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MW273923.1__QPZ53536.1__HTVC035P_gp39__00039

Bact-Vir

MW273923.1__QPZ53536.1__HTVC035P_gp39__00039

Identity

Accession:
MW273923 ↗
Kingdom:
phage

Quality

85.3 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Pelagibacter_phage_HTVC035P

TaxID: 2796521

Cluster

View cluster (13 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 27-199
PDB
Domain cluster: rep: NC_001902__NP_046981.1__psiM2p27__00027__D58-215
CATH (48)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1nlqE00 2.60.120.340 Mainly Beta › Sandwich › Jelly Rolls › Nucleoplasmin core domain 0.69 40.0 5.11e-01 100.0% 100.0%
1nqjB00 2.60.120.380 Mainly Beta › Sandwich › Jelly Rolls › 0.67 38.0 4.57e-01 99.4% 83.3%
1pm4A00 2.60.120.510 Mainly Beta › Sandwich › Jelly Rolls › Mitogen Ypm 0.65 39.0 4.66e-01 100.0% 87.2%
8hhvA01 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.65 39.0 4.55e-01 97.1% 84.4%
3ap9A00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.64 52.0 5.54e-01 100.0% 98.0%
6n44A00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.63 48.0 5.30e-01 96.0% 97.8%
2df7A02 2.60.120.660 Mainly Beta › Sandwich › Jelly Rolls › icosahedral virus 0.63 48.0 5.30e-01 100.0% 97.1%
4zchA01 2.60.120.40 Mainly Beta › Sandwich › Jelly Rolls › 0.61 45.0 5.11e-01 99.4% 100.0%
3a21A03 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.60 35.0 4.32e-01 100.0% 95.0%
6mw4A01 2.60.120.1290 Mainly Beta › Sandwich › Jelly Rolls › 0.58 40.0 4.52e-01 99.4% 91.5%
2gvhB02 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.58 39.0 4.59e-01 86.7% 100.0%
2a6vB00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.57 52.0 4.85e-01 100.0% 99.1%
3b7kB01 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.57 38.0 4.20e-01 84.4% 83.6%
1tnrA00 2.60.120.40 Mainly Beta › Sandwich › Jelly Rolls › 0.57 45.0 4.95e-01 100.0% 100.0%
2vvfA02 2.60.120.730 Mainly Beta › Sandwich › Jelly Rolls › 0.56 38.0 4.34e-01 100.0% 92.2%
4xuoA00 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.56 46.0 4.84e-01 100.0% 95.5%
5dl8A00 2.40.160.10 Mainly Beta › Beta Barrel › Porin › Porin 0.56 41.0 3.11e-01 86.1% 33.0%
2w47A00 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.56 40.0 4.49e-01 100.0% 94.8%
1vavA00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.56 51.0 4.70e-01 99.4% 99.5%
5ocqA00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.55 51.0 4.36e-01 100.0% 94.8%
1uc6A00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.54 28.0 3.42e-01 71.1% 75.2%
1yi9A02 2.60.120.230 Mainly Beta › Sandwich › Jelly Rolls › 0.54 35.0 3.84e-01 97.7% 81.0%
2gvhC01 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.54 40.0 4.42e-01 89.0% 97.1%
5x7qA02 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.54 38.0 4.41e-01 100.0% 100.0%
1w0pA03 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.53 42.0 4.16e-01 97.1% 77.5%
4bcuA00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.53 48.0 4.70e-01 100.0% 89.4%
8os3A01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.53 29.0 3.79e-01 97.1% 97.8%
1wfoA01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.53 31.0 3.78e-01 94.8% 91.3%
6eheA01 2.40.160.10 Mainly Beta › Beta Barrel › Porin › Porin 0.53 36.0 2.97e-01 86.1% 39.1%
2cdoA00 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.53 39.0 4.32e-01 100.0% 96.4%
2okxA01 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.53 34.0 3.49e-01 100.0% 66.1%
4kq7A02 2.60.120.1390 Mainly Beta › Sandwich › Jelly Rolls › Protein of unknown function DUF2961 0.53 45.0 4.24e-01 100.0% 74.9%
4gwmA02 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.52 46.0 4.73e-01 100.0% 97.6%
2v1oB00 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.52 37.0 4.00e-01 81.5% 85.8%
4h3wA02 2.60.120.1260 Mainly Beta › Sandwich › Jelly Rolls › 0.52 41.0 4.34e-01 100.0% 94.1%
2porA00 2.40.160.10 Mainly Beta › Beta Barrel › Porin › Porin 0.52 35.0 2.86e-01 86.1% 38.5%
2c9aA01 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.52 44.0 4.58e-01 100.0% 96.3%
1fx3B00 3.10.420.10 Alpha Beta › Roll › Bacterial Protein-export protein SecB › SecB-like 0.51 36.0 3.85e-01 71.1% 95.3%
1w9sA00 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.51 36.0 3.99e-01 100.0% 93.3%
3kg7B00 3.10.129.110 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Polyketide synthase dehydratase 0.51 40.0 3.40e-01 83.8% 50.2%
1umzA00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.51 46.0 4.02e-01 100.0% 75.3%
7ox5A01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.51 28.0 3.42e-01 70.5% 86.4%
1q6wG00 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.51 38.0 4.10e-01 78.0% 99.3%
2ervA00 2.40.160.20 Mainly Beta › Beta Barrel › Porin › 0.51 34.0 3.63e-01 88.4% 77.3%
1fyhB01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.50 29.0 3.71e-01 94.8% 100.0%
3e1eC00 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.50 39.0 4.28e-01 87.9% 100.0%
1f6fB01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.50 29.0 3.70e-01 94.2% 100.0%
1xkwA02 2.40.170.20 Mainly Beta › Beta Barrel › Maltoporin; Chain A › TonB-dependent receptor, beta-barrel domain 0.50 35.0 2.46e-01 86.1% 23.5%
ECOD (31)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5038687 10.1.2.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.70 41.0 5.23e-01 100.0% 99.0%
5005599 10.1.2.201 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) › PF27237 0.70 38.0 5.08e-01 93.6% 100.0%
4202051 10.32.1.271 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › PF27237 0.70 38.0 5.08e-01 93.6% 100.0%
3228358 10.32.1.258 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › GBD_IRG7_N 0.69 38.0 5.09e-01 100.0% 98.9%
3934762 10.32.1.258 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › GBD_IRG7_N 0.69 38.0 4.97e-01 100.0% 95.0%
3510331 10.4.1.0 ↗ beta sandwiches › jelly-roll › Spermadhesin, CUB domain › Spermadhesin, CUB domain 0.66 41.0 4.73e-01 100.0% 84.0%
5058689 10.1.2.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.66 38.0 4.79e-01 93.6% 96.0%
1725184 10.43.1.1 ↗ beta sandwiches › jelly-roll › Major structural protein 1 jelly-roll domain › Major structural protein 1 jelly-roll domain › MSP1_barrel 0.64 40.0 4.59e-01 100.0% 84.4%
4062548 10.32.1.4 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › EMP24_GP25L 0.63 39.0 4.06e-01 97.7% 65.5%
4011220 10.32.1.0 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.63 43.0 5.01e-01 98.3% 97.6%
3933402 10.32.1.4 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › EMP24_GP25L 0.63 36.0 4.23e-01 100.0% 81.7%
4181607 10.32.1.0 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.60 40.0 4.73e-01 99.4% 97.5%
4026938 10.32.1.0 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.60 42.0 4.86e-01 97.7% 98.4%
4955347 10.1.2.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.59 36.0 4.41e-01 92.5% 98.1%
5039888 10.4.1.0 ↗ beta sandwiches › jelly-roll › Spermadhesin, CUB domain › Spermadhesin, CUB domain 0.58 38.0 4.35e-01 100.0% 89.6%
3390429 10.32.1.0 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.58 43.0 4.67e-01 99.4% 91.7%
4961700 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.57 32.0 4.11e-01 93.1% 98.9%
3468653 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.56 26.0 3.78e-01 96.5% 100.0%
5070958 10.1.1.41 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › GH43_C2 0.55 51.0 4.86e-01 100.0% 99.5%
3406924 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.55 27.0 3.50e-01 100.0% 85.6%
5010985 10.1.1.117 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Thermopsin 0.54 46.0 3.96e-01 94.2% 79.3%
3911101 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.54 31.0 3.92e-01 94.2% 97.0%
4034405 5084.5.2.0 ↗ beta barrels › Outer membrane meander beta-barrels › Porins › Maltoporin-like 0.54 32.0 2.35e-01 85.5% 22.0%
1806543 5084.5.1.15 ↗ beta barrels › Outer membrane meander beta-barrels › Porins › Porin › PgaA_barrel 0.53 36.0 3.05e-01 86.1% 41.0%
3477632 10.32.1.0 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.53 41.0 4.26e-01 100.0% 85.6%
3207356 10.1.1.22 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › DUF1349 0.52 48.0 4.57e-01 100.0% 91.0%
3630656 11.1.1.957 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Fn3_Dep-1_6th 0.51 30.0 3.82e-01 96.5% 100.0%
4003995 10.32.1.0 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.51 38.0 4.10e-01 100.0% 90.7%
3838939 5084.5.1.0 ↗ beta barrels › Outer membrane meander beta-barrels › Porins › Porin 0.51 39.0 2.98e-01 86.1% 35.6%
3568181 11.1.1.451 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › DUF4590 0.50 27.0 3.13e-01 84.4% 70.4%
2462280 331.3.1.6 ↗ a+b two layers › TBP-like › Bet v1-like › Bet v1-like › PRELI 0.50 27.0 2.74e-01 80.3% 48.9%