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MW291017.1__QPL14136.1__SEA_TURKISHDELIGHT_107__00107

Bact-Vir

MW291017.1__QPL14136.1__SEA_TURKISHDELIGHT_107__00107

Identity

Accession:
MW291017 ↗
Kingdom:
phage

Quality

79.1 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 144-255
PDB
Domain cluster: representative
CATH (5)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2jkgA00 3.30.450.30 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Dynein light chain 2a, cytoplasmic 0.65 46.0 4.06e-01 74.1% 53.3%
1vr8A00 3.40.1000.20 Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › TM1622-like 0.57 36.0 3.42e-01 71.4% 51.9%
2asbA01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.55 27.0 3.19e-01 88.4% 65.3%
3cwxA00 3.40.1420.20 Alpha Beta › 3-Layer(aba) Sandwich › Inhibitor of vertebrate lysozyme, Ivy › Pathogenicity island component CagD 0.52 34.0 3.30e-01 80.4% 58.4%
3doaA01 2.30.310.10 Mainly Beta › Roll › ibrinogen binding protein from staphylococcus aureus fold › ibrinogen binding protein from staphylococcus aureus domain 0.50 36.0 3.29e-01 74.1% 93.5%
ECOD (10)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3289546 881.1.1.0 a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like 0.62 45.0 3.89e-01 75.9% 54.1%
5054046 809.2.1.0 a+b two layers › BLIP-like › BT0923-like › BT0923-like 0.59 32.0 4.16e-01 75.0% 100.0%
4952059 809.2.1.0 a+b two layers › BLIP-like › BT0923-like › BT0923-like 0.56 39.0 4.48e-01 99.1% 100.0%
1296460 216.2.1.1 a+b two layers › UBC-like › Thermo-DBP-RP2 C-terminal domain › Thermo-DBP-RP2 C-terminal domain › Thermo-DBP 0.55 42.0 4.28e-01 90.2% 85.8%
3995669 5.1.3.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.55 37.0 2.89e-01 74.1% 31.0%
5054047 243.3.1.0 a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin 0.54 35.0 4.12e-01 78.6% 96.0%
3740622 12.3.1.3 beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › Aldose_epim 0.54 38.0 2.73e-01 72.3% 48.3%
4948814 2008.1.1.0 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like 0.52 45.0 4.04e-01 95.5% 98.8%
3199598 206.1.1.71 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase, Kdo 0.52 37.0 2.75e-01 72.3% 55.6%
None 0.50 35.0 2.38e-01 79.5% 19.3%
D2 high residues 270-366
PDB
CATH (29)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1whvA00 3.30.70.330 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain 0.66 40.0 3.96e-01 95.9% 57.0%
4q5eA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.66 45.0 5.02e-01 97.9% 90.7%
1u02A02 3.30.70.1020 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Trehalose-6-phosphate phosphatase related protein; domain 2 0.64 44.0 4.88e-01 100.0% 92.1%
5cs2A00 3.30.428.10 Alpha Beta › 2-Layer Sandwich › HIT family, subunit A › HIT-like 0.60 50.0 4.34e-01 90.7% 74.8%
3c0wA02 3.10.28.10 Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases 0.59 41.0 4.05e-01 93.8% 67.0%
4h5bA00 3.30.1460.70 Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › 0.59 39.0 3.36e-01 87.6% 42.8%
3zx4A02 3.30.980.20 Alpha Beta › 2-Layer Sandwich › Threonyl-tRNA Synthetase; Chain A, domain 2 › Putative mannosyl-3-phosphoglycerate phosphatase; domain 2 0.58 46.0 4.87e-01 100.0% 95.4%
3kxyJ00 3.30.1460.10 Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › 0.58 38.0 3.47e-01 86.6% 49.6%
6u9hF02 3.30.70.1150 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT-like. Chain A, domain 2 0.57 34.0 3.77e-01 93.8% 75.3%
3fqmA01 2.20.25.210 Mainly Beta › Single Sheet › N-terminal domain of TfIIb › Hepatitis C NS5A, domain 1B 0.56 28.0 3.42e-01 73.2% 73.8%
1lxjA00 3.30.70.930 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.56 35.0 3.47e-01 95.9% 58.3%
6liuC02 3.90.1150.10 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 0.55 38.0 3.68e-01 100.0% 62.1%
2plgA01 3.30.1460.10 Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › 0.54 37.0 3.38e-01 100.0% 50.8%
8k1fC01 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.54 40.0 3.27e-01 79.4% 76.0%
6k5gA01 3.40.50.1580 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nucleoside phosphorylase domain 0.54 48.0 3.55e-01 100.0% 51.3%
3zieD00 3.30.110.150 Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor IF3 › SepF-like protein 0.54 37.0 3.99e-01 100.0% 85.4%
1jyoA00 3.30.1460.10 Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › 0.53 39.0 3.58e-01 100.0% 57.7%
1av5A00 3.30.428.10 Alpha Beta › 2-Layer Sandwich › HIT family, subunit A › HIT-like 0.52 43.0 4.16e-01 97.9% 78.8%
2x7gA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.52 36.0 3.78e-01 80.4% 79.5%
1nf2A02 3.30.1240.10 Alpha Beta › 2-Layer Sandwich › Hypothetical Protein, Haloacid Dehalogenase-like Hydrolase; Chain: A; domain 2 › 0.52 46.0 4.48e-01 100.0% 100.0%
1xkiA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.52 39.0 3.61e-01 80.4% 96.9%
3p04A00 3.30.110.150 Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor IF3 › SepF-like protein 0.52 35.0 3.88e-01 100.0% 89.6%
2o0bA02 3.65.10.10 Alpha Beta › Alpha-beta prism › UDP-n-acetylglucosamine1-carboxyvinyl-transferase; Chain › Enolpyruvate transferase domain 0.51 43.0 3.35e-01 92.8% 90.7%
3zihA00 3.30.110.150 Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor IF3 › SepF-like protein 0.51 35.0 3.83e-01 99.0% 87.3%
7xhzA01 3.30.1240.10 Alpha Beta › 2-Layer Sandwich › Hypothetical Protein, Haloacid Dehalogenase-like Hydrolase; Chain: A; domain 2 › 0.51 45.0 4.21e-01 100.0% 97.6%
2r55A00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.51 40.0 3.21e-01 86.6% 69.2%
3pgvA02 3.30.1240.10 Alpha Beta › 2-Layer Sandwich › Hypothetical Protein, Haloacid Dehalogenase-like Hydrolase; Chain: A; domain 2 › 0.51 46.0 4.58e-01 100.0% 95.0%
4kr6A01 3.30.2130.30 Alpha Beta › 2-Layer Sandwich › VC0802-like › 0.50 40.0 3.35e-01 86.6% 93.6%
2d9iA00 3.30.1370.110 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › 0.50 39.0 3.94e-01 97.9% 83.3%
ECOD (43)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5029481 312.1.1.2 a+b three layers › HIT-like › HIT-related › HIT-related › HIT 0.72 51.0 4.83e-01 73.2% 87.8%
3260113 304.48.1.1 a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › RVT_1 0.70 48.0 4.56e-01 95.9% 61.8%
3670277 3012.1.1.1 a+b two layers › Cof C2 cap domain › Cof C2 cap domain › Cof C2 cap domain › Trehalose_PPase 0.69 49.0 5.49e-01 100.0% 96.0%
3460668 3012.1.1.1 a+b two layers › Cof C2 cap domain › Cof C2 cap domain › Cof C2 cap domain › Trehalose_PPase 0.69 50.0 5.54e-01 100.0% 97.3%
4951829 3012.1.1.1 a+b two layers › Cof C2 cap domain › Cof C2 cap domain › Cof C2 cap domain › Trehalose_PPase 0.69 49.0 5.50e-01 100.0% 97.3%
3450997 3012.1.1.1 a+b two layers › Cof C2 cap domain › Cof C2 cap domain › Cof C2 cap domain › Trehalose_PPase 0.68 50.0 4.98e-01 100.0% 74.0%
3984011 206.1.1.33 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › OspG_kinase 0.66 45.0 3.66e-01 97.9% 38.9%
3709245 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.65 30.0 3.19e-01 100.0% 48.2%
5034952 2006.1.1.3 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › Trehalose_PPase 0.63 47.0 3.44e-01 100.0% 29.1%
3239062 312.1.1.2 a+b three layers › HIT-like › HIT-related › HIT-related › HIT 0.62 45.0 4.14e-01 77.3% 90.0%
3253728 312.1.1.8 a+b three layers › HIT-like › HIT-related › HIT-related › DcpS_C 0.60 45.0 4.12e-01 79.4% 73.1%
3719128 310.3.1.16 a+b two layers › RRF/tRNA synthetase additional domain-like › General secretion pathway protein M (EpsM) periplasmic domain-related › General secretion pathway protein M (EpsM) periplasmic domain-related › PF30974 0.60 50.0 4.89e-01 100.0% 83.8%
4420323 3016.1.1.0 a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases 0.59 38.0 3.96e-01 86.6% 70.0%
3604327 304.8.1.0 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.58 36.0 3.32e-01 94.8% 45.4%
3603067 328.9.1.0 a+b two layers › IF3-like › SepF C-terminal domain › SepF C-terminal domain 0.58 39.0 4.28e-01 100.0% 84.8%
5000990 241.1.1.0 a+b two layers › Type III secretory system chaperone-like › Type III secretory system chaperone › Type III secretory system chaperone 0.57 39.0 3.32e-01 86.6% 43.2%
4486025 206.1.1.14 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › ABC1 0.57 46.0 2.91e-01 86.6% 35.1%
3193779 312.1.1.11 a+b three layers › HIT-like › HIT-related › HIT-related › Ap4A_phos_N 0.57 50.0 4.29e-01 97.9% 91.6%
5028452 328.9.1.0 a+b two layers › IF3-like › SepF C-terminal domain › SepF C-terminal domain 0.56 39.0 4.33e-01 99.0% 92.0%
3807514 2006.1.1.3 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › Trehalose_PPase 0.55 41.0 3.03e-01 99.0% 28.0%
None 0.55 41.0 3.07e-01 100.0% 28.9%
3611534 328.7.1.1 a+b two layers › IF3-like › Smr domain › Smr domain › Smr 0.55 45.0 4.30e-01 86.6% 85.5%
3279654 241.1.1.0 a+b two layers › Type III secretory system chaperone-like › Type III secretory system chaperone › Type III secretory system chaperone 0.55 36.0 3.25e-01 86.6% 47.4%
3709798 328.7.1.0 a+b two layers › IF3-like › Smr domain › Smr domain 0.54 44.0 4.30e-01 86.6% 90.5%
5054494 328.4.1.1 a+b two layers › IF3-like › YhbY-like › YhbY-like › CRS1_YhbY 0.54 37.0 4.13e-01 97.9% 92.0%
4948041 328.9.1.0 a+b two layers › IF3-like › SepF C-terminal domain › SepF C-terminal domain 0.54 38.0 4.17e-01 99.0% 88.7%
3955969 246.2.1.19 a+b four layers › Carbon-nitrogen hydrolase-like › Metallo-dependent phosphatases › Metallo-dependent phosphatases › PGA_cap 0.54 48.0 3.26e-01 100.0% 30.1%
5029717 328.9.1.1 a+b two layers › IF3-like › SepF C-terminal domain › SepF C-terminal domain › SepF 0.54 38.0 4.13e-01 100.0% 88.7%
3354180 328.7.1.1 a+b two layers › IF3-like › Smr domain › Smr domain › Smr 0.54 44.0 4.21e-01 86.6% 80.9%
5027367 328.9.1.1 a+b two layers › IF3-like › SepF C-terminal domain › SepF C-terminal domain › SepF 0.54 38.0 4.10e-01 100.0% 88.7%
4531300 327.19.1.1 a+b two layers › Alpha-lytic protease prodomain-like › DNA mismatch repair protein MutL regulatory subdomain › DNA mismatch repair protein MutL regulatory subdomain › MutL_C 0.54 31.0 3.33e-01 84.5% 63.5%
3376263 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.53 38.0 4.03e-01 94.8% 83.5%
5015317 328.9.1.1 a+b two layers › IF3-like › SepF C-terminal domain › SepF C-terminal domain › SepF 0.53 37.0 3.94e-01 100.0% 82.4%
5046869 328.9.1.1 a+b two layers › IF3-like › SepF C-terminal domain › SepF C-terminal domain › SepF 0.52 37.0 4.04e-01 100.0% 91.3%
3284582 2008.1.1.16 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › Mrr_cat 0.51 39.0 3.42e-01 81.4% 78.7%
3964427 304.132.1.0 a+b two layers › Alpha-beta plaits › ferredoxin-like domain in 2,3-bisphosphoglycerate-independent phosphoglycerate mutase › ferredoxin-like domain in 2,3-bisphosphoglycerate-independent phosphoglycerate mutase 0.51 44.0 3.93e-01 95.9% 71.4%
3782468 328.7.1.0 a+b two layers › IF3-like › Smr domain › Smr domain 0.51 41.0 3.93e-01 85.6% 95.5%
4561975 3349.1.1.1 a+b two layers › DNA polymerase D large subunit DP2 N-terminal domain › DNA polymerase D large subunit DP2 N-terminal domain › DNA polymerase D large subunit DP2 N-terminal domain › PolC_DP2 0.51 44.0 3.12e-01 94.8% 41.4%
4386054 206.1.1.9 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › RIO1 0.51 41.0 3.17e-01 100.0% 40.0%
3941592 3012.1.1.0 a+b two layers › Cof C2 cap domain › Cof C2 cap domain › Cof C2 cap domain 0.51 46.0 4.43e-01 100.0% 98.2%
5023211 310.3.1.25 a+b two layers › RRF/tRNA synthetase additional domain-like › General secretion pathway protein M (EpsM) periplasmic domain-related › General secretion pathway protein M (EpsM) periplasmic domain-related › DUF5402 0.50 41.0 4.00e-01 93.8% 80.0%
3489196 331.3.1.3 a+b two layers › TBP-like › Bet v1-like › Bet v1-like › START 0.50 40.0 3.08e-01 86.6% 66.5%
4032715 3012.1.1.0 a+b two layers › Cof C2 cap domain › Cof C2 cap domain › Cof C2 cap domain 0.50 44.0 4.12e-01 100.0% 96.8%
D3 medium residues 17-58
PDB
Domain cluster: representative
CATH (53)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3kbgA03 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.79 69.0 6.30e-01 100.0% 78.6%
1wgsA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.78 67.0 4.75e-01 100.0% 39.8%
1wzoA01 2.30.30.370 Mainly Beta › Roll › SH3 type barrels. › FAH 0.78 56.0 5.77e-01 100.0% 85.0%
8b2gA01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.77 60.0 5.36e-01 85.7% 100.0%
1whjA00 2.30.30.190 Mainly Beta › Roll › SH3 type barrels. › CAP Gly-rich-like domain 0.77 67.0 5.04e-01 100.0% 63.7%
2fhdA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.76 65.0 5.78e-01 100.0% 83.9%
3lx7A01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.76 65.0 6.37e-01 100.0% 89.1%
1txqA00 2.30.30.190 Mainly Beta › Roll › SH3 type barrels. › CAP Gly-rich-like domain 0.75 64.0 5.39e-01 100.0% 89.2%
2heqA01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.73 62.0 5.82e-01 100.0% 98.1%
1zuyA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.72 63.0 5.69e-01 100.0% 98.3%
6bogA02 2.30.30.930 Mainly Beta › Roll › SH3 type barrels. › 0.72 60.0 5.48e-01 100.0% 81.7%
5kcoA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.72 59.0 5.37e-01 97.6% 79.7%
2ct4A00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.71 62.0 5.26e-01 100.0% 80.0%
2l3rA02 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.70 57.0 4.93e-01 100.0% 79.5%
2eyqA05 2.40.10.170 Mainly Beta › Beta Barrel › Thrombin, subunit H › 0.69 58.0 5.27e-01 100.0% 86.4%
1khiA01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.67 55.0 4.72e-01 100.0% 76.0%
2n88A00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.67 49.0 4.51e-01 83.3% 72.4%
6az1E02 2.40.50.740 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Ribosomal protein S4, central domain 0.66 48.0 4.58e-01 81.0% 100.0%
3be3A00 2.30.30.320 Mainly Beta › Roll › SH3 type barrels. › DUF1653-like domain 0.65 53.0 4.53e-01 100.0% 84.2%
3j7aF02 2.40.50.740 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Ribosomal protein S4, central domain 0.64 45.0 4.38e-01 78.6% 100.0%
2bi0A01 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.63 50.0 3.48e-01 92.9% 92.8%
4bpnW02 2.40.50.740 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Ribosomal protein S4, central domain 0.63 46.0 4.44e-01 81.0% 100.0%
2eqmA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.63 49.0 4.76e-01 100.0% 90.6%
3o0hB02 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.63 52.0 3.90e-01 100.0% 97.4%
4c5wA01 3.30.2020.30 Alpha Beta › 2-Layer Sandwich › NE0471 N-terminal domain-like › 0.63 44.0 3.46e-01 76.2% 93.8%
2ra2B00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.62 49.0 4.65e-01 100.0% 79.3%
1y13A00 3.30.479.10 Alpha Beta › 2-Layer Sandwich › Tetrahydropterin Synthase; Chain A › 6-pyruvoyl tetrahydropterin synthase/QueD 0.62 48.0 3.22e-01 85.7% 57.1%
6y48D01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.61 49.0 3.03e-01 95.2% 42.6%
2eqjA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.61 47.0 4.36e-01 100.0% 68.2%
3cpfA01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.61 47.0 4.33e-01 100.0% 76.9%
2xk0A00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.61 48.0 4.32e-01 100.0% 60.9%
2mysA01 2.30.30.360 Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal 0.61 49.0 4.80e-01 100.0% 85.4%
8c0zE01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.60 49.0 3.65e-01 100.0% 95.4%
5ttjA01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.60 48.0 3.13e-01 97.6% 59.3%
3luuA00 3.30.2020.30 Alpha Beta › 2-Layer Sandwich › NE0471 N-terminal domain-like › 0.60 46.0 3.86e-01 97.6% 83.1%
2x8nA01 3.30.2020.40 Alpha Beta › 2-Layer Sandwich › NE0471 N-terminal domain-like › Uncharacterised protein PF10387, DUF2442 0.59 48.0 3.74e-01 95.2% 82.5%
4ntcA01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.58 49.0 3.26e-01 100.0% 51.2%
3kkjA01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.58 50.0 3.45e-01 100.0% 53.6%
5uaoC00 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.58 48.0 2.76e-01 97.6% 38.3%
2aqjA00 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.58 46.0 2.68e-01 97.6% 40.0%
3c6kA02 2.30.140.10 Mainly Beta › Roll › Spermidine Synthase; Chain: A, domain 2 › Spermidine synthase, tetramerisation domain 0.56 40.0 3.87e-01 85.7% 85.7%
1eigA00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.56 41.0 3.66e-01 90.5% 63.0%
6rjiA03 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.54 39.0 3.72e-01 81.0% 98.1%
2eeiA00 2.30.42.10 Mainly Beta › Roll › Pdz3 Domain › PDZ domain 0.54 41.0 3.24e-01 92.9% 51.9%
3jcuB02 3.10.680.10 Alpha Beta › Roll › Photosystem II CP47 reaction center protein › Photosystem II CP47 reaction center protein 0.54 42.0 2.96e-01 100.0% 32.4%
1gutA00 2.40.50.100 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain 0.53 39.0 3.48e-01 85.7% 73.1%
1b9mA03 2.40.50.100 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain 0.53 40.0 3.60e-01 95.2% 80.3%
4kx7A01 2.60.40.1730 Mainly Beta › Sandwich › Immunoglobulin-like › tricorn interacting facor f3 domain 0.52 44.0 2.84e-01 100.0% 21.5%
2e1bA02 3.30.980.10 Alpha Beta › 2-Layer Sandwich › Threonyl-tRNA Synthetase; Chain A, domain 2 › Threonyl-trna Synthetase; Chain A, domain 2 0.52 41.0 3.11e-01 100.0% 70.5%
1o9aA01 2.10.70.10 Mainly Beta › Ribbon › Complement Module; domain 1 › Complement Module, domain 1 0.52 32.0 3.20e-01 73.8% 56.8%
2rioA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.51 38.0 3.31e-01 95.2% 95.1%
2ivwA01 2.30.30.830 Mainly Beta › Roll › SH3 type barrels. › 0.51 36.0 3.19e-01 88.1% 76.2%
2v3aA03 3.30.390.120 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › 0.50 36.0 3.31e-01 83.3% 54.7%
ECOD (67)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3230533 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.87 72.0 7.06e-01 100.0% 86.7%
4480519 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.86 77.0 6.79e-01 100.0% 76.7%
4138563 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.85 75.0 6.50e-01 100.0% 75.4%
5081247 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.84 74.0 6.60e-01 100.0% 75.0%
4110878 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.82 71.0 6.98e-01 97.6% 100.0%
4241924 4.1.1.93 beta barrels › SH3 › SH3 › SH3 › 40S_S4_C 0.81 71.0 5.51e-01 100.0% 53.3%
3739064 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.79 68.0 5.96e-01 100.0% 86.2%
5026824 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.77 66.0 5.63e-01 100.0% 68.6%
3222223 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.77 58.0 5.04e-01 83.3% 100.0%
3237027 4.1.1.18 beta barrels › SH3 › SH3 › SH3 › CAP_GLY 0.76 66.0 5.08e-01 100.0% 68.4%
4013406 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.76 65.0 5.42e-01 100.0% 92.0%
3189521 4.1.1.18 beta barrels › SH3 › SH3 › SH3 › CAP_GLY 0.76 65.0 5.20e-01 100.0% 81.2%
3475807 4.1.1.92 beta barrels › SH3 › SH3 › SH3 › SH3_9 0.75 65.0 5.28e-01 100.0% 86.3%
4001172 4.1.1.92 beta barrels › SH3 › SH3 › SH3 › SH3_9 0.75 66.0 5.58e-01 100.0% 81.4%
3917043 4.1.1.18 beta barrels › SH3 › SH3 › SH3 › CAP_GLY 0.75 65.0 4.28e-01 100.0% 37.1%
3277860 4.1.1.368 beta barrels › SH3 › SH3 › SH3 › DUF3097_N 0.74 60.0 5.40e-01 100.0% 72.3%
4161673 4.1.1.105 beta barrels › SH3 › SH3 › SH3 › DUF5604 0.73 61.0 4.99e-01 100.0% 56.5%
5034724 4.1.1.482 beta barrels › SH3 › SH3 › SH3 › DUF4314 0.73 58.0 5.39e-01 92.9% 94.5%
2727964 4.1.1.105 beta barrels › SH3 › SH3 › SH3 › DUF5604 0.72 60.0 5.50e-01 100.0% 81.4%
4284709 4.1.1.111 beta barrels › SH3 › SH3 › SH3 › Tudor_RapA 0.72 61.0 5.66e-01 100.0% 83.6%
4505316 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.71 57.0 5.28e-01 100.0% 81.7%
3169636 4.1.1.18 beta barrels › SH3 › SH3 › SH3 › CAP_GLY 0.70 58.0 4.76e-01 100.0% 80.0%
3839369 4.1.1.32 beta barrels › SH3 › SH3 › SH3 › CarD_TRCF_RID 0.69 59.0 4.84e-01 100.0% 63.7%
4071917 4.1.1.111 beta barrels › SH3 › SH3 › SH3 › Tudor_RapA 0.69 56.0 5.39e-01 97.6% 86.0%
3228213 4.8.1.2 beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Chromo_shadow 0.68 53.0 4.68e-01 88.1% 67.7%
3385654 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.68 52.0 3.99e-01 97.6% 64.2%
3500406 109.3.1.0 alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat 0.65 52.0 3.12e-01 100.0% 18.9%
3687350 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.65 53.0 4.99e-01 100.0% 89.1%
4449993 2003.1.2.11 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain 0.65 53.0 3.51e-01 97.6% 50.2%
3917372 4.1.1.101 beta barrels › SH3 › SH3 › SH3 › Tudor_2 0.65 51.0 4.48e-01 100.0% 62.7%
3514191 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.65 56.0 4.27e-01 100.0% 42.0%
3239022 2003.1.3.1 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Nucleotide-binding domain › DAO 0.65 53.0 3.08e-01 95.2% 49.5%
3203103 2003.1.2.15 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FAD_binding_3 0.64 51.0 3.22e-01 95.2% 47.2%
3343842 2003.1.2.15 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FAD_binding_3 0.64 51.0 2.98e-01 95.2% 37.1%
4586306 2003.1.2.16 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FAD_binding_3,NAD_binding_8 0.64 50.0 2.95e-01 95.2% 35.9%
3731630 4.8.1.36 beta barrels › SH3 › Chromo domain-like › Chromo domain-like › DUF7141 0.64 47.0 4.18e-01 78.6% 58.3%
4070152 2003.1.2.15 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FAD_binding_3 0.63 51.0 3.03e-01 97.6% 37.4%
4041343 4.17.1.1 beta barrels › SH3 › GatD N-terminal domain-like › GatD N-terminal domain-like › GatD_N 0.63 49.0 4.79e-01 100.0% 94.0%
3831756 2003.1.2.16 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FAD_binding_3,NAD_binding_8 0.63 51.0 3.23e-01 100.0% 44.1%
3687952 2003.1.2.69 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › NAD_binding_8, Pyr_redox_3 0.62 50.0 2.86e-01 97.6% 23.0%
3199340 2003.1.2.18 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain 0.62 51.0 2.93e-01 100.0% 56.0%
4013709 2003.1.2.58 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Pyr_redox, Pyr_redox_2 0.62 52.0 3.12e-01 100.0% 24.3%
4066000 2003.1.2.15 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FAD_binding_3 0.62 49.0 2.87e-01 95.2% 36.4%
3466109 2003.1.2.16 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FAD_binding_3,NAD_binding_8 0.62 51.0 3.12e-01 100.0% 44.5%
4179896 2003.1.2.7 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FAD_binding_2 0.62 52.0 3.13e-01 97.6% 38.2%
3286035 2003.1.2.69 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › NAD_binding_8, Pyr_redox_3 0.61 52.0 2.96e-01 100.0% 24.8%
3729230 2003.1.2.30 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Pyr_redox_3 0.61 49.0 2.78e-01 95.2% 18.8%
3683580 2003.1.2.16 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FAD_binding_3,NAD_binding_8 0.61 49.0 3.14e-01 100.0% 49.1%
3827907 64.1.1.1 beta meanders › WW domain-like › WW domain › WW domain › WW 0.61 42.0 3.94e-01 73.8% 63.6%
2524023 2003.1.2.15 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FAD_binding_3 0.61 50.0 3.40e-01 97.6% 83.2%
None 0.61 50.0 3.16e-01 100.0% 45.1%
3335386 2003.1.2.15 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FAD_binding_3 0.60 50.0 3.00e-01 100.0% 36.9%
4878245 2003.1.2.30 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Pyr_redox_3 0.60 47.0 3.46e-01 95.2% 75.2%
None 0.60 50.0 3.11e-01 97.6% 46.3%
4187258 2003.1.2.16 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FAD_binding_3,NAD_binding_8 0.60 49.0 3.00e-01 97.6% 43.8%
3188890 2003.1.2.15 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FAD_binding_3 0.60 50.0 3.02e-01 100.0% 47.7%
3969481 2003.1.2.0 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain 0.59 48.0 2.80e-01 100.0% 25.5%
3939881 4.8.1.0 beta barrels › SH3 › Chromo domain-like › Chromo domain-like 0.59 46.0 3.93e-01 90.5% 58.7%
3957533 220.1.1.82 beta barrels › PH domain-like › PH domain-like › PH domain-like › bPH_6 0.59 46.0 3.97e-01 100.0% 80.0%
3734615 2003.1.2.15 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FAD_binding_3 0.58 49.0 2.90e-01 97.6% 55.6%
3349069 2003.1.2.29 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › NAD_binding_8 0.58 46.0 2.95e-01 100.0% 61.7%
3201122 2003.1.2.15 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FAD_binding_3 0.58 46.0 2.86e-01 100.0% 41.3%
3267345 4.1.1.33 beta barrels › SH3 › SH3 › SH3 › Myosin_N 0.56 47.0 4.40e-01 100.0% 76.4%
3696240 2003.1.3.28 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Nucleotide-binding domain › FAD_binding_3 0.56 46.0 2.66e-01 100.0% 44.2%
4292319 2005.1.1.0 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains 0.55 41.0 2.40e-01 95.2% 8.9%
4204596 3744.1.1.1 a+b two layers › Photosystem II antenna protein PsbB insertion domain › Photosystem II antenna protein PsbB insertion domain › Photosystem II antenna protein PsbB insertion domain › PSII 0.54 43.0 3.27e-01 100.0% 46.7%
4139409 375.14.1.0 few secondary structure elements › Rubredoxin-like › Rubredoxin-like domain in leucyl-tRNA synthetase (LS1) › Rubredoxin-like domain in leucyl-tRNA synthetase (LS1) 0.51 37.0 3.72e-01 90.5% 97.5%