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MW273923.1__QPZ53537.1__HTVC035P_gp40__00040

Bact-Vir

MW273923.1__QPZ53537.1__HTVC035P_gp40__00040

Identity

Accession:
MW273923 ↗
Kingdom:
phage

Quality

96.3 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Pelagibacter_phage_HTVC035P

TaxID: 2796521

Cluster

View cluster (2 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 10-94
PDB
Domain cluster: representative
CATH (3)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
6xm1A02 3.90.830.10 Alpha Beta › Alpha-Beta Complex › Syntaxin Binding Protein 1; Chain A, domain 2 › Sec1/Munc18 (SM) protein, domain 3a 0.71 40.0 3.62e-01 75.3% 41.6%
1cxpC00 1.10.640.10 Mainly Alpha › Orthogonal Bundle › Myeloperoxidase, subunit C › Haem peroxidase domain superfamily, animal type 0.57 42.0 2.58e-01 76.5% 15.2%
2xdbA00 3.10.129.130 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › 0.52 35.0 2.87e-01 70.6% 88.3%
ECOD (6)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3463832 386.1.1.334 ↗ few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › Utp11 0.67 46.0 3.94e-01 82.4% 46.2%
3404701 376.1.3.11 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger › zf-HC5HC2H_2 0.65 42.0 3.42e-01 85.9% 37.3%
4039152 2.9.1.1 ↗ beta barrels › OB-fold › RNB domain-like › RNB domain-like › RNB 0.61 48.0 2.98e-01 82.4% 44.7%
4289036 101.1.2.59 ↗ alpha arrays › HTH › HTH › winged helix domain › DUF480 0.58 47.0 4.02e-01 85.9% 82.7%
3234604 633.23.1.14 ↗ alpha bundles › Bromodomain-like › Claudin › Claudin › Claudin_3 0.54 50.0 3.90e-01 100.0% 84.6%
3964295 230.4.1.1 ↗ a+b two layers › T-fold › ApbE-like › ApbE-like › ApbE 0.50 42.0 4.18e-01 100.0% 88.9%