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MW291021.1__QPL14612.1__SEA_EHYELIMAYOE_307__00295

Bact-Vir

MW291021.1__QPL14612.1__SEA_EHYELIMAYOE_307__00295

Identity

Accession:
MW291021 ↗
Kingdom:
phage

Quality

82.2 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Streptomyces_phage_EhyElimayoE

TaxID: 2793706

Cluster

View cluster (2 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 5-133
PDB
Domain cluster: rep: OR553905.1__WNN95096.1__SEA_MAGRITTE_145__00119__D14-123
CATH (17)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4ccvA00 3.10.450.10 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.61 48.0 5.05e-01 83.7% 90.4%
2obdA02 3.15.10.10 Alpha Beta › Super Roll › Bactericidal permeability-increasing protein; domain 1 › Bactericidal permeability-increasing protein; domain 1 0.60 46.0 4.03e-01 80.6% 69.8%
1aq3A00 3.30.380.10 Alpha Beta › 2-Layer Sandwich › MS2 Viral Coat Protein › MS2 Viral Coat Protein 0.59 36.0 3.66e-01 83.7% 60.5%
1bxwA00 2.40.160.20 Mainly Beta › Beta Barrel › Porin › 0.59 45.0 4.13e-01 82.9% 61.0%
1gyvA00 2.60.40.1230 Mainly Beta › Sandwich › Immunoglobulin-like › Gamma-adaptin ear (GAE) domain 0.58 36.0 3.74e-01 96.9% 65.0%
1q42A00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.58 45.0 4.18e-01 81.4% 98.1%
2vf9A00 3.30.380.10 Alpha Beta › 2-Layer Sandwich › MS2 Viral Coat Protein › MS2 Viral Coat Protein 0.57 35.0 3.56e-01 83.7% 61.1%
4l9cA00 3.40.1000.30 Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › 0.56 39.0 3.72e-01 97.7% 61.3%
3zpmA00 3.15.10.10 Alpha Beta › Super Roll › Bactericidal permeability-increasing protein; domain 1 › Bactericidal permeability-increasing protein; domain 1 0.56 44.0 3.73e-01 82.9% 66.8%
3wlvA00 3.10.270.10 Alpha Beta › Roll › Urate Oxidase › Urate Oxidase; 0.54 41.0 3.20e-01 82.2% 55.4%
4afkA00 2.40.160.100 Mainly Beta › Beta Barrel › Porin › 0.54 41.0 2.89e-01 81.4% 25.6%
2obdA01 3.15.20.10 Alpha Beta › Super Roll › Bactericidal permeability-increasing protein; domain 2 › Bactericidal permeability-increasing protein; domain 2 0.53 42.0 3.25e-01 82.9% 46.3%
2kdgA00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.52 27.0 2.99e-01 73.6% 61.0%
4zboC00 2.40.400.10 Mainly Beta › Beta Barrel › Acetoacetate decarboxylase-like › Acetoacetate decarboxylase-like 0.52 42.0 3.41e-01 88.4% 77.8%
1n9eA01 2.70.98.20 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › Copper amine oxidase, catalytic domain 0.51 43.0 2.87e-01 89.9% 65.4%
3aa0B02 3.90.1150.210 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › F-actin capping protein, beta subunit 0.51 42.0 3.95e-01 97.7% 74.2%
1fx3B00 3.10.420.10 Alpha Beta › Roll › Bacterial Protein-export protein SecB › SecB-like 0.51 37.0 3.57e-01 77.5% 66.4%
ECOD (19)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4020255 243.1.1.26 ↗ a+b two layers › Cystatin-like › NTF2-like › NTF2-like › SnoaL_4 0.60 49.0 4.02e-01 86.8% 70.2%
3782746 216.1.1.0 ↗ a+b two layers › UBC-like › UBC-like › UBC-like 0.59 37.0 3.96e-01 76.0% 71.8%
5059784 243.1.1.0 ↗ a+b two layers › Cystatin-like › NTF2-like › NTF2-like 0.59 40.0 4.75e-01 71.3% 100.0%
2658868 265.1.1.1 ↗ a+b two layers › RNA bacteriophage capsid protein › RNA bacteriophage capsid protein › RNA bacteriophage capsid protein › Levi_coat 0.58 38.0 3.84e-01 83.7% 64.2%
169039 265.1.1.1 ↗ a+b two layers › RNA bacteriophage capsid protein › RNA bacteriophage capsid protein › RNA bacteriophage capsid protein › Levi_coat 0.57 35.0 3.56e-01 83.7% 61.1%
3977398 5084.1.1.16 ↗ beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › Ail_Lom 0.57 44.0 4.13e-01 82.9% 72.5%
4174055 5084.1.1.0 ↗ beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like 0.56 43.0 3.88e-01 82.9% 59.8%
3344740 883.1.1.9 ↗ a+b complex topology › Aha1/BPI domain-like › Aha1/BPI domain-like › Aha1/BPI domain-like › SMP_LBD 0.55 43.0 3.65e-01 82.9% 65.5%
3593285 883.1.1.0 ↗ a+b complex topology › Aha1/BPI domain-like › Aha1/BPI domain-like › Aha1/BPI domain-like 0.54 42.0 3.95e-01 81.4% 79.1%
3169657 4099.1.1.47 ↗ a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like › PF30282 0.53 39.0 4.08e-01 95.3% 85.2%
3177363 11.1.5.134 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f › PF29914 0.52 31.0 2.94e-01 83.7% 49.3%
3624852 883.1.1.10 ↗ a+b complex topology › Aha1/BPI domain-like › Aha1/BPI domain-like › Aha1/BPI domain-like › SMP_C2CD2L 0.51 41.0 3.66e-01 86.0% 80.0%
3925088 7026.1.1.0 ↗ beta meanders › N-terminal region of lipid transporter Vps13 › N-terminal region of lipid transporter Vps13 › N-terminal region of lipid transporter Vps13 0.51 39.0 3.29e-01 79.8% 51.8%
3850089 241.15.1.5 ↗ a+b two layers › Type III secretory system chaperone-like › FP (Fbxo7/PI31) dimerization domain › FP (Fbxo7/PI31) dimerization domain › RM5_Med14 0.51 38.0 3.97e-01 97.7% 87.0%
3607856 330.1.1.0 ↗ a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like 0.51 37.0 3.80e-01 96.1% 77.6%
4459947 230.1.1.0 ↗ a+b two layers › T-fold › Tetrahydrobiopterin biosynthesis enzymes-like › Tetrahydrobiopterin biosynthesis enzymes-like 0.51 36.0 3.44e-01 73.6% 100.0%
3173251 4051.1.1.1 ↗ a+b two layers › a+b domain in Capz › a+b domain in Capz › a+b domain in Capz › F_actin_cap_B 0.51 42.0 3.92e-01 100.0% 70.6%
4290771 230.1.1.1 ↗ a+b two layers › T-fold › Tetrahydrobiopterin biosynthesis enzymes-like › Tetrahydrobiopterin biosynthesis enzymes-like › Uricase 0.50 36.0 3.43e-01 75.2% 99.4%
3475749 245.1.1.0 ↗ a+b two layers › Ribonuclease PH domain 2-like › Ribonuclease PH domain 2 › Ribonuclease PH domain 2 0.50 28.0 3.01e-01 82.9% 63.0%