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MW291017.1QPL14034.1SEA_TURKISHDELIGHT_5__00005

Bact-Vir

MW291017.1__QPL14034.1__SEA_TURKISHDELIGHT_5__00005

Identity

Accession:: MW291017 ↗
Kingdom:: phage

Quality

82.2 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Dolmabahcevirus› Streptomyces_phage_TurkishDelight

TaxID: 2793708

Cluster

Singleton — not in a non-trivial cluster

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 213-355

PDB

Domain cluster: representative

CATH (24)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
7pkwA01	3.10.450.540	Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, ›	0.65	41.0	4.78e-01	83.2%	88.3%
2ch9A01	3.10.450.10	Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, ›	0.65	46.0	5.15e-01	88.1%	92.0%
4ec6A00	3.10.450.540	Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, ›	0.60	44.0	4.95e-01	90.2%	100.0%
1jkgB00	3.10.450.50	Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, ›	0.59	52.0	4.80e-01	95.8%	91.7%
3hx8A00	3.10.450.50	Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, ›	0.56	46.0	4.89e-01	88.1%	96.9%
2imjD01	3.10.450.50	Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, ›	0.56	46.0	4.71e-01	95.8%	89.4%
1q42A00	3.10.450.50	Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, ›	0.55	47.0	4.51e-01	88.8%	96.9%
2cw9A00	3.10.450.240	Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, ›	0.55	47.0	4.32e-01	90.9%	85.2%
5aj3E01	3.30.230.10	Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S5; domain 2 ›	0.55	32.0	4.01e-01	83.2%	100.0%
1uliB00	3.10.450.50	Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, ›	0.54	45.0	4.20e-01	88.8%	89.3%
1jkgA00	3.10.450.50	Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, ›	0.53	44.0	4.53e-01	88.8%	94.2%
3soyA00	3.10.450.50	Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, ›	0.53	44.0	4.45e-01	87.4%	93.0%
3b8lA01	3.10.450.50	Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, ›	0.53	45.0	4.58e-01	90.2%	93.6%
4gb5A00	3.10.450.50	Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, ›	0.53	45.0	4.45e-01	88.8%	91.9%
2b1xB00	3.10.450.50	Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, ›	0.53	44.0	4.23e-01	88.8%	91.6%
4lgqA00	3.10.450.50	Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, ›	0.53	43.0	4.52e-01	88.1%	95.5%
1w18A00	2.115.10.20	Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43	0.52	46.0	3.18e-01	95.8%	56.9%
2bmoB00	3.10.450.50	Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, ›	0.52	44.0	3.94e-01	88.8%	80.4%
3ff0A01	3.10.450.50	Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, ›	0.51	42.0	4.30e-01	88.8%	90.1%
3f9sB00	3.10.450.50	Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, ›	0.51	45.0	4.62e-01	99.3%	98.6%
3kspA00	3.10.450.50	Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, ›	0.50	41.0	4.36e-01	89.5%	96.9%
1p4tA00	2.40.160.20	Mainly Beta › Beta Barrel › Porin ›	0.50	42.0	4.08e-01	88.1%	85.8%
6qwrA01	2.40.160.20	Mainly Beta › Beta Barrel › Porin ›	0.50	41.0	3.75e-01	87.4%	84.7%
2gexA00	3.10.450.50	Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, ›	0.50	41.0	4.15e-01	89.5%	86.3%

ECOD (14)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3277623	243.3.1.0 ↗	a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin	0.74	59.0	6.05e-01	90.9%	85.7%
3885003	243.3.1.1 ↗	a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › Cystatin	0.67	44.0	4.97e-01	88.1%	85.5%
5064585	243.3.1.0 ↗	a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin	0.66	41.0	4.97e-01	84.6%	96.7%
3525853	883.1.1.1 ↗	a+b complex topology › Aha1/BPI domain-like › Aha1/BPI domain-like › Aha1/BPI domain-like › LBP_BPI_CETP	0.63	53.0	5.22e-01	87.4%	84.0%
3263321	243.1.1.0 ↗	a+b two layers › Cystatin-like › NTF2-like › NTF2-like	0.59	49.0	4.89e-01	87.4%	94.5%
3573076	243.1.1.5 ↗	a+b two layers › Cystatin-like › NTF2-like › NTF2-like › Tim44	0.59	49.0	4.27e-01	88.1%	66.2%
3840054	5084.1.1.15 ↗	beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › HP_OMP	0.58	43.0	4.41e-01	99.3%	78.6%
3349123	883.1.1.15 ↗	a+b complex topology › Aha1/BPI domain-like › Aha1/BPI domain-like › Aha1/BPI domain-like › LBP_BPI_CETP+LBP_BPI_CETP_C	0.57	48.0	3.37e-01	89.5%	29.3%
3838651	243.1.1.6 ↗	a+b two layers › Cystatin-like › NTF2-like › NTF2-like › VirB8	0.55	46.0	4.54e-01	88.1%	94.7%
2552604	243.1.1.0 ↗	a+b two layers › Cystatin-like › NTF2-like › NTF2-like	0.55	45.0	4.65e-01	86.7%	96.3%
3381153	243.1.1.24 ↗	a+b two layers › Cystatin-like › NTF2-like › NTF2-like › ARC6-like_IMS	0.55	45.0	4.51e-01	86.7%	95.1%
3870002	883.1.1.15 ↗	a+b complex topology › Aha1/BPI domain-like › Aha1/BPI domain-like › Aha1/BPI domain-like › LBP_BPI_CETP+LBP_BPI_CETP_C	0.53	43.0	3.08e-01	88.8%	29.0%
3613801	5.1.2.0 ↗	beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 5-bladed	0.52	44.0	3.30e-01	93.7%	54.9%
3964096	5084.1.1.4 ↗	beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › Opacity	0.51	42.0	3.91e-01	86.0%	76.0%

D2 medium residues 1-88_190-211

PDB

Domain cluster: representative

ECOD (1)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
55361	4044.1.1.1 ↗	alpha bundles › Helical bundle domain in prismane-like proteins › Helical bundle domain in prismane-like proteins › Helical bundle domain in prismane-like proteins › Prismane	0.60	32.0	3.28e-01	74.5%	50.5%

D3 medium residues 89-189

PDB

Domain cluster: representative

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF16289.12 best	PIN_12	42.1	1.80e-10	81.2%	44.1%

CATH (3)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
4uhiA01	1.10.630.10	Mainly Alpha › Orthogonal Bundle › Cytochrome p450 › Cytochrome P450	0.59	48.0	3.21e-01	90.1%	92.1%
6b04C00	1.10.600.10	Mainly Alpha › Orthogonal Bundle › Farnesyl Diphosphate Synthase › Farnesyl Diphosphate Synthase	0.58	49.0	3.43e-01	94.1%	44.8%
1t10A01	3.40.50.10490	Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glucose-6-phosphate isomerase like protein; domain 1	0.54	44.0	3.06e-01	91.1%	92.2%

ECOD (2)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3587550	162.1.1.0 ↗	alpha bundles › PTS-regulatory domain, PRD › PTS-regulatory domain, PRD › PTS-regulatory domain, PRD	0.53	40.0	3.85e-01	83.2%	86.7%
3187297	109.4.1.356 ↗	alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Fungal_trans	0.51	43.0	2.93e-01	98.0%	92.3%

D4 medium residues 356-415

PDB