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MW314854.1__QPO17454.1__PHIGD24-3_84__00080
Bact-VirMW314854.1__QPO17454.1__PHIGD24-3_84__00080
Identity
- Accession:
- MW314854 ↗
- Kingdom:
- phage
Quality
61.0
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 74-140
Domain cluster:
rep: MW584199.1__QSM04516.1__PROPHIGD02-2_36__00036__D31-92
CATH (28)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4ffkA02 | 3.55.40.20 | Alpha Beta › 3-Layer(bab) Sandwich › minor pseudopilin epsh fold › Iron/manganese superoxide dismutase, C-terminal domain | 0.64 | 38.0 | 3.12e-01 | 88.1% | 32.5% |
| 3h20A01 | 3.30.1490.240 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › RepB DNA-primase, N-terminal domain | 0.63 | 42.0 | 4.28e-01 | 85.1% | 69.7% |
| 2jz6A01 | 2.30.170.40 | Mainly Beta › Roll › Ribosomal Protein L24e; Chain: T; › Ribosomal protein L28/L24 | 0.62 | 35.0 | 3.90e-01 | 85.1% | 72.0% |
| 2npnA02 | 3.30.950.10 | Alpha Beta › 2-Layer Sandwich › Methyltransferase, Cobalt-precorrin-4 Transmethylase; Domain 2 › Tetrapyrrole methylase, C-terminal domain | 0.62 | 43.0 | 3.67e-01 | 86.6% | 45.0% |
| 5r0dB01 | 2.60.34.20 | Mainly Beta › Sandwich › Substrate Binding Domain Of DNAk; Chain A, domain 1 › | 0.61 | 38.0 | 2.98e-01 | 73.1% | 29.4% |
| 2e1qC01 | 3.10.20.30 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Beta-grasp domain | 0.60 | 39.0 | 3.50e-01 | 89.6% | 47.8% |
| 3cjmA00 | 3.40.710.10 | Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily | 0.60 | 48.0 | 3.29e-01 | 89.6% | 65.1% |
| 4kyzA00 | 3.30.70.600 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S10 | 0.59 | 46.0 | 3.47e-01 | 85.1% | 47.9% |
| 2ed8A01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.58 | 36.0 | 3.34e-01 | 85.1% | 48.8% |
| 6kjcA00 | 3.40.710.10 | Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily | 0.58 | 46.0 | 2.89e-01 | 89.6% | 72.6% |
| 4la9A01 | 3.40.190.10 | Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II | 0.58 | 44.0 | 3.62e-01 | 85.1% | 95.4% |
| 4dohE02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.57 | 36.0 | 3.12e-01 | 86.6% | 40.6% |
| 1qysA00 | 3.30.1710.10 | Alpha Beta › 2-Layer Sandwich › top7, de novo designed protein › top7, de novo designed protein | 0.57 | 41.0 | 3.73e-01 | 83.6% | 56.5% |
| 4lyaA01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.56 | 41.0 | 2.71e-01 | 77.6% | 28.1% |
| 2v5yA03 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.55 | 34.0 | 3.10e-01 | 85.1% | 44.2% |
| 2g5dA01 | 2.40.40.10 | Mainly Beta › Beta Barrel › Barwin-like endoglucanases › RlpA-like domain | 0.55 | 36.0 | 2.63e-01 | 100.0% | 22.4% |
| 5hw3A00 | 3.40.710.10 | Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily | 0.55 | 41.0 | 2.82e-01 | 83.6% | 63.6% |
| 5utkA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.55 | 35.0 | 3.29e-01 | 86.6% | 53.0% |
| 1cfyA00 | 3.40.20.10 | Alpha Beta › 3-Layer(aba) Sandwich › Severin › Severin | 0.54 | 38.0 | 3.07e-01 | 73.1% | 71.4% |
| 2jvuA00 | 2.60.40.2290 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.53 | 37.0 | 3.30e-01 | 86.6% | 50.0% |
| 3ihjA01 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.53 | 37.0 | 2.77e-01 | 73.1% | 72.3% |
| 3r5lA00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.53 | 36.0 | 3.17e-01 | 74.6% | 81.9% |
| 3un0A00 | 2.60.200.20 | Mainly Beta › Sandwich › Tumour Suppressor Smad4 › | 0.53 | 42.0 | 3.67e-01 | 91.0% | 98.2% |
| 1dgsA02 | 3.30.1490.70 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › | 0.52 | 41.0 | 3.74e-01 | 88.1% | 75.8% |
| 2jvfA00 | 3.30.1710.10 | Alpha Beta › 2-Layer Sandwich › top7, de novo designed protein › top7, de novo designed protein | 0.52 | 40.0 | 3.64e-01 | 86.6% | 62.8% |
| 4p04A01 | 2.60.40.3100 | Mainly Beta › Sandwich › Immunoglobulin-like › Arylsulphate sulphotransferase monomer, N-terminal domain | 0.51 | 35.0 | 3.07e-01 | 85.1% | 46.2% |
| 4eq3A02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.50 | 35.0 | 3.04e-01 | 88.1% | 45.4% |
| 2bbhA01 | 3.30.460.20 | Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › CorA soluble domain-like | 0.50 | 34.0 | 2.79e-01 | 73.1% | 95.4% |
ECOD (27)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3553704 | 382.1.1.1 ↗ | few secondary structure elements › Snake toxin-like › Snake toxin-like › Snake toxin-like › UPAR_LY6 | 0.64 | 48.0 | 4.36e-01 | 88.1% | 60.0% |
| 3710611 | 2007.2.3.2 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › (Phosphotyrosine protein) phosphatases II › DSPc | 0.62 | 44.0 | 3.00e-01 | 85.1% | 19.2% |
| 3928432 | 382.1.1.0 ↗ | few secondary structure elements › Snake toxin-like › Snake toxin-like › Snake toxin-like | 0.61 | 51.0 | 4.47e-01 | 92.5% | 88.0% |
| 2870324 | 4012.3.1.1 ↗ | a+b two layers › SSHS domain › SSHS domain in CRISPR-associated endonuclease Cas9 › SSHS domain in CRISPR-associated endonuclease Cas9 › Cas9_PI | 0.59 | 46.0 | 4.83e-01 | 89.6% | 98.3% |
| 3928420 | 3680.1.1.0 ↗ | a+b complex topology › Zinc finger FYVE domain-containing protein 9 C-terminal domain › Zinc finger FYVE domain-containing protein 9 C-terminal domain › Zinc finger FYVE domain-containing protein 9 C-terminal domain | 0.58 | 40.0 | 3.11e-01 | 71.6% | 89.3% |
| 5049794 | 301.1.1.2 ↗ | a+b three layers › Bacillus chorismate mutase-like › L30e-like › L30e-like › eRF1_3 | 0.57 | 42.0 | 3.37e-01 | 88.1% | 37.2% |
| 3898349 | 4121.1.1.2 ↗ | a+b three layers › CorA soluble domain-like › CorA soluble domain-like › CorA soluble domain-like › MRS2-like | 0.56 | 49.0 | 3.42e-01 | 100.0% | 70.6% |
| 4477952 | 2004.1.1.63 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › FtsK_SpoIIIE | 0.56 | 43.0 | 2.83e-01 | 82.1% | 27.9% |
| 4979507 | 301.1.1.2 ↗ | a+b three layers › Bacillus chorismate mutase-like › L30e-like › L30e-like › eRF1_3 | 0.56 | 41.0 | 3.24e-01 | 89.6% | 35.6% |
| 5059024 | 11.1.4.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like | 0.56 | 35.0 | 3.17e-01 | 85.1% | 46.7% |
| 5071156 | 3714.1.1.1 ↗ | a+b two layers › Lon-like protease MtaLonC helical domain › Lon-like protease MtaLonC helical domain › Lon-like protease MtaLonC helical domain › LonC_helical | 0.56 | 43.0 | 3.16e-01 | 86.6% | 100.0% |
| 3958897 | 4187.2.1.0 ↗ | a+b two layers › NosL/MerB-like › DUF2233 › DUF2233 | 0.55 | 36.0 | 3.02e-01 | 85.1% | 37.5% |
| 5007504 | 4121.1.1.1 ↗ | a+b three layers › CorA soluble domain-like › CorA soluble domain-like › CorA soluble domain-like › CorA | 0.55 | 48.0 | 3.22e-01 | 98.5% | 57.7% |
| 2426538 | 375.1.1.26 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Rpr2 | 0.55 | 36.0 | 2.96e-01 | 88.1% | 38.0% |
| 3929359 | 382.1.1.0 ↗ | few secondary structure elements › Snake toxin-like › Snake toxin-like › Snake toxin-like | 0.54 | 47.0 | 4.04e-01 | 100.0% | 85.3% |
| 4371334 | 382.1.1.0 ↗ | few secondary structure elements › Snake toxin-like › Snake toxin-like › Snake toxin-like | 0.54 | 36.0 | 3.27e-01 | 86.6% | 49.5% |
| 3592970 | 206.1.1.0 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase | 0.53 | 44.0 | 2.96e-01 | 95.5% | 32.7% |
| 3760738 | 4357.1.1.9 ↗ | beta barrels › WWE domain › WWE domain › WWE domain › WWE, WWE_3 | 0.53 | 42.0 | 3.27e-01 | 86.6% | 55.0% |
| 4943252 | 301.1.1.2 ↗ | a+b three layers › Bacillus chorismate mutase-like › L30e-like › L30e-like › eRF1_3 | 0.53 | 39.0 | 3.11e-01 | 88.1% | 37.2% |
| 3700547 | 109.4.1.22 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Adaptin_N | 0.52 | 45.0 | 2.64e-01 | 98.5% | 16.0% |
| 5039172 | 10.4.1.0 ↗ | beta sandwiches › jelly-roll › Spermadhesin, CUB domain › Spermadhesin, CUB domain | 0.52 | 40.0 | 3.41e-01 | 85.1% | 68.7% |
| 5034902 | 301.1.1.2 ↗ | a+b three layers › Bacillus chorismate mutase-like › L30e-like › L30e-like › eRF1_3 | 0.52 | 37.0 | 2.95e-01 | 88.1% | 35.2% |
| 3274193 | 206.1.1.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase | 0.52 | 45.0 | 2.52e-01 | 97.0% | 13.6% |
| 5068996 | 11.1.4.23 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like › CarboxypepD_reg | 0.51 | 31.0 | 2.98e-01 | 85.1% | 51.2% |
| 4030365 | 245.1.1.0 ↗ | a+b two layers › Ribonuclease PH domain 2-like › Ribonuclease PH domain 2 › Ribonuclease PH domain 2 | 0.51 | 36.0 | 3.10e-01 | 74.6% | 81.0% |
| 3393267 | 7579.1.1.2 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › Lipase | 0.50 | 37.0 | 2.45e-01 | 82.1% | 89.1% |
| 5026836 | 11.1.4.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like | 0.50 | 32.0 | 3.20e-01 | 85.1% | 61.4% |