Back to structures

MW286268.1__QQO90899.1__X__00032

Bact-Vir

MW286268.1__QQO90899.1__X__00032

Identity

Accession:
MW286268 ↗
Kingdom:
phage

Quality

84.4 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 11-60
PDB
Domain cluster: representative
CATH (39)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1d2mA03 6.10.140.240 Special › Helix non-globular › Helix Hairpins › 0.89 61.0 5.53e-01 72.0% 54.5%
8befJ01 1.20.120.1200 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › NADH-ubiquinone/plastoquinone oxidoreductase chain 6, subunit NuoJ 0.83 56.0 3.79e-01 70.0% 22.4%
1gaxA02 1.10.730.10 Mainly Alpha › Orthogonal Bundle › Isoleucyl-tRNA Synthetase; Domain 1 › Isoleucyl-tRNA Synthetase; Domain 1 0.80 71.0 4.52e-01 98.0% 42.3%
1rqgA04 1.10.730.10 Mainly Alpha › Orthogonal Bundle › Isoleucyl-tRNA Synthetase; Domain 1 › Isoleucyl-tRNA Synthetase; Domain 1 0.79 70.0 4.89e-01 98.0% 62.9%
7vepA01 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.78 62.0 3.91e-01 94.0% 17.0%
4rg9B01 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.78 63.0 4.35e-01 90.0% 41.9%
4od4A02 1.20.120.1780 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › UbiA prenyltransferase 0.78 53.0 3.98e-01 72.0% 30.3%
4nrhB00 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.77 65.0 4.46e-01 96.0% 43.5%
4nq0A00 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.76 68.0 4.28e-01 100.0% 56.7%
2r5sA02 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.76 65.0 5.39e-01 96.0% 58.0%
6fdpA00 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.76 63.0 4.82e-01 96.0% 61.7%
4gpkF02 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.75 65.0 4.16e-01 98.0% 32.1%
2p58C00 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.75 64.0 4.91e-01 98.0% 42.9%
5djsA01 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.75 65.0 4.71e-01 100.0% 54.5%
4malA00 1.20.58.2200 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.75 62.0 5.91e-01 94.0% 81.4%
2cfuA02 1.25.40.880 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Alkyl sulfatase, dimerisation domain 0.74 62.0 4.48e-01 94.0% 34.0%
3k9iA01 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.74 65.0 5.15e-01 100.0% 49.5%
3ma5A00 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.74 60.0 5.00e-01 92.0% 86.7%
2vgxB00 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.74 61.0 4.45e-01 96.0% 51.0%
5l0wB01 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.74 62.0 4.54e-01 96.0% 62.3%
2ra1A02 1.20.58.780 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.74 61.0 5.57e-01 94.0% 100.0%
2ho1B00 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.73 61.0 4.04e-01 98.0% 35.7%
2d2sA01 1.20.58.1210 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Exo84p, N-terminal helical domain 0.73 65.0 4.94e-01 100.0% 50.9%
4aifA00 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.73 64.0 4.60e-01 100.0% 54.2%
5fzsA00 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.73 61.0 4.80e-01 94.0% 44.9%
4gyoB01 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.73 64.0 4.63e-01 100.0% 68.3%
2c2lA01 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.73 61.0 4.49e-01 94.0% 84.2%
4gywA01 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.73 61.0 4.82e-01 96.0% 73.3%
2xevB00 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.73 61.0 4.61e-01 96.0% 64.5%
3qdnA02 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.72 62.0 5.22e-01 96.0% 58.3%
3ph0C00 1.25.40.1040 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › 0.70 59.0 5.84e-01 100.0% 92.5%
3hymL00 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.70 61.0 3.77e-01 100.0% 47.2%
1j5wA02 1.20.58.180 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Class II aaRS and biotin synthetases; domain 2 0.70 60.0 5.28e-01 100.0% 83.1%
2vyiA00 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.70 61.0 4.56e-01 100.0% 89.8%
4rg6A03 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.70 61.0 4.51e-01 100.0% 85.7%
2kj8A00 1.10.150.130 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Tyrosine recombinase, N-terminal domain 0.69 57.0 4.48e-01 100.0% 86.4%
3oxfA05 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.66 58.0 5.10e-01 100.0% 78.7%
1iwpG02 1.10.1510.20 Mainly Alpha › Orthogonal Bundle › Hypothetical Protein Yqey; Chain: A; domain1 › Propanediol/glycerol dehydratase, small subunit 0.62 51.0 4.33e-01 100.0% 55.9%
6axgA01 1.20.870.10 Mainly Alpha › Up-down Bundle › Son of sevenless (SoS) protein; Chain S, domain 1 › Son of sevenless (SoS) protein Chain: S domain 1 0.62 50.0 4.33e-01 100.0% 66.3%
ECOD (29)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4121991 109.4.1.888 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › HAT_Syf1_CNRKL1_N 0.86 78.0 4.69e-01 100.0% 17.0%
4648749 101.1.2.274 alpha arrays › HTH › HTH › winged helix domain › SgrR_N 0.83 75.0 5.60e-01 100.0% 85.0%
4990053 632.18.1.0 alpha bundles › immunoglobulin/albumin-binding domain-like › hypothetical protein PA2901 › hypothetical protein PA2901 0.83 57.0 5.07e-01 72.0% 51.4%
4373359 109.4.1.890 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › HAT_Syf1_CNRKL1_C 0.82 73.0 4.67e-01 98.0% 32.9%
4011644 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.81 72.0 4.68e-01 98.0% 24.0%
4286990 109.4.1.1995 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_4, TPR_16, TPR_19 0.80 69.0 4.15e-01 98.0% 25.8%
3573562 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.80 71.0 4.10e-01 100.0% 13.4%
3938639 109.4.1.186 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › ANAPC3 0.79 68.0 4.32e-01 96.0% 31.0%
3496700 109.4.1.890 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › HAT_Syf1_CNRKL1_C 0.79 68.0 4.50e-01 96.0% 26.0%
5051492 604.12.1.0 alpha bundles › Spectrin repeat-like › MIT domain › MIT domain 0.77 64.0 6.21e-01 92.0% 100.0%
3796824 109.7.1.0 alpha superhelices › Repetitive alpha hairpins › Cytochrome c oxidase subunit E › Cytochrome c oxidase subunit E 0.77 69.0 6.15e-01 100.0% 80.0%
3487203 192.2.1.0 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin 0.77 54.0 4.58e-01 76.0% 92.9%
3430238 109.4.1.1353 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_8, TPR_11, TPR_16 0.76 67.0 3.86e-01 100.0% 16.8%
145117 109.4.1.110 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Mad3_BUB1_I 0.76 67.0 4.78e-01 100.0% 55.7%
3829768 109.4.1.1444 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_14, TPR_16 0.76 68.0 3.84e-01 100.0% 9.1%
3285629 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.76 67.0 4.12e-01 100.0% 18.9%
4997492 109.4.1.195 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_11 0.76 67.0 4.84e-01 100.0% 51.4%
3309583 604.12.1.65 alpha bundles › Spectrin repeat-like › MIT domain › MIT domain › MIT_ATG1 0.75 64.0 5.45e-01 94.0% 88.7%
5069816 632.18.1.0 alpha bundles › immunoglobulin/albumin-binding domain-like › hypothetical protein PA2901 › hypothetical protein PA2901 0.75 52.0 4.90e-01 72.0% 60.0%
4927533 109.4.1.198 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_12 0.75 64.0 4.54e-01 96.0% 47.7%
3573727 109.4.1.1390 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PF31234 0.75 66.0 4.68e-01 100.0% 55.5%
None 0.75 66.0 3.86e-01 100.0% 13.3%
4165745 3883.1.1.1 alpha bundles › CDP-alcohol phosphotransferase helical bundle domain › CDP-alcohol phosphotransferase helical bundle domain › CDP-alcohol phosphotransferase helical bundle domain › CDP-OH_P_transf 0.74 64.0 4.17e-01 100.0% 33.0%
4985440 604.10.1.0 alpha bundles › Spectrin repeat-like › Enzyme IIa from lactose specific PTS, IIa-lac › Enzyme IIa from lactose specific PTS, IIa-lac 0.74 62.0 5.44e-01 94.0% 90.7%
5030482 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.74 61.0 4.11e-01 92.0% 43.8%
1346823 109.4.1.210 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_19 0.74 61.0 5.70e-01 94.0% 87.5%
3661553 109.7.1.0 alpha superhelices › Repetitive alpha hairpins › Cytochrome c oxidase subunit E › Cytochrome c oxidase subunit E 0.73 65.0 5.33e-01 100.0% 55.6%
3269191 109.4.1.1573 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PF29376 0.72 62.0 4.77e-01 100.0% 99.2%
3168021 604.12.1.2 alpha bundles › Spectrin repeat-like › MIT domain › MIT domain › Vta1 0.71 59.0 5.09e-01 94.0% 71.2%