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MW302330.1__QTJ62987.1__X__00009
Bact-VirMW302330.1__QTJ62987.1__X__00009
Identity
- Accession:
- MW302330 ↗
- Kingdom:
- phage
Quality
91.0
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 8-75
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF14201.12 best | DUF4318 | 45.7 | 7.70e-12 | 100.0% | 83.3% |
CATH (39)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2kwbA00 | 2.170.150.10 | Mainly Beta › Beta Complex › Metal Binding Protein, Guanine Nucleotide Exchange Factor; Chain A › Metal Binding Protein, Guanine Nucleotide Exchange Factor; Chain A | 0.65 | 57.0 | 4.20e-01 | 100.0% | 78.1% |
| 2laeA00 | 3.30.310.170 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Outer membrane protein assembly factor BamC | 0.64 | 56.0 | 4.71e-01 | 100.0% | 66.9% |
| 1b7yB05 | 3.30.930.10 | Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 | 0.64 | 56.0 | 4.10e-01 | 100.0% | 47.6% |
| 2pokA01 | 3.40.630.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Zn peptidases | 0.63 | 52.0 | 3.50e-01 | 95.6% | 75.0% |
| 3rt0C00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.61 | 54.0 | 4.07e-01 | 100.0% | 61.6% |
| 3zigA00 | 3.30.110.150 | Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor IF3 › SepF-like protein | 0.61 | 42.0 | 3.93e-01 | 70.6% | 89.0% |
| 3oh8A01 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.60 | 51.0 | 4.14e-01 | 100.0% | 75.7% |
| 5mu3B00 | 3.40.50.12050 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.60 | 46.0 | 3.51e-01 | 86.8% | 35.0% |
| 2qpvA00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.60 | 50.0 | 4.16e-01 | 100.0% | 72.0% |
| 3b33A00 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.60 | 54.0 | 4.57e-01 | 100.0% | 84.4% |
| 1qyaB01 | 3.10.310.10 | Alpha Beta › Roll › Diaminopimelate Epimerase; Chain A, domain 1 › Diaminopimelate Epimerase; Chain A, domain 1 | 0.60 | 42.0 | 3.36e-01 | 100.0% | 35.4% |
| 3o6qA02 | 3.30.70.2720 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.58 | 44.0 | 3.82e-01 | 85.3% | 99.1% |
| 4lgvD02 | 3.30.360.10 | Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 | 0.58 | 48.0 | 3.37e-01 | 100.0% | 84.2% |
| 5oyhD00 | 3.30.70.1230 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Nucleotide cyclase, GGDEF domain | 0.58 | 44.0 | 3.23e-01 | 82.4% | 39.5% |
| 3q6aB00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.57 | 48.0 | 3.99e-01 | 100.0% | 67.9% |
| 5wceA02 | 3.10.150.10 | Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 | 0.57 | 40.0 | 3.31e-01 | 75.0% | 77.5% |
| 7snsB01 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.56 | 48.0 | 3.73e-01 | 100.0% | 82.7% |
| 3n0qA01 | 3.90.380.10 | Alpha Beta › Alpha-Beta Complex › Naphthalene 1,2-dioxygenase Alpha Subunit; Chain A, domain 1 › Naphthalene 1,2-dioxygenase Alpha Subunit; Chain A, domain 1 | 0.56 | 47.0 | 3.24e-01 | 100.0% | 52.8% |
| 4bjjB00 | 2.60.40.4370 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.56 | 46.0 | 4.28e-01 | 91.2% | 88.2% |
| 2hzmG01 | 3.30.310.180 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › | 0.55 | 44.0 | 3.83e-01 | 100.0% | 54.8% |
| 3h6qA00 | 2.80.10.50 | Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › | 0.55 | 45.0 | 3.50e-01 | 95.6% | 67.9% |
| 2m89A00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.55 | 46.0 | 3.84e-01 | 100.0% | 72.4% |
| 2w5eA01 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.55 | 35.0 | 3.57e-01 | 100.0% | 66.2% |
| 2yj6A02 | 3.40.1110.10 | Alpha Beta › 3-Layer(aba) Sandwich › Calcium-transporting ATPase, cytoplasmic domain N › Calcium-transporting ATPase, cytoplasmic domain N | 0.55 | 45.0 | 4.11e-01 | 94.1% | 83.2% |
| 3sluA02 | 3.10.450.350 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.55 | 40.0 | 3.29e-01 | 80.9% | 70.1% |
| 3k6yA01 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.54 | 34.0 | 3.11e-01 | 100.0% | 45.7% |
| 5nfiB02 | 2.60.40.2090 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.54 | 40.0 | 3.34e-01 | 83.8% | 88.0% |
| 1mbmA01 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.54 | 33.0 | 3.26e-01 | 100.0% | 53.9% |
| 6yiiA01 | 3.30.70.1230 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Nucleotide cyclase, GGDEF domain | 0.53 | 45.0 | 3.13e-01 | 94.1% | 65.8% |
| 2w4yA00 | 2.40.160.220 | Mainly Beta › Beta Barrel › Porin › | 0.53 | 39.0 | 3.33e-01 | 80.9% | 55.7% |
| 1vw4M01 | 2.30.30.790 | Mainly Beta › Roll › SH3 type barrels. › | 0.53 | 39.0 | 3.23e-01 | 80.9% | 60.6% |
| 2dk6A01 | 3.30.720.50 | Alpha Beta › 2-Layer Sandwich › Signal recognition particle alu RNA binding heterodimer, srp9/1 › | 0.53 | 41.0 | 3.77e-01 | 88.2% | 76.6% |
| 1xezA02 | 2.70.240.20 | Mainly Beta › Distorted Sandwich › Leukocidin-like › Leukocidin/Hemolysin toxin, cytolysin domain | 0.53 | 42.0 | 2.70e-01 | 92.6% | 21.1% |
| 2gzaA01 | 3.30.450.90 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › | 0.52 | 44.0 | 3.74e-01 | 91.2% | 88.0% |
| 2f7lA04 | 3.30.310.50 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Alpha-D-phosphohexomutase, C-terminal domain | 0.52 | 40.0 | 3.85e-01 | 100.0% | 72.9% |
| 3upuA03 | 2.30.30.780 | Mainly Beta › Roll › SH3 type barrels. › | 0.52 | 37.0 | 3.05e-01 | 76.5% | 95.4% |
| 4b0eD00 | 3.10.20.410 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › PapC, N-terminal domain | 0.52 | 44.0 | 3.94e-01 | 100.0% | 74.0% |
| 3nhqA02 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.51 | 45.0 | 3.81e-01 | 100.0% | 72.3% |
| 1wc1C00 | 3.30.70.1230 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Nucleotide cyclase, GGDEF domain | 0.51 | 46.0 | 3.31e-01 | 98.5% | 52.6% |
ECOD (42)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4953412 | 881.1.1.0 ↗ | a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like | 0.66 | 59.0 | 4.80e-01 | 100.0% | 54.4% |
| 4682490 | 325.1.7.0 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif | 0.65 | 48.0 | 5.26e-01 | 100.0% | 96.4% |
| 4609138 | 331.4.1.0 ↗ | a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 | 0.65 | 51.0 | 4.05e-01 | 100.0% | 40.0% |
| 4141487 | 325.1.7.0 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif | 0.63 | 46.0 | 5.09e-01 | 100.0% | 96.4% |
| 3785729 | 59.1.1.5 ↗ | beta complex topology › triple barrel › triple barrel › Rap30/74 interaction domains-like › Dcc1 | 0.62 | 46.0 | 4.17e-01 | 77.9% | 84.4% |
| 4560753 | 212.1.1.0 ↗ | a+b two layers › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like | 0.62 | 45.0 | 3.89e-01 | 79.4% | 53.9% |
| 4586383 | 325.1.7.0 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif | 0.62 | 47.0 | 3.44e-01 | 100.0% | 31.4% |
| 4323155 | 331.4.1.0 ↗ | a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 | 0.61 | 51.0 | 4.63e-01 | 100.0% | 67.0% |
| 3282089 | 331.3.1.0 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like | 0.61 | 52.0 | 3.97e-01 | 100.0% | 55.9% |
| 4932491 | 221.1.2.7 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Alpha-L RNA-binding motif › RS4NT | 0.61 | 51.0 | 4.35e-01 | 94.1% | 85.5% |
| 3723461 | 4099.1.1.9 ↗ | a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like › Med27 | 0.60 | 47.0 | 3.75e-01 | 86.8% | 42.1% |
| 3445964 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.60 | 45.0 | 3.09e-01 | 83.8% | 32.8% |
| 4938317 | 331.2.1.0 ↗ | a+b two layers › TBP-like › Phosphoglucomutase, C-terminal domain › Phosphoglucomutase, C-terminal domain | 0.59 | 46.0 | 4.39e-01 | 100.0% | 70.6% |
| 4567929 | 5.1.4.169 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_RSE1_2nd | 0.59 | 48.0 | 3.04e-01 | 91.2% | 30.0% |
| 4995617 | 331.2.1.1 ↗ | a+b two layers › TBP-like › Phosphoglucomutase, C-terminal domain › Phosphoglucomutase, C-terminal domain › PGM_PMM_IV | 0.59 | 47.0 | 4.44e-01 | 100.0% | 71.9% |
| 3961706 | 4.1.1.161 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF4178 | 0.59 | 45.0 | 4.57e-01 | 83.8% | 95.4% |
| 4891197 | 3794.1.1.7 ↗ | a+b two layers › Methylcrotonyl-CoA carboxylase alpha-subunit BT domain-related › Methylcrotonyl-CoA carboxylase alpha-subunit BT domain-related › Barrel domain in methylcrotonyl-CoA carboxylase alpha-subunit › Biotin_lipoyl | 0.58 | 43.0 | 3.68e-01 | 79.4% | 84.1% |
| 3590646 | 101.1.2.16 ↗ | alpha arrays › HTH › HTH › winged helix domain › Rep3_N | 0.58 | 40.0 | 3.33e-01 | 72.1% | 91.2% |
| 5052051 | 331.2.1.1 ↗ | a+b two layers › TBP-like › Phosphoglucomutase, C-terminal domain › Phosphoglucomutase, C-terminal domain › PGM_PMM_IV | 0.58 | 51.0 | 4.57e-01 | 100.0% | 70.7% |
| 4599093 | 325.1.7.0 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif | 0.58 | 44.0 | 4.80e-01 | 100.0% | 100.0% |
| 3291702 | 331.3.1.0 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like | 0.58 | 50.0 | 3.94e-01 | 100.0% | 58.8% |
| 3288251 | 331.3.1.9 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › AHSA1 | 0.58 | 48.0 | 3.87e-01 | 100.0% | 61.3% |
| 5063609 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.58 | 43.0 | 3.76e-01 | 94.1% | 51.9% |
| 5064269 | 331.2.1.1 ↗ | a+b two layers › TBP-like › Phosphoglucomutase, C-terminal domain › Phosphoglucomutase, C-terminal domain › PGM_PMM_IV | 0.56 | 43.0 | 4.15e-01 | 100.0% | 71.8% |
| 4128441 | 325.1.7.0 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif | 0.56 | 42.0 | 4.39e-01 | 100.0% | 91.7% |
| 5035567 | 331.2.1.1 ↗ | a+b two layers › TBP-like › Phosphoglucomutase, C-terminal domain › Phosphoglucomutase, C-terminal domain › PGM_PMM_IV | 0.56 | 44.0 | 4.44e-01 | 100.0% | 89.9% |
| 3957864 | 881.1.1.17 ↗ | a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like › DUF3710 | 0.55 | 46.0 | 3.62e-01 | 100.0% | 46.5% |
| 4930594 | 331.1.1.0 ↗ | a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like | 0.55 | 42.0 | 4.16e-01 | 100.0% | 77.3% |
| 5008200 | 223.1.1.0 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains | 0.55 | 47.0 | 4.73e-01 | 100.0% | 92.9% |
| 3716322 | 4011.1.1.0 ↗ | beta barrels › beta-barrel domain in acetyl-CoA synthetase-like proteins › beta-barrel domain in acetyl-CoA synthetase-like proteins › beta-barrel domain in acetyl-CoA synthetase-like proteins | 0.54 | 38.0 | 3.42e-01 | 100.0% | 52.6% |
| 3960959 | 211.1.1.0 ↗ | a+b two layers › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase | 0.54 | 42.0 | 4.36e-01 | 89.7% | 100.0% |
| 3332318 | 331.2.1.11 ↗ | a+b two layers › TBP-like › Phosphoglucomutase, C-terminal domain › Phosphoglucomutase, C-terminal domain › COR-B | 0.53 | 45.0 | 3.39e-01 | 100.0% | 38.4% |
| 4456766 | 11.1.4.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like | 0.53 | 37.0 | 3.08e-01 | 75.0% | 92.3% |
| 3805333 | 331.18.1.4 ↗ | a+b two layers › TBP-like › C-terminal TBP-like domain of Roc › C-terminal TBP-like domain of Roc › COR-B | 0.52 | 44.0 | 3.27e-01 | 100.0% | 36.5% |
| 4512379 | 223.1.1.0 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains | 0.52 | 46.0 | 3.77e-01 | 100.0% | 64.8% |
| 4928447 | 873.1.1.0 ↗ | a+b complex topology › H-NOX domain › H-NOX domain › H-NOX domain | 0.52 | 44.0 | 3.80e-01 | 100.0% | 75.7% |
| 4037823 | 11.1.4.15 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like › Mfa2 | 0.52 | 36.0 | 2.97e-01 | 75.0% | 87.4% |
| 4461893 | 2004.1.1.198 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_23 | 0.51 | 40.0 | 2.41e-01 | 89.7% | 74.0% |
| 4590495 | 149.1.1.1 ↗ | alpha arrays › Cytochrome P450 › Cytochrome P450 › Cytochrome P450 › p450 | 0.51 | 41.0 | 2.46e-01 | 91.2% | 67.5% |
| 3282190 | 3794.1.1.2 ↗ | a+b two layers › Methylcrotonyl-CoA carboxylase alpha-subunit BT domain-related › Methylcrotonyl-CoA carboxylase alpha-subunit BT domain-related › Barrel domain in methylcrotonyl-CoA carboxylase alpha-subunit › MCC_alpha_BT | 0.51 | 42.0 | 3.62e-01 | 100.0% | 85.6% |
| 3508002 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.51 | 42.0 | 2.78e-01 | 91.2% | 35.6% |
| 3497279 | 59.1.4.0 ↗ | beta complex topology › triple barrel › triple barrel › TFIID subunits TAF1-TAF7 | 0.51 | 43.0 | 3.29e-01 | 94.1% | 54.8% |