin-binding domain-like › alpha-2-Macroglobulin receptor associated protein (RAP) domain 1 › alpha-2-Macroglobulin receptor associated protein (RAP) domain 1 › Alpha-2-MRAP_C 0.92 85.0 7.16e-01 98.4% 65.3%
4497069 192.7.1.2 alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm › Seryl_tRNA_N 0.89 81.0 6.66e-01 100.0% 60.0%
2388286 601.1.1.0 alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › alpha-catenin/vinculin 0.89 80.0 7.54e-01 98.4% 86.1%
3400862 3291.1.1.0 alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related 0.87 79.0 5.61e-01 100.0% 37.1%
3462297 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.86 77.0 7.20e-01 100.0% 84.0%
3972236 3755.3.1.42 alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin › CheZ 0.86 78.0 5.42e-01 98.4% 33.3%
4953232 1075.4.1.1 alpha bundles › Type II ABC exporter transmembrane domain fold › Type I ABC exporter transmembrane domain fold › Type I ABC exporter transmembrane domain fold › ABC_membrane 0.85 71.0 4.45e-01 90.2% 23.4%
3729994 3755.3.1.284 alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin › Utp11 0.85 78.0 5.98e-01 100.0% 48.5%
4001344 1075.4.1.2 alpha bundles › Type II ABC exporter transmembrane domain fold › Type I ABC exporter transmembrane domain fold › Type I ABC exporter transmembrane domain fold › ABC_membrane_2 0.84 75.0 4.54e-01 100.0% 16.3%
4674 192.7.1.1 alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm › FemAB 0.84 72.0 7.11e-01 98.4% 90.8%
3946332 1075.4.1.1 alpha bundles › Type II ABC exporter transmembrane domain fold › Type I ABC exporter transmembrane domain fold › Type I ABC exporter transmembrane domain fold › ABC_membrane 0.83 74.0 4.55e-01 98.4% 20.0%
4934444 192.2.1.0 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin 0.83 73.0 7.04e-01 100.0% 90.0%
3596751 1075.4.1.0 alpha bundles › Type II ABC exporter transmembrane domain fold › Type I ABC exporter transmembrane domain fold › Type I ABC exporter transmembrane domain fold 0.82 73.0 4.47e-01 98.4% 19.1%
3801044 1075.4.1.0 alpha bundles › Type II ABC exporter transmembrane domain fold › Type I ABC exporter transmembrane domain fold › Type I ABC exporter transmembrane domain fold 0.81 72.0 4.11e-01 100.0% 10.5%
3630260 1075.4.1.2 alpha bundles › Type II ABC exporter transmembrane domain fold › Type I ABC exporter transmembrane domain fold › Type I ABC exporter transmembrane domain fold › ABC_membrane_2 0.81 72.0 4.51e-01 100.0% 19.7%
5063166 192.7.1.2 alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm › Seryl_tRNA_N 0.81 72.0 5.99e-01 100.0% 60.0%
5048800 3755.3.1.0 alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin 0.81 71.0 5.03e-01 100.0% 34.1%
3700567 1075.4.1.1 alpha bundles › Type II ABC exporter transmembrane domain fold › Type I ABC exporter transmembrane domain fold › Type I ABC exporter transmembrane domain fold › ABC_membrane 0.80 70.0 4.36e-01 98.4% 19.7%
4099306 1075.4.1.1 alpha bundles › Type II ABC exporter transmembrane domain fold › Type I ABC exporter transmembrane domain fold › Type I ABC exporter transmembrane domain fold › ABC_membrane 0.79 70.0 4.42e-01 100.0% 23.3%
3388451 1075.4.1.1 alpha bundles › Type II ABC exporter transmembrane domain fold › Type I ABC exporter transmembrane domain fold › Type I ABC exporter transmembrane domain fold › ABC_membrane 0.79 69.0 4.35e-01 98.4% 22.5%
3446311 1075.4.1.1 alpha bundles › Type II ABC exporter transmembrane domain fold › Type I ABC exporter transmembrane domain fold › Type I ABC exporter transmembrane domain fold › ABC_membrane 0.79 69.0 4.40e-01 98.4% 22.3%
3558580 1075.4.1.1 alpha bundles › Type II ABC exporter transmembrane domain fold › Type I ABC exporter transmembrane domain fold › Type I ABC exporter transmembrane domain fold › ABC_membrane 0.79 69.0 4.23e-01 100.0% 17.3%
3274161 4163.1.1.1 alpha bundles › GINS helical bundle-like › GINS helical bundle-like › PSF1 N-terminal domain-like › Sld5 0.79 68.0 5.33e-01 100.0% 52.6%
3763838 1075.4.1.1 alpha bundles › Type II ABC exporter transmembrane domain fold › Type I ABC exporter transmembrane domain fold › Type I ABC exporter transmembrane domain fold › ABC_membrane 0.79 69.0 4.29e-01 98.4% 20.3%
3594664 1075.4.1.0 alpha bundles › Type II ABC exporter transmembrane domain fold › Type I ABC exporter transmembrane domain fold › Type I ABC exporter transmembrane domain fold 0.78 65.0 3.94e-01 90.2% 24.6%
5063261 1075.4.1.1 alpha bundles › Type II ABC exporter transmembrane domain fold › Type I ABC exporter transmembrane domain fold › Type I ABC exporter transmembrane domain fold › ABC_membrane 0.78 68.0 4.30e-01 100.0% 20.0%
3770213 1075.4.1.1 alpha bundles › Type II ABC exporter transmembrane domain fold › Type I ABC exporter transmembrane domain fold › Type I ABC exporter transmembrane domain fold › ABC_membrane 0.78 68.0 4.21e-01 100.0% 18.3%
5046916 1075.4.1.1 alpha bundles › Type II ABC exporter transmembrane domain fold › Type I ABC exporter transmembrane domain fold › Type I ABC exporter transmembrane domain fold › ABC_membrane 0.78 67.0 4.21e-01 98.4% 21.5%
5029677 1075.4.1.1 alpha bundles › Type II ABC exporter transmembrane domain fold › Type I ABC exporter transmembrane domain fold › Type I ABC exporter transmembrane domain fold › ABC_membrane 0.77 67.0 4.21e-01 100.0% 63.0%
3999727 1075.4.1.1 alpha bundles › Type II ABC exporter transmembrane domain fold › Type I ABC exporter transmembrane domain fold › Type I ABC exporter transmembrane domain fold › ABC_membrane 0.77 66.0 4.03e-01 100.0% 16.0%
4030705 1075.4.1.0 alpha bundles › Type II ABC exporter transmembrane domain fold › Type I ABC exporter transmembrane domain fold › Type I ABC exporter transmembrane domain fold 0.76 66.0 4.05e-01 98.4% 49.5%
3824360 1075.4.1.1 alpha bundles › Type II ABC exporter transmembrane domain fold › Type I ABC exporter transmembrane domain fold › Type I ABC exporter transmembrane domain fold › ABC_membrane 0.75 64.0 3.98e-01 95.1% 28.1%
4001533 1075.4.1.1 alpha bundles › Type II ABC exporter transmembrane domain fold › Type I ABC exporter transmembrane domain fold › Type I ABC exporter transmembrane domain fold › ABC_membrane 0.75 64.0 4.35e-01 98.4% 29.1%
4025973 1075.4.1.1 alpha bundles › Type II ABC exporter transmembrane domain fold › Type I ABC exporter transmembrane domain fold › Type I ABC exporter transmembrane domain fold › ABC_membrane 0.74 64.0 4.05e-01 98.4% 19.7%
3584613 1075.4.1.1 alpha bundles › Type II ABC exporter transmembrane domain fold › Type I ABC exporter transmembrane domain fold › Type I ABC exporter transmembrane domain fold › ABC_membrane 0.74 64.0 4.13e-01 100.0% 60.3%
3342680 1075.4.1.1 alpha bundles › Type II ABC exporter transmembrane domain fold › Type I ABC exporter transmembrane domain fold › Type I ABC exporter transmembrane domain fold › ABC_membrane 0.74 64.0 4.03e-01 100.0% 75.8%
3584684 1075.4.1.1 alpha bundles › Type II ABC exporter transmembrane domain fold › Type I ABC exporter transmembrane domain fold › Type I ABC exporter transmembrane domain fold › ABC_membrane 0.74 63.0 3.89e-01 98.4% 16.5%
3977185 1075.4.1.1 alpha bundles › Type II ABC exporter transmembrane domain fold › Type I ABC exporter transmembrane domain fold › Type I ABC exporter transmembrane domain fold › ABC_membrane 0.74 63.0 4.01e-01 98.4% 19.7%
3699015 1075.4.1.1 alpha bundles › Type II ABC exporter transmembrane domain fold › Type I ABC exporter transmembrane domain fold › Type I ABC exporter transmembrane domain fold › ABC_membrane 0.73 62.0 3.88e-01 98.4% 17.7%
4962634 1075.4.1.1 alpha bundles › Type II ABC exporter transmembrane domain fold › Type I ABC exporter transmembrane domain fold › Type I ABC exporter transmembrane domain fold › ABC_membrane 0.73 63.0 3.95e-01 100.0% 57.1%
3461932 3922.1.1.189 alpha bundles › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › DUF630 0.73 63.0 5.47e-01 98.4% 70.5%
3189035 192.8.1.0 alpha bundles › Long alpha-hairpin › Eukaryotic DNA topoisomerase I, dispensable insert domain › Eukaryotic DNA topoisomerase I, dispensable insert domain 0.71 59.0 5.64e-01 100.0% 80.0%