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MW291017.1__QPL14121.1__SEA_TURKISHDELIGHT_91__00091

Bact-Vir

MW291017.1__QPL14121.1__SEA_TURKISHDELIGHT_91__00091

Identity

Accession:
MW291017 ↗
Kingdom:
phage

Quality

79.9 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 4-72
PDB
Domain cluster: representative
Pfam (2)
AccessionNameScoreE-valueQ covHMM cov
PF02796.22 best HTH_7 24.1 4.40e-05 55.1% 82.2%
PF13384.13 HTH_23 25.4 1.40e-05 53.6% 68.0%
CATH (8)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3zh9B03 1.20.272.10 Mainly Alpha › Up-down Bundle › Zinc Finger, Delta Prime; domain 3 › 0.84 60.0 4.79e-01 75.4% 40.5%
2a6cA00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.80 50.0 4.87e-01 73.9% 57.9%
4nvsA00 3.10.180.10 Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 0.71 53.0 4.06e-01 79.7% 99.4%
3mklA00 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.70 48.0 4.17e-01 71.0% 51.0%
4a6dA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.60 53.0 4.83e-01 98.6% 100.0%
3lstA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.59 45.0 4.28e-01 85.5% 91.9%
2r3sB01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.58 46.0 4.37e-01 87.0% 100.0%
4gvpA01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.57 51.0 3.63e-01 100.0% 60.2%
ECOD (14)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3287232 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.87 65.0 6.33e-01 78.3% 73.3%
3952688 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.84 61.0 5.93e-01 76.8% 69.3%
235968 138.1.1.9 alpha arrays › DNA polymerase III clamp loader subunits, C-terminal domain › DNA polymerase III clamp loader subunits, C-terminal domain › DNA polymerase III clamp loader subunits, C-terminal domain › DNA_pol3_delta_C 0.84 60.0 4.81e-01 75.4% 40.8%
4173484 148.1.2.1 alpha arrays › Histone-like › Histone-related › double Clp-N › Clp_N 0.80 59.0 4.06e-01 78.3% 66.4%
4990647 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.75 50.0 5.66e-01 73.9% 87.3%
3281228 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.75 59.0 6.04e-01 100.0% 89.2%
4952807 101.1.1.60 alpha arrays › HTH › HTH › Three-helical HTH › HTH_23 0.74 55.0 5.34e-01 95.7% 70.7%
3286325 101.1.4.72 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › Sigma70_r4 0.74 67.0 6.38e-01 100.0% 85.0%
3933366 101.1.6.12 alpha arrays › HTH › HTH › TrpR › HTH_23 0.62 46.0 4.67e-01 78.3% 85.7%
3977908 101.1.4.20 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_37 0.61 48.0 4.46e-01 91.3% 71.6%
1159643 101.1.1.17 alpha arrays › HTH › HTH › Three-helical HTH › HTH_7 0.59 47.0 4.75e-01 89.9% 95.8%
3279376 101.1.2.88 alpha arrays › HTH › HTH › winged helix domain › Dimerisation 0.55 44.0 4.02e-01 89.9% 95.8%
5009839 101.1.2.15 alpha arrays › HTH › HTH › winged helix domain › MarR 0.52 41.0 3.31e-01 87.0% 62.9%
3284984 142.1.1.0 alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors 0.50 44.0 3.00e-01 100.0% 35.4%