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MW302330.1__QTJ63002.1__X__00024

Bact-Vir

MW302330.1__QTJ63002.1__X__00024

Identity

Accession:
MW302330 ↗
Kingdom:
phage

Quality

94.3 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 11-68
PDB
Domain cluster: representative
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF04405.20 best ScdA_N 78.9 2.40e-22 89.7% 92.9%
CATH (42)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3g3zA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.66 44.0 4.34e-01 74.1% 64.1%
8dtqA01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.64 52.0 4.74e-01 93.1% 92.7%
5dukB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.64 43.0 4.16e-01 74.1% 61.2%
3d0sA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.63 45.0 4.09e-01 75.9% 67.5%
1z05A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.63 43.0 4.05e-01 74.1% 56.9%
2da7A00 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.63 44.0 4.16e-01 74.1% 67.6%
4pcqA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.62 42.0 4.39e-01 72.4% 82.0%
4kmfA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.62 43.0 4.22e-01 75.9% 67.7%
4e70A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.61 44.0 3.74e-01 79.3% 49.5%
3vfzB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.61 46.0 4.54e-01 86.2% 90.5%
2cfxA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.60 41.0 4.31e-01 74.1% 84.0%
1u8bA02 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.60 41.0 4.05e-01 70.7% 68.9%
4qicC01 1.20.140.160 Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › PhyR, sigma-like (SL) domain 0.60 46.0 3.72e-01 87.9% 69.6%
2v9vA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.60 41.0 4.11e-01 72.4% 71.7%
2jt1A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.60 42.0 4.01e-01 75.9% 64.8%
2m8gX00 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.60 40.0 3.79e-01 72.4% 57.1%
2p5vA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.60 41.0 4.25e-01 72.4% 84.6%
3m8jA00 1.10.10.2690 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › 0.60 50.0 4.44e-01 100.0% 73.3%
2xubA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.59 42.0 3.92e-01 77.6% 64.1%
3memA02 1.10.3210.10 Mainly Alpha › Orthogonal Bundle › Hypothetical protein af1432 › Hypothetical protein af1432 0.59 50.0 3.17e-01 100.0% 18.1%
2gtsA00 1.10.287.850 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HP0062-like domain 0.59 44.0 3.98e-01 86.2% 59.7%
3lstA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.59 43.0 3.89e-01 81.0% 55.8%
2h09A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.58 41.0 3.97e-01 77.6% 64.8%
1b0bA00 1.10.490.10 Mainly Alpha › Orthogonal Bundle › Globin-like › Globins 0.58 46.0 3.58e-01 91.4% 73.0%
7cluA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.58 41.0 3.70e-01 79.3% 51.7%
1x2nA01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.58 43.0 4.29e-01 100.0% 78.3%
4nt1A00 1.10.3520.10 Mainly Alpha › Orthogonal Bundle › Glycolipid transfer protein, GLTP › Glycolipid transfer protein 0.57 42.0 2.98e-01 81.0% 80.5%
1rr7A02 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.57 37.0 3.88e-01 74.1% 79.2%
1j5yA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.56 39.0 3.87e-01 75.9% 68.8%
4rocA01 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.56 47.0 3.91e-01 94.8% 74.8%
3besR03 6.10.140.1480 Special › Helix non-globular › Helix Hairpins › 0.54 40.0 4.07e-01 93.1% 80.4%
1aisB02 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.54 45.0 3.93e-01 96.6% 80.9%
2di3A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.54 39.0 3.66e-01 79.3% 93.3%
3g2bA00 1.10.10.1150 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Coenzyme PQQ synthesis protein D (PqqD) 0.54 42.0 3.65e-01 84.5% 55.6%
2lvsA01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.54 36.0 3.67e-01 75.9% 73.2%
3t0yA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.54 41.0 4.07e-01 86.2% 88.3%
2zyhA01 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.54 47.0 3.19e-01 98.3% 42.2%
5f64A02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.53 39.0 3.65e-01 82.8% 64.0%
3f8mA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.52 37.0 3.64e-01 79.3% 89.2%
1hw1A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.51 37.0 3.53e-01 81.0% 89.3%
4bxoA02 1.10.150.20 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › 5' to 3' exonuclease, C-terminal subdomain 0.50 39.0 3.82e-01 93.1% 95.5%
3rrkA02 1.20.1460.20 Mainly Alpha › Up-down Bundle › subunit c (vma5p) of the yeast v-atpase, domain 2 › 0.50 40.0 2.97e-01 87.9% 38.7%
ECOD (53)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3975430 4159.1.1.1 alpha arrays › SP0561-like › SP0561-like › SP0561-like › ScdA_N 0.94 84.0 7.82e-01 96.6% 78.6%
4992619 4159.1.1.1 alpha arrays › SP0561-like › SP0561-like › SP0561-like › ScdA_N 0.90 76.0 7.55e-01 89.7% 86.7%
5009653 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.68 59.0 5.71e-01 100.0% 92.3%
3389609 101.1.1.35 alpha arrays › HTH › HTH › Three-helical HTH › HTH_psq 0.67 48.0 4.50e-01 75.9% 62.9%
5068679 101.1.2.30 alpha arrays › HTH › HTH › winged helix domain › TrmB 0.65 42.0 4.36e-01 75.9% 70.9%
5072420 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.65 44.0 4.69e-01 74.1% 84.0%
5078207 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.65 43.0 4.44e-01 84.5% 72.2%
5060354 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.64 43.0 4.22e-01 72.4% 63.1%
4979401 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.64 43.0 4.47e-01 74.1% 76.4%
4944620 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.64 43.0 4.46e-01 75.9% 76.4%
3163613 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.63 50.0 4.81e-01 91.4% 90.0%
4947593 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.63 43.0 4.41e-01 75.9% 76.4%
5032612 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.62 42.0 4.34e-01 75.9% 74.5%
5047085 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.62 44.0 4.00e-01 75.9% 56.2%
3962667 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.62 42.0 4.29e-01 70.7% 78.2%
4347676 101.1.6.4 alpha arrays › HTH › HTH › TrpR › Bac_DnaA_C 0.62 43.0 3.80e-01 79.3% 47.8%
5030106 101.1.2.140 alpha arrays › HTH › HTH › winged helix domain › HTH_AsnC-type 0.62 42.0 4.34e-01 74.1% 76.4%
3943810 101.1.2.136 alpha arrays › HTH › HTH › winged helix domain › HTH_20 0.62 45.0 4.43e-01 81.0% 83.1%
5082754 101.1.2.141 alpha arrays › HTH › HTH › winged helix domain › HTH_24 0.61 42.0 4.22e-01 74.1% 71.7%
5032601 101.1.2.141 alpha arrays › HTH › HTH › winged helix domain › HTH_24 0.60 41.0 4.24e-01 74.1% 76.4%
4984666 101.1.2.141 alpha arrays › HTH › HTH › winged helix domain › HTH_24 0.60 42.0 3.92e-01 75.9% 57.3%
4980888 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.60 41.0 4.02e-01 72.4% 64.6%
3778380 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.60 42.0 3.97e-01 74.1% 77.1%
4977106 101.1.2.141 alpha arrays › HTH › HTH › winged helix domain › HTH_24 0.60 42.0 4.07e-01 75.9% 66.2%
4966784 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.60 39.0 3.94e-01 72.4% 66.7%
5058496 101.1.2.140 alpha arrays › HTH › HTH › winged helix domain › HTH_AsnC-type 0.59 40.0 3.89e-01 72.4% 64.3%
4201679 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.59 43.0 3.84e-01 77.6% 60.0%
3952144 101.1.2.141 alpha arrays › HTH › HTH › winged helix domain › HTH_24 0.59 41.0 4.04e-01 74.1% 70.8%
3452941 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.59 40.0 4.22e-01 74.1% 82.0%
4947595 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.59 41.0 3.81e-01 75.9% 57.3%
5046856 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.58 41.0 4.16e-01 75.9% 78.2%
3164718 101.1.2.141 alpha arrays › HTH › HTH › winged helix domain › HTH_24 0.58 40.0 3.77e-01 74.1% 60.0%
3174911 102.1.1.0 alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like 0.58 42.0 4.08e-01 75.9% 72.3%
5062184 101.1.2.141 alpha arrays › HTH › HTH › winged helix domain › HTH_24 0.58 41.0 4.07e-01 75.9% 75.0%
3957509 101.1.2.140 alpha arrays › HTH › HTH › winged helix domain › HTH_AsnC-type 0.58 40.0 4.00e-01 74.1% 75.0%
4979101 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.58 40.0 3.86e-01 74.1% 61.8%
3642026 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.58 39.0 3.99e-01 70.7% 90.9%
5044109 101.1.2.141 alpha arrays › HTH › HTH › winged helix domain › HTH_24 0.58 40.0 3.89e-01 75.9% 65.7%
3727217 101.1.2.384 alpha arrays › HTH › HTH › winged helix domain › Myb_DNA-bind_8 0.57 42.0 4.46e-01 81.0% 90.0%
3318879 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.57 39.0 3.77e-01 70.7% 73.8%
3401087 101.1.1.24 alpha arrays › HTH › HTH › Three-helical HTH › CENP-B_N 0.57 38.0 3.96e-01 72.4% 78.0%
5076741 101.1.2.141 alpha arrays › HTH › HTH › winged helix domain › HTH_24 0.57 39.0 4.15e-01 75.9% 86.0%
4977346 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.57 39.0 4.15e-01 75.9% 84.0%
4148347 101.1.1.26 alpha arrays › HTH › HTH › Three-helical HTH › UPF0122 0.57 45.0 3.90e-01 94.8% 57.7%
3250031 101.1.1.297 alpha arrays › HTH › HTH › Three-helical HTH › HTH_NPRL3 0.56 41.0 4.05e-01 81.0% 78.5%
4943755 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.56 39.0 3.59e-01 75.9% 53.8%
3971860 101.1.1.42 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.56 42.0 4.38e-01 82.8% 100.0%
4895784 101.1.2.623 alpha arrays › HTH › HTH › winged helix domain › PF25983 0.56 38.0 3.73e-01 74.1% 62.7%
4957621 4323.1.1.0 alpha bundles › helical bundle domain in vacuolar ATP synthase subunit C › helical bundle domain in vacuolar ATP synthase subunit C › helical bundle domain in vacuolar ATP synthase subunit C 0.55 43.0 3.24e-01 86.2% 89.7%
3964397 101.1.1.42 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.54 44.0 3.75e-01 94.8% 66.7%
2792505 101.1.2.139 alpha arrays › HTH › HTH › winged helix domain › HTH_23 0.54 37.0 3.79e-01 75.9% 75.4%
3786128 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.54 41.0 3.84e-01 91.4% 92.5%
4979948 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.53 38.0 3.92e-01 81.0% 85.5%
D2 high residues 75-232
PDB
Domain cluster: representative
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF01814.29 best Hemerythrin 79.0 6.10e-22 94.3% 98.4%
CATH (66)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1yo7A00 1.20.120.230 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Alpha-catenin/vinculin-like 0.87 65.0 7.39e-01 95.6% 100.0%
3zciA00 1.20.58.1660 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.81 71.0 6.58e-01 91.1% 92.7%
1x8zB00 1.20.140.40 Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Invertase/pectin methylesterase inhibitor family protein 0.81 62.0 6.40e-01 98.1% 84.4%
1uurA01 1.20.58.240 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › STAT; domain 1 0.80 55.0 6.49e-01 73.4% 100.0%
2yfaA02 1.20.1440.210 Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › 0.79 56.0 6.47e-01 98.7% 100.0%
3kavA00 1.20.1270.360 Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › 0.78 50.0 6.11e-01 86.1% 100.0%
1lvfB00 1.20.58.90 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.78 51.0 6.13e-01 71.5% 100.0%
4hwhE00 1.20.58.120 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › BAG domain 0.77 44.0 5.70e-01 78.5% 100.0%
3lmfA00 1.20.1270.360 Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › 0.77 53.0 6.16e-01 92.4% 100.0%
1u89A00 1.20.120.230 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Alpha-catenin/vinculin-like 0.77 59.0 6.29e-01 97.5% 90.6%
1y1uA01 1.20.1050.20 Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › STAT transcription factor, all-alpha domain 0.76 54.0 5.00e-01 72.2% 58.5%
1qoyA00 1.20.1170.10 Mainly Alpha › Up-down Bundle › Hemolysin E; Chain: A; › 0.76 70.0 5.57e-01 98.7% 78.2%
3efzB00 1.20.190.20 Mainly Alpha › Up-down Bundle › Delta-Endotoxin; domain 1 › 14-3-3 domain 0.75 57.0 5.05e-01 82.9% 55.6%
1t72A01 1.20.58.220 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphate transport system protein phou homolog 2; domain 2 0.74 50.0 5.65e-01 76.6% 90.6%
1t98A02 1.20.58.590 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Chromosome partition protein MukF, middle domain 0.74 58.0 5.76e-01 80.4% 85.9%
1qkrB00 1.20.120.230 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Alpha-catenin/vinculin-like 0.74 54.0 5.19e-01 83.5% 66.1%
3nbxX03 1.20.58.1510 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.74 43.0 5.28e-01 82.9% 90.1%
2i0mA02 1.20.58.220 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphate transport system protein phou homolog 2; domain 2 0.73 45.0 5.43e-01 78.5% 94.1%
1sumB01 1.20.58.220 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphate transport system protein phou homolog 2; domain 2 0.73 48.0 5.69e-01 77.2% 97.2%
1vctA01 1.20.58.220 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphate transport system protein phou homolog 2; domain 2 0.73 45.0 5.29e-01 72.2% 88.1%
1i4dA00 1.20.1270.60 Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain 0.73 52.0 4.86e-01 72.2% 92.6%
4dwlA00 1.20.1440.60 Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › 23S rRNA-intervening sequence 0.73 49.0 5.75e-01 93.7% 99.1%
2lqgA00 1.20.120.230 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Alpha-catenin/vinculin-like 0.72 57.0 6.07e-01 98.7% 96.4%
3l8rA00 1.20.58.80 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit 0.72 46.0 5.50e-01 76.6% 98.0%
5figA00 1.20.1270.360 Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › 0.71 44.0 5.31e-01 98.7% 96.0%
3rkgA02 1.20.58.340 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Magnesium transport protein CorA, transmembrane region 0.71 56.0 5.57e-01 82.3% 85.4%
3ggyA00 1.20.1260.60 Mainly Alpha › Up-down Bundle › Ferritin › Vacuolar protein sorting-associated protein Ist1 0.71 56.0 5.33e-01 100.0% 70.4%
1dn1B00 1.20.58.70 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.70 53.0 4.72e-01 77.8% 77.9%
5nl6B01 1.20.58.60 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.70 50.0 5.61e-01 74.1% 95.0%
6grjB01 1.20.1170.10 Mainly Alpha › Up-down Bundle › Hemolysin E; Chain: A; › 0.69 63.0 4.98e-01 97.5% 82.4%
2etdA00 1.20.1440.20 Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › LemA-like domain 0.69 54.0 5.70e-01 98.1% 91.5%
2rgnB01 1.20.900.10 Mainly Alpha › Up-down Bundle › Dbl Homology Domain; Chain A › Dbl homology (DH) domain 0.69 63.0 5.77e-01 98.7% 79.9%
3pltA00 1.20.1270.60 Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain 0.68 50.0 4.52e-01 75.9% 81.8%
3zdqA01 1.20.1560.10 Mainly Alpha › Up-down Bundle › ABC transporter transmembrane region fold › ABC transporter type 1, transmembrane domain 0.68 48.0 3.74e-01 71.5% 96.1%
1fioA00 1.20.58.70 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.68 51.0 4.79e-01 77.8% 80.5%
1xg2B00 1.20.140.40 Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Invertase/pectin methylesterase inhibitor family protein 0.68 59.0 6.11e-01 99.4% 97.4%
1wvtA00 1.20.1200.10 Mainly Alpha › Up-down Bundle › Hypothetical Protein Ta1238; Chain: A; › Cobalamin adenosyltransferase-like 0.66 46.0 4.77e-01 96.8% 76.4%
1nfvA00 1.20.1260.10 Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle 0.65 46.0 4.49e-01 98.1% 66.9%
3nyjA00 1.20.120.770 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Amyloid precursor protein, E2 domain 0.65 46.0 4.42e-01 75.9% 63.0%
4dylA01 1.20.1270.60 Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain 0.65 46.0 3.95e-01 72.2% 82.8%
2wb7A03 1.20.120.870 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › pT26-6p, five-helical bundle domain 0.65 44.0 4.70e-01 77.2% 79.4%
4q4hA01 1.20.1560.10 Mainly Alpha › Up-down Bundle › ABC transporter transmembrane region fold › ABC transporter type 1, transmembrane domain 0.64 46.0 3.68e-01 73.4% 94.3%
6xj1A01 1.20.1270.60 Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain 0.64 45.0 3.94e-01 72.2% 87.8%
3cazB00 1.20.1270.60 Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain 0.64 45.0 4.06e-01 70.9% 84.3%
2fupA00 1.20.58.300 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › FlgN-like 0.63 45.0 4.97e-01 78.5% 91.3%
8iprA01 1.20.1560.10 Mainly Alpha › Up-down Bundle › ABC transporter transmembrane region fold › ABC transporter type 1, transmembrane domain 0.63 48.0 3.89e-01 81.0% 58.5%
6v9zA02 1.20.1560.10 Mainly Alpha › Up-down Bundle › ABC transporter transmembrane region fold › ABC transporter type 1, transmembrane domain 0.63 43.0 3.45e-01 70.3% 96.9%
2p7vA00 1.20.120.1370 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Regulator of RNA polymerase sigma(70) subunit, domain 4 0.62 46.0 4.68e-01 77.2% 78.8%
3owaB04 1.20.140.10 Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 0.62 50.0 5.02e-01 94.9% 86.0%
6tqfA01 1.20.1560.10 Mainly Alpha › Up-down Bundle › ABC transporter transmembrane region fold › ABC transporter type 1, transmembrane domain 0.61 48.0 3.56e-01 81.6% 53.2%
4kb2A01 1.10.132.20 Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › Ribosome-recycling factor 0.61 39.0 4.59e-01 70.3% 92.7%
7xxiA01 1.20.1070.10 Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins 0.59 52.0 4.24e-01 94.9% 89.7%
3m9vA03 1.20.140.10 Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 0.59 52.0 5.26e-01 99.4% 98.1%
7qihA01 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.59 28.0 3.51e-01 78.5% 72.3%
5gl7A01 1.10.730.10 Mainly Alpha › Orthogonal Bundle › Isoleucyl-tRNA Synthetase; Domain 1 › Isoleucyl-tRNA Synthetase; Domain 1 0.59 45.0 4.45e-01 94.3% 75.3%
2ihr101 1.20.58.410 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Release factor 0.58 38.0 4.44e-01 84.2% 96.2%
6o7uc01 1.20.120.610 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › lithium bound rotor ring of v- atpase 0.58 40.0 3.76e-01 70.3% 57.9%
2oezA02 1.10.3900.10 Mainly Alpha › Orthogonal Bundle › YacF-like › YacF-like 0.57 42.0 4.19e-01 75.3% 82.8%
1w33A00 1.10.3160.10 Mainly Alpha › Orthogonal Bundle › Bbcrasp-1 › Bbcrasp-1 0.57 42.0 4.06e-01 75.9% 84.0%
4mrsA01 1.20.1560.10 Mainly Alpha › Up-down Bundle › ABC transporter transmembrane region fold › ABC transporter type 1, transmembrane domain 0.56 43.0 3.37e-01 79.7% 86.0%
1tj7A01 1.10.275.10 Mainly Alpha › Orthogonal Bundle › Fumarase C; Chain B, domain 1 › Fumarase/aspartase (N-terminal domain) 0.55 33.0 3.89e-01 88.6% 86.7%
4k7rA01 1.20.1600.10 Mainly Alpha › Up-down Bundle › Outer membrane efflux proteins (OEP) › Outer membrane efflux proteins (OEP) 0.54 45.0 3.53e-01 89.2% 65.0%
7zdtD01 1.20.1560.10 Mainly Alpha › Up-down Bundle › ABC transporter transmembrane region fold › ABC transporter type 1, transmembrane domain 0.53 47.0 3.80e-01 99.4% 71.5%
3s84A02 1.20.120.20 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Apolipoprotein 0.51 36.0 3.64e-01 70.9% 87.9%
2e9fB01 1.10.275.10 Mainly Alpha › Orthogonal Bundle › Fumarase C; Chain B, domain 1 › Fumarase/aspartase (N-terminal domain) 0.51 31.0 3.88e-01 82.3% 100.0%
2ff4A02 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.51 40.0 3.84e-01 82.3% 86.3%
ECOD (59)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4046137 601.14.1.1 alpha bundles › Four-helical up-and-down bundle › Hemerythrin › Hemerythrin › Hemerythrin 0.98 94.0 9.29e-01 100.0% 94.5%
3163923 601.14.1.1 alpha bundles › Four-helical up-and-down bundle › Hemerythrin › Hemerythrin › Hemerythrin 0.95 88.0 8.75e-01 100.0% 92.6%
3830809 633.4.1.0 alpha bundles › Bromodomain-like › Plant invertase/pectin methylesterase inhibitor › Plant invertase/pectin methylesterase inhibitor 0.82 61.0 6.93e-01 94.3% 100.0%
3247549 174.1.1.0 few secondary structure elements › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain 0.81 63.0 6.70e-01 98.7% 90.7%
3999040 150.1.1.0 alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › Ferritin/Heme oxygenase › Ferritin 0.81 71.0 6.94e-01 91.8% 92.9%
None 0.81 58.0 4.85e-01 75.3% 45.5%
3490044 603.1.1.99 alpha bundles › STAT-like › t-snare proteins › t-snare proteins › PF27021 0.80 52.0 5.74e-01 70.9% 79.2%
3176858 174.1.1.0 few secondary structure elements › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain 0.80 63.0 6.71e-01 99.4% 92.1%
3638080 150.1.1.0 alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › Ferritin/Heme oxygenase › Ferritin 0.80 71.0 7.28e-01 98.1% 99.3%
3936715 174.1.1.0 few secondary structure elements › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain 0.79 65.0 6.98e-01 98.7% 99.3%
3938254 633.21.1.0 alpha bundles › Bromodomain-like › Uncharacterized protein PA2107 › Uncharacterized protein PA2107 0.78 61.0 6.69e-01 98.1% 100.0%
3590504 3758.1.1.4 alpha bundles › Bacterial hemolysins-like › Bacterial hemolysins › Bacterial hemolysins › TelA 0.77 57.0 4.89e-01 77.2% 81.6%
3601852 604.1.1.0 alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat 0.76 63.0 6.21e-01 88.0% 82.4%
4025201 604.5.1.0 alpha bundles › Spectrin repeat-like › PhoU-like (Pfam 01895) › PhoU-like (Pfam 01895) 0.75 50.0 5.88e-01 75.3% 96.4%
5007499 604.5.1.2 alpha bundles › Spectrin repeat-like › PhoU-like (Pfam 01895) › PhoU-like (Pfam 01895) › PhoU 0.75 53.0 4.83e-01 98.7% 55.6%
3640330 604.1.1.0 alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat 0.75 54.0 5.75e-01 92.4% 83.6%
3916065 633.21.1.23 alpha bundles › Bromodomain-like › Uncharacterized protein PA2107 › Uncharacterized protein PA2107 › CD20 0.75 64.0 6.47e-01 97.5% 90.6%
3179505 633.23.1.22 alpha bundles › Bromodomain-like › Claudin › Claudin › MARVEL 0.74 67.0 6.84e-01 97.5% 98.7%
5010301 604.5.1.2 alpha bundles › Spectrin repeat-like › PhoU-like (Pfam 01895) › PhoU-like (Pfam 01895) › PhoU 0.73 53.0 4.89e-01 98.7% 58.5%
3714806 4121.1.1.1 a+b three layers › CorA soluble domain-like › CorA soluble domain-like › CorA soluble domain-like › CorA 0.73 57.0 4.66e-01 81.6% 48.2%
3513855 633.23.1.22 alpha bundles › Bromodomain-like › Claudin › Claudin › MARVEL 0.72 62.0 6.49e-01 96.8% 99.3%
5060908 150.1.1.0 alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › Ferritin/Heme oxygenase › Ferritin 0.72 61.0 6.29e-01 94.3% 95.3%
3396317 174.1.1.43 few secondary structure elements › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › CD20 0.72 63.0 6.10e-01 98.1% 84.0%
3592583 633.10.1.0 alpha bundles › Bromodomain-like › IVS-encoded protein-like › IVS-encoded protein-like 0.72 51.0 5.84e-01 100.0% 100.0%
3783862 603.1.1.17 alpha bundles › STAT-like › t-snare proteins › t-snare proteins › SNARE 0.70 53.0 4.45e-01 77.8% 78.8%
3938166 174.1.1.0 few secondary structure elements › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain 0.69 61.0 6.26e-01 98.1% 98.7%
3390382 174.1.1.29 few secondary structure elements › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › DUF4728 0.69 62.0 6.12e-01 100.0% 92.7%
3941265 633.21.1.0 alpha bundles › Bromodomain-like › Uncharacterized protein PA2107 › Uncharacterized protein PA2107 0.68 60.0 6.01e-01 98.1% 92.5%
3814234 633.4.1.1 alpha bundles › Bromodomain-like › Plant invertase/pectin methylesterase inhibitor › Plant invertase/pectin methylesterase inhibitor › PMEI 0.68 54.0 5.84e-01 94.3% 100.0%
4026849 150.1.1.0 alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › Ferritin/Heme oxygenase › Ferritin 0.68 57.0 4.88e-01 98.7% 56.8%
3413463 603.1.1.101 alpha bundles › STAT-like › t-snare proteins › t-snare proteins › 7tm_6 0.67 55.0 4.36e-01 88.6% 52.6%
3649362 4177.1.1.0 alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like 0.66 60.0 4.55e-01 99.4% 56.3%
3400959 4177.1.1.8 alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like › BAR_3 0.65 48.0 3.98e-01 75.9% 74.5%
3608199 1189.1.1.0 alpha bundles › VSG (variant surface glycoprotein) N-terminal domain and haptoglobin-hemoglobin receptor › VSG (variant surface glycoprotein) N-terminal domain and haptoglobin-hemoglobin receptor › VSG (variant surface glycoprotein) N-terminal domain and haptoglobin-hemoglobin receptor 0.65 48.0 4.63e-01 77.8% 93.0%
4080313 310.2.1.0 a+b two layers › RRF/tRNA synthetase additional domain-like › Ribosome recycling factor, RRF › Ribosome recycling factor, RRF 0.64 46.0 4.88e-01 73.4% 92.9%
4822553 1075.4.1.1 alpha bundles › Type II ABC exporter transmembrane domain fold › Type I ABC exporter transmembrane domain fold › Type I ABC exporter transmembrane domain fold › ABC_membrane 0.63 53.0 4.00e-01 89.9% 47.2%
4611277 1075.4.1.1 alpha bundles › Type II ABC exporter transmembrane domain fold › Type I ABC exporter transmembrane domain fold › Type I ABC exporter transmembrane domain fold › ABC_membrane 0.63 49.0 3.86e-01 81.0% 57.5%
3388451 1075.4.1.1 alpha bundles › Type II ABC exporter transmembrane domain fold › Type I ABC exporter transmembrane domain fold › Type I ABC exporter transmembrane domain fold › ABC_membrane 0.62 43.0 3.45e-01 70.3% 44.8%
4873383 1075.4.1.1 alpha bundles › Type II ABC exporter transmembrane domain fold › Type I ABC exporter transmembrane domain fold › Type I ABC exporter transmembrane domain fold › ABC_membrane 0.61 51.0 3.81e-01 89.2% 45.1%
3446311 1075.4.1.1 alpha bundles › Type II ABC exporter transmembrane domain fold › Type I ABC exporter transmembrane domain fold › Type I ABC exporter transmembrane domain fold › ABC_membrane 0.59 46.0 3.69e-01 80.4% 54.0%
3235287 3755.3.1.0 alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin 0.59 49.0 3.97e-01 86.1% 62.1%
4874205 1075.4.1.1 alpha bundles › Type II ABC exporter transmembrane domain fold › Type I ABC exporter transmembrane domain fold › Type I ABC exporter transmembrane domain fold › ABC_membrane 0.58 44.0 3.89e-01 79.1% 68.4%
4962634 1075.4.1.1 alpha bundles › Type II ABC exporter transmembrane domain fold › Type I ABC exporter transmembrane domain fold › Type I ABC exporter transmembrane domain fold › ABC_membrane 0.58 47.0 3.62e-01 85.4% 85.1%
3284311 1075.4.1.1 alpha bundles › Type II ABC exporter transmembrane domain fold › Type I ABC exporter transmembrane domain fold › Type I ABC exporter transmembrane domain fold › ABC_membrane 0.58 51.0 4.07e-01 96.2% 56.6%
3691712 1075.4.1.1 alpha bundles › Type II ABC exporter transmembrane domain fold › Type I ABC exporter transmembrane domain fold › Type I ABC exporter transmembrane domain fold › ABC_membrane 0.57 47.0 3.66e-01 86.1% 56.4%
3588761 1075.4.1.1 alpha bundles › Type II ABC exporter transmembrane domain fold › Type I ABC exporter transmembrane domain fold › Type I ABC exporter transmembrane domain fold › ABC_membrane 0.57 49.0 3.99e-01 94.9% 56.5%
3667580 4177.1.1.0 alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like 0.57 51.0 4.30e-01 97.5% 87.5%
4566325 1075.4.1.1 alpha bundles › Type II ABC exporter transmembrane domain fold › Type I ABC exporter transmembrane domain fold › Type I ABC exporter transmembrane domain fold › ABC_membrane 0.57 48.0 3.84e-01 92.4% 52.2%
3661886 1075.4.1.1 alpha bundles › Type II ABC exporter transmembrane domain fold › Type I ABC exporter transmembrane domain fold › Type I ABC exporter transmembrane domain fold › ABC_membrane 0.57 47.0 3.79e-01 88.6% 54.5%
3417771 1075.4.1.1 alpha bundles › Type II ABC exporter transmembrane domain fold › Type I ABC exporter transmembrane domain fold › Type I ABC exporter transmembrane domain fold › ABC_membrane 0.57 45.0 4.07e-01 85.4% 74.2%
1761248 3567.1.1.0 a+b duplicates or obligate multimers › MPER trimer › MPER trimer › MPER trimer 0.56 50.0 4.69e-01 98.1% 82.7%
4342285 1075.4.1.1 alpha bundles › Type II ABC exporter transmembrane domain fold › Type I ABC exporter transmembrane domain fold › Type I ABC exporter transmembrane domain fold › ABC_membrane 0.56 48.0 3.82e-01 92.4% 53.8%
3640000 1075.4.1.1 alpha bundles › Type II ABC exporter transmembrane domain fold › Type I ABC exporter transmembrane domain fold › Type I ABC exporter transmembrane domain fold › ABC_membrane 0.56 47.0 3.74e-01 89.9% 52.4%
4360632 3755.4.1.0 alpha bundles › YscO-like › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain 0.55 42.0 4.31e-01 98.1% 82.0%
4888150 1075.4.1.9 alpha bundles › Type II ABC exporter transmembrane domain fold › Type I ABC exporter transmembrane domain fold › Type I ABC exporter transmembrane domain fold › ABC_tran+ABC_membrane 0.55 46.0 3.72e-01 92.4% 51.1%
3080489 1075.4.1.1 alpha bundles › Type II ABC exporter transmembrane domain fold › Type I ABC exporter transmembrane domain fold › Type I ABC exporter transmembrane domain fold › ABC_membrane 0.55 45.0 3.56e-01 87.3% 86.0%
3712648 3755.4.1.0 alpha bundles › YscO-like › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain 0.53 44.0 4.09e-01 97.5% 71.1%
4875104 1075.4.1.1 alpha bundles › Type II ABC exporter transmembrane domain fold › Type I ABC exporter transmembrane domain fold › Type I ABC exporter transmembrane domain fold › ABC_membrane 0.52 44.0 3.57e-01 94.3% 52.6%
5040665 2004.1.1.198 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_23 0.51 38.0 2.59e-01 77.2% 59.5%