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MW291021.1__QPL14338.1__SEA_EHYELIMAYOE_21__00021

Bact-Vir

MW291021.1__QPL14338.1__SEA_EHYELIMAYOE_21__00021

Identity

Accession:
MW291021 ↗
Kingdom:
phage

Quality

77.9 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 48-118
PDB
Domain cluster: representative
CATH (55)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
6vudA01 1.10.132.20 Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › Ribosome-recycling factor 0.77 53.0 4.52e-01 70.4% 82.6%
4kb2A01 1.10.132.20 Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › Ribosome-recycling factor 0.74 53.0 4.54e-01 74.6% 83.5%
4w8pA02 1.20.120.230 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Alpha-catenin/vinculin-like 0.72 52.0 4.29e-01 77.5% 68.5%
3behB01 1.20.120.540 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Voltage-gated potassium channels 0.72 51.0 4.29e-01 74.6% 70.1%
4oydB00 1.10.132.20 Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › Ribosome-recycling factor 0.72 48.0 4.12e-01 70.4% 82.9%
3vuqB00 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.70 63.0 4.69e-01 100.0% 58.5%
1xttB00 3.40.50.2020 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.70 52.0 3.67e-01 78.9% 96.2%
3tl4X02 1.10.10.2420 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › 0.68 48.0 4.87e-01 74.6% 76.4%
5u56A02 1.20.1050.10 Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › 0.68 51.0 4.45e-01 81.7% 94.6%
5j1gA00 1.20.58.60 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.67 49.0 3.47e-01 78.9% 42.5%
2e55A00 3.40.50.2020 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.67 49.0 3.54e-01 78.9% 94.2%
3woyA00 1.25.10.10 Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant 0.65 55.0 3.79e-01 94.4% 30.5%
2nn4A00 1.10.287.760 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › YqgQ-like 0.65 45.0 4.80e-01 77.5% 82.3%
3bjdA01 1.10.1240.20 Mainly Alpha › Orthogonal Bundle › Methyltransferase, Methionine Synthase (B12-binding Domains); Chain A, domain 1 › Lytic transglycosylase, superhelical linker domain 0.64 54.0 5.13e-01 97.2% 87.5%
1wn0A00 1.20.120.160 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › HPT domain 0.62 47.0 3.86e-01 81.7% 51.1%
5dikA00 1.20.1290.10 Mainly Alpha › Up-down Bundle › AhpD-like › AhpD-like 0.62 53.0 4.61e-01 98.6% 66.1%
2w3cA02 1.25.10.10 Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant 0.62 54.0 3.61e-01 100.0% 56.3%
2qw6D00 1.20.272.10 Mainly Alpha › Up-down Bundle › Zinc Finger, Delta Prime; domain 3 › 0.61 52.0 4.94e-01 98.6% 82.6%
3zheA02 1.25.40.760 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › 0.61 53.0 3.85e-01 98.6% 54.6%
1cmjA00 1.10.630.10 Mainly Alpha › Orthogonal Bundle › Cytochrome p450 › Cytochrome P450 0.61 43.0 2.70e-01 74.6% 35.3%
3o4zA02 1.25.40.720 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tel2 C-terminal domain 0.61 52.0 3.86e-01 98.6% 59.3%
2bnlC00 1.10.490.10 Mainly Alpha › Orthogonal Bundle › Globin-like › Globins 0.61 52.0 4.31e-01 100.0% 74.6%
1bgfA00 1.10.532.10 Mainly Alpha › Orthogonal Bundle › Transcription Factor, Stat-4 › STAT transcription factor, N-terminal domain 0.60 43.0 3.58e-01 74.6% 62.1%
2b1eA04 1.20.1280.170 Mainly Alpha › Up-down Bundle › Monooxygenase › Exocyst complex component Exo70 0.60 50.0 4.27e-01 97.2% 85.0%
3axjB01 1.20.58.190 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Translin; domain 1 0.60 51.0 4.06e-01 97.2% 66.5%
2es9A00 1.20.1290.30 Mainly Alpha › Up-down Bundle › AhpD-like › 0.60 51.0 4.61e-01 97.2% 77.0%
4c0eA01 1.25.40.790 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › 0.60 51.0 3.46e-01 98.6% 29.3%
1anxA04 1.10.220.10 Mainly Alpha › Orthogonal Bundle › Annexin V; domain 1 › Annexin 0.59 50.0 4.98e-01 95.8% 94.4%
1bd3A00 3.40.50.2020 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.59 53.0 3.67e-01 100.0% 37.5%
3ck6C02 1.20.58.340 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Magnesium transport protein CorA, transmembrane region 0.59 42.0 3.60e-01 76.1% 76.5%
3vhlA02 1.20.58.740 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › DOCK DHR2 domain, lobe C 0.59 49.0 4.22e-01 97.2% 91.7%
1oqcA00 1.20.120.310 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › ERV/ALR sulfhydryl oxidase domain 0.58 43.0 3.82e-01 81.7% 83.0%
5z62E00 1.25.40.40 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Cytochrome c oxidase, subunit Va/VI 0.58 48.0 4.30e-01 98.6% 65.1%
4hojA02 1.20.1050.10 Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › 0.58 52.0 4.56e-01 98.6% 69.9%
1rz4A01 1.25.40.250 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › ARM repeat; domain 1 0.58 48.0 4.12e-01 97.2% 56.7%
2gzaB02 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.57 52.0 3.68e-01 100.0% 71.8%
6n2nA01 3.40.920.10 Alpha Beta › 3-Layer(aba) Sandwich › Pyruvate-ferredoxin Oxidoreductase; domain 3 › Pyruvate-ferredoxin oxidoreductase, PFOR, domain III 0.57 50.0 3.79e-01 100.0% 97.2%
1ls1A01 1.20.120.140 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › SRP54, nucleotide-binding domain 0.57 41.0 3.89e-01 77.5% 65.2%
3pe0A02 1.20.58.60 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.57 40.0 3.59e-01 74.6% 83.0%
2fm8C01 1.10.4150.10 Mainly Alpha › Orthogonal Bundle › SipA N-terminal domain-like › SipA N-terminal domain-like 0.57 41.0 3.01e-01 76.1% 37.4%
1n00A03 1.10.220.10 Mainly Alpha › Orthogonal Bundle › Annexin V; domain 1 › Annexin 0.56 47.0 4.71e-01 97.2% 95.9%
2c0kB00 1.10.490.10 Mainly Alpha › Orthogonal Bundle › Globin-like › Globins 0.56 40.0 3.23e-01 74.6% 84.6%
3tviA01 3.40.1160.10 Alpha Beta › 3-Layer(aba) Sandwich › Carbamate kinase › Acetylglutamate kinase-like 0.56 47.0 3.21e-01 94.4% 44.1%
1i5eA00 3.40.50.2020 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.56 50.0 3.59e-01 100.0% 39.9%
2mabA00 1.10.10.1350 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Spidroin domain, C-terminal domain 0.56 45.0 4.04e-01 93.0% 85.3%
3h9pA00 1.10.4200.10 Mainly Alpha › Orthogonal Bundle › Triphosphoribosyl-dephospho-CoA protein › Triphosphoribosyl-dephospho-CoA protein 0.56 48.0 3.49e-01 100.0% 37.2%
7ccmB01 1.10.437.10 Mainly Alpha › Orthogonal Bundle › Apoptosis Regulator Bcl-x › Blc2-like 0.56 46.0 3.84e-01 97.2% 58.0%
1fafA00 1.10.287.110 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › DnaJ domain 0.56 38.0 3.75e-01 71.8% 64.6%
4dxwA02 1.10.287.70 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.55 39.0 3.45e-01 77.5% 49.1%
1cxzB00 1.10.287.160 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HR1 repeat 0.54 38.0 3.58e-01 73.2% 100.0%
4epzA00 1.25.40.810 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › UpxZ 0.54 45.0 3.64e-01 100.0% 70.8%
2g47A03 3.30.830.10 Alpha Beta › 2-Layer Sandwich › Cytochrome Bc1 Complex; Chain A, domain 1 › Metalloenzyme, LuxS/M16 peptidase-like 0.52 43.0 3.16e-01 98.6% 70.0%
1bccB02 3.30.830.10 Alpha Beta › 2-Layer Sandwich › Cytochrome Bc1 Complex; Chain A, domain 1 › Metalloenzyme, LuxS/M16 peptidase-like 0.52 36.0 2.77e-01 73.2% 72.4%
2x1dA02 1.10.10.2120 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › 0.52 35.0 3.50e-01 70.4% 71.6%
1r1dA00 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.51 40.0 2.87e-01 90.1% 41.7%
ECOD (40)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
2597170 310.2.1.1 a+b two layers › RRF/tRNA synthetase additional domain-like › Ribosome recycling factor, RRF › Ribosome recycling factor, RRF › RRF 0.75 53.0 3.88e-01 74.6% 89.7%
4447311 310.2.1.1 a+b two layers › RRF/tRNA synthetase additional domain-like › Ribosome recycling factor, RRF › Ribosome recycling factor, RRF › RRF 0.75 53.0 3.90e-01 74.6% 92.2%
3961786 310.2.1.1 a+b two layers › RRF/tRNA synthetase additional domain-like › Ribosome recycling factor, RRF › Ribosome recycling factor, RRF › RRF 0.74 53.0 3.83e-01 74.6% 89.7%
3746634 604.1.1.1 alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › Spectrin 0.72 53.0 4.38e-01 77.5% 72.0%
3498224 109.46.1.1 alpha superhelices › Repetitive alpha hairpins › Helical domain in TOPLESS related protein 2 (TPR2) › Helical domain in TOPLESS related protein 2 (TPR2) › CTLH 0.72 50.0 3.84e-01 73.2% 31.5%
4340549 3236.1.1.5 alpha complex topology › Cation-proton antiporter › Cation-proton antiporter (CPA) › Cation-proton antiporter (CPA) › Na_H_antiport_1 0.71 57.0 3.53e-01 88.7% 20.0%
3234099 101.1.1.75 alpha arrays › HTH › HTH › Three-helical HTH › HTH_48 0.70 52.0 5.45e-01 83.1% 87.7%
3766260 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.70 59.0 4.05e-01 94.4% 45.3%
3200626 310.2.1.1 a+b two layers › RRF/tRNA synthetase additional domain-like › Ribosome recycling factor, RRF › Ribosome recycling factor, RRF › RRF 0.69 50.0 3.59e-01 76.1% 90.0%
3373966 109.4.1.414 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › MMS19_N 0.68 57.0 3.65e-01 93.0% 20.9%
3807337 109.4.1.414 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › MMS19_N 0.67 57.0 4.03e-01 94.4% 32.4%
3553985 109.4.1.148 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › EST1_DNA_bind,EST1 0.67 58.0 3.46e-01 98.6% 18.7%
3834344 109.4.1.22 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Adaptin_N 0.66 58.0 3.54e-01 100.0% 17.0%
5049536 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.66 58.0 5.01e-01 100.0% 64.3%
3266579 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.66 57.0 3.81e-01 98.6% 27.7%
3690261 109.4.1.134 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › SPIN90_LRD 0.66 56.0 3.55e-01 98.6% 31.0%
3256551 109.4.1.1323 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_IMB1 0.65 55.0 3.43e-01 94.4% 28.3%
3238309 101.1.1.75 alpha arrays › HTH › HTH › Three-helical HTH › HTH_48 0.65 52.0 5.37e-01 87.3% 95.4%
4187493 603.1.1.103 alpha bundles › STAT-like › t-snare proteins › t-snare proteins › PF29732 0.64 53.0 4.20e-01 91.5% 65.5%
3313975 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.64 57.0 3.85e-01 100.0% 40.8%
3810902 109.4.1.575 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › DUF577 0.63 55.0 4.23e-01 100.0% 100.0%
5074875 181.1.1.1 alpha bundles › Domain of the SRP/SRP receptor G proteins-like › Domain of the SRP/SRP receptor G-proteins › Domain of the SRP/SRP receptor G-proteins › SRP54_N 0.63 46.0 4.31e-01 78.9% 82.2%
3222099 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.63 54.0 4.26e-01 98.6% 52.3%
4168740 563.1.1.1 alpha bundles › ATPD N-terminal domain-like › N-terminal domain of the delta subunit of the F1F0-ATP synthase › N-terminal domain of the delta subunit of the F1F0-ATP synthase › OSCP 0.63 43.0 3.21e-01 73.2% 28.3%
5074457 1030.1.1.0 alpha duplicates or obligate multimers › Crispr-associated protein Csm2 › Crispr-associated protein Csm2 › Crispr-associated protein Csm2 0.62 45.0 3.97e-01 76.1% 92.4%
4622749 603.1.1.0 alpha bundles › STAT-like › t-snare proteins › t-snare proteins 0.62 45.0 4.05e-01 78.9% 86.7%
4680446 3914.1.1.4 alpha bundles › TMEM16 lipid scramblase transmembrane domain › TMEM16 lipid scramblase transmembrane domain › TMEM16 lipid scramblase transmembrane domain › TMC 0.62 52.0 3.24e-01 100.0% 26.0%
3784813 621.1.1.7 alpha bundles › Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain › Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain › Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain › EMC6 0.62 44.0 4.06e-01 77.5% 78.6%
5042713 181.1.1.1 alpha bundles › Domain of the SRP/SRP receptor G proteins-like › Domain of the SRP/SRP receptor G-proteins › Domain of the SRP/SRP receptor G-proteins › SRP54_N 0.61 45.0 4.27e-01 78.9% 87.1%
4948728 181.1.1.1 alpha bundles › Domain of the SRP/SRP receptor G proteins-like › Domain of the SRP/SRP receptor G-proteins › Domain of the SRP/SRP receptor G-proteins › SRP54_N 0.60 42.0 3.90e-01 74.6% 58.9%
3648733 310.2.1.1 a+b two layers › RRF/tRNA synthetase additional domain-like › Ribosome recycling factor, RRF › Ribosome recycling factor, RRF › RRF 0.60 44.0 3.27e-01 80.3% 92.4%
4929833 181.1.1.1 alpha bundles › Domain of the SRP/SRP receptor G proteins-like › Domain of the SRP/SRP receptor G-proteins › Domain of the SRP/SRP receptor G-proteins › SRP54_N 0.60 44.0 4.12e-01 78.9% 82.2%
3421726 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.60 52.0 3.49e-01 97.2% 44.4%
4995419 592.2.1.0 alpha arrays › PWI domain-like › YugE-like › YugE-like 0.58 42.0 4.02e-01 77.5% 71.8%
5041310 2004.1.3.1 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › Pyruvate-ferredoxin oxidoreductase, PFOR, domain III › POR 0.57 49.0 3.47e-01 100.0% 90.8%
3706550 109.4.1.72 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Vps16_C 0.57 46.0 3.48e-01 91.5% 40.5%
3703986 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.57 48.0 3.58e-01 100.0% 51.2%
4982919 101.1.10.0 alpha arrays › HTH › HTH › Cyclin-like 0.56 44.0 3.84e-01 88.7% 72.2%
4026181 138.1.1.0 alpha arrays › DNA polymerase III clamp loader subunits, C-terminal domain › DNA polymerase III clamp loader subunits, C-terminal domain › DNA polymerase III clamp loader subunits, C-terminal domain 0.53 46.0 4.17e-01 100.0% 75.0%
3215718 5069.1.3.0 alpha bundles › Transmembrane heme-binding four-helical bundle › Transmembrane heme-binding four-helical bundle › Fumarate reductase respiratory complex transmembrane subunits 0.52 47.0 4.56e-01 100.0% 91.3%