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MW291017.1__QPL14048.1__SEA_TURKISHDELIGHT_19__00019

Bact-Vir

MW291017.1__QPL14048.1__SEA_TURKISHDELIGHT_19__00019

Identity

Accession:
MW291017 ↗
Kingdom:
phage

Quality

69.4 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 5-61
PDB
Domain cluster: representative
CATH (31)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2f1fA02 3.30.70.1150 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT-like. Chain A, domain 2 0.74 61.0 5.55e-01 93.0% 79.5%
1earA02 3.30.70.790 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › UreE, C-terminal domain 0.70 58.0 5.49e-01 94.7% 78.3%
1zpwX00 3.30.70.240 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.70 57.0 5.09e-01 93.0% 75.6%
2i8eA01 3.30.70.240 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.69 55.0 5.17e-01 93.0% 93.2%
2yxlA03 3.30.70.1170 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Sun protein; domain 3 0.69 55.0 5.53e-01 91.2% 98.3%
5yppA00 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.68 56.0 4.94e-01 96.5% 83.3%
2bj3D02 3.30.70.1150 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT-like. Chain A, domain 2 0.68 54.0 4.91e-01 93.0% 88.9%
3gqcC01 3.30.70.270 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Reverse transcriptase/Diguanylate cyclase domain 0.68 56.0 4.41e-01 100.0% 75.2%
2yweA04 3.30.70.240 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.67 54.0 4.46e-01 94.7% 57.9%
1gmuA01 3.30.70.790 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › UreE, C-terminal domain 0.66 54.0 5.18e-01 94.7% 80.6%
6lxgA01 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.65 52.0 4.90e-01 94.7% 100.0%
4mz0B05 3.30.70.250 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Malonyl-CoA ACP transacylase, ACP-binding 0.64 52.0 5.06e-01 94.7% 91.0%
4i0wA00 3.30.70.2980 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.64 52.0 4.58e-01 96.5% 62.0%
3pjxA01 3.30.70.270 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Reverse transcriptase/Diguanylate cyclase domain 0.64 53.0 3.90e-01 100.0% 69.1%
1kytA02 3.90.1070.10 Alpha Beta › Alpha-Beta Complex › Hypothetical Protein Ta0175; Chain: A, domain 2 › 0.64 51.0 4.98e-01 91.2% 98.4%
1t94B02 3.30.70.270 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Reverse transcriptase/Diguanylate cyclase domain 0.63 53.0 4.32e-01 100.0% 95.0%
3m4xA01 3.30.70.1170 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Sun protein; domain 3 0.63 52.0 4.61e-01 94.7% 61.4%
1z1dB00 3.40.1310.20 Alpha Beta › 3-Layer(aba) Sandwich › Replication Protein E1; Chain: A, › 0.63 50.0 3.96e-01 93.0% 50.4%
6lpnA04 3.30.70.2740 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.62 51.0 4.46e-01 100.0% 90.5%
2eo5A01 3.90.1150.10 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 0.62 45.0 3.45e-01 82.5% 40.5%
4o5vA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.61 42.0 3.98e-01 73.7% 76.1%
1d1rA00 3.30.780.10 Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor Eif1 › SUI1-like domain 0.60 50.0 4.54e-01 100.0% 68.7%
4x0qA03 3.30.70.370 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.59 47.0 3.73e-01 96.5% 62.2%
1h3dA03 3.30.70.120 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.57 45.0 4.42e-01 94.7% 88.1%
3ncvA02 3.30.1370.100 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › MutL, C-terminal domain, regulatory subdomain 0.57 42.0 3.65e-01 80.7% 63.7%
4i2oA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.56 40.0 3.67e-01 77.2% 80.0%
3qyfA03 1.10.10.1690 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Uncharacterised CRISPR-associated protein family, UPF0236 0.55 38.0 3.79e-01 73.7% 70.5%
2x4hA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.54 37.0 2.96e-01 71.9% 43.4%
4id8A00 3.30.70.20 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.53 41.0 4.05e-01 94.7% 98.5%
3cu7A12 2.60.40.690 Mainly Beta › Sandwich › Immunoglobulin-like › Alpha-macroglobulin, receptor-binding domain 0.52 42.0 3.35e-01 100.0% 63.8%
2fxaA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.50 42.0 3.16e-01 100.0% 64.1%
ECOD (29)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4277197 304.11.1.0 a+b two layers › Alpha-beta plaits › Probable ACP-binding domain of malonyl-CoA ACP transacylase › Probable ACP-binding domain of malonyl-CoA ACP transacylase 0.75 63.0 5.93e-01 94.7% 91.4%
5039174 304.7.1.0 a+b two layers › Alpha-beta plaits › Protease propeptides/inhibitors › Protease propeptides/inhibitors 0.70 59.0 5.82e-01 94.7% 93.3%
4986306 304.22.1.0 a+b two layers › Alpha-beta plaits › Urease metallochaperone UreE, C-terminal domain › Urease metallochaperone UreE, C-terminal domain 0.70 56.0 5.58e-01 94.7% 88.3%
3723051 304.3.1.10 a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain › HMA_PCA1 0.69 57.0 5.41e-01 96.5% 82.9%
5015916 2002.1.1.459 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › PF26257 0.69 58.0 3.62e-01 100.0% 21.7%
4633599 304.11.1.0 a+b two layers › Alpha-beta plaits › Probable ACP-binding domain of malonyl-CoA ACP transacylase › Probable ACP-binding domain of malonyl-CoA ACP transacylase 0.69 57.0 5.36e-01 94.7% 90.0%
4153537 304.22.1.1 a+b two layers › Alpha-beta plaits › Urease metallochaperone UreE, C-terminal domain › Urease metallochaperone UreE, C-terminal domain › UreE_C 0.68 56.0 5.09e-01 94.7% 67.5%
4176322 304.8.1.3 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › NapD 0.67 54.0 4.93e-01 93.0% 77.5%
5037711 304.120.1.0 a+b two layers › Alpha-beta plaits › Ferredoxin-like domain in ThiI › Ferredoxin-like domain in ThiI 0.66 52.0 5.11e-01 93.0% 89.2%
5006888 304.22.1.2 a+b two layers › Alpha-beta plaits › Urease metallochaperone UreE, C-terminal domain › Urease metallochaperone UreE, C-terminal domain › PF26257 0.66 54.0 5.11e-01 94.7% 78.6%
4638289 304.48.1.10 a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › IMS 0.66 54.0 4.15e-01 100.0% 88.0%
4971836 304.48.1.22 a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › GCH_III 0.63 53.0 4.40e-01 100.0% 94.5%
5054411 304.19.1.0 a+b two layers › Alpha-beta plaits › eIF-2-alpha, C-terminal domain › eIF-2-alpha, C-terminal domain 0.63 50.0 4.61e-01 94.7% 86.3%
3726343 304.3.1.10 a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain › HMA_PCA1 0.62 51.0 4.96e-01 96.5% 87.7%
3950768 304.8.1.0 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.61 50.0 4.87e-01 98.2% 90.8%
4935618 101.1.2.141 alpha arrays › HTH › HTH › winged helix domain › HTH_24 0.59 41.0 3.57e-01 75.4% 56.8%
5025259 304.3.1.0 a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain 0.59 46.0 4.53e-01 94.7% 93.8%
2876157 101.1.9.105 alpha arrays › HTH › HTH › Putative DNA-binding domain › PF30176 0.58 42.0 4.35e-01 80.7% 94.3%
5051833 101.1.2.143 alpha arrays › HTH › HTH › winged helix domain › HTH_34 0.58 41.0 3.61e-01 77.2% 61.1%
4965701 304.120.1.0 a+b two layers › Alpha-beta plaits › Ferredoxin-like domain in ThiI › Ferredoxin-like domain in ThiI 0.58 45.0 4.56e-01 93.0% 94.5%
4931868 205.1.1.20 a+b two layers › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › Fer4_15 0.57 45.0 4.33e-01 93.0% 100.0%
4109720 101.1.2.404 alpha arrays › HTH › HTH › winged helix domain › DUF505 0.57 40.0 3.53e-01 77.2% 68.9%
4998740 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.56 39.0 3.53e-01 77.2% 76.7%
3972963 3016.1.1.0 a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases 0.55 40.0 3.87e-01 82.5% 83.8%
4926938 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.54 37.0 3.40e-01 71.9% 67.5%
5036721 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.54 37.0 3.06e-01 73.7% 50.8%
5050369 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.54 37.0 3.38e-01 77.2% 57.8%
5012136 3016.1.1.0 a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases 0.53 39.0 3.97e-01 84.2% 96.4%
4926787 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.53 36.0 3.39e-01 73.7% 69.3%