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QRG24151.1

Arc-Vir

MW344765__QRG24151.1__HrrHm1-200__00040

Identity

Accession:
MW344765 ↗
Protein ID:
QRG24151.1 ↗
Kingdom:
archaea

Quality

95.7 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Kirjokansivirales› Graaviviridae› Halorubrum_virus_Humcor1

TaxID: 2809244

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 4-137
PDB
Domain cluster: rep: NC_049949.1__YP_009909686.1__H3V31_gp49__00049__D11-175
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF22398.2 best DUF6978 55.5 1.00e-14 90.3% 98.5%
CATH (13)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2xn1A01 2.70.98.60 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › alpha-galactosidase from lactobacil brevis 0.61 45.0 3.44e-01 76.9% 68.1%
4bboA00 2.40.128.30 Mainly Beta › Beta Barrel › Lipocalin › Avidin-like 0.60 36.0 3.86e-01 82.1% 69.0%
4bumX00 2.40.160.10 Mainly Beta › Beta Barrel › Porin › Porin 0.59 40.0 3.15e-01 70.9% 32.9%
3obaA05 2.70.98.10 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › 0.59 42.0 3.32e-01 74.6% 68.6%
1jovA00 2.70.98.10 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › 0.57 42.0 3.34e-01 75.4% 63.2%
1yq2A05 2.70.98.10 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › 0.54 40.0 3.13e-01 76.9% 71.3%
6secA03 2.70.98.10 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › 0.54 40.0 3.22e-01 79.1% 87.0%
4n4bA00 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.54 45.0 3.44e-01 91.0% 85.3%
3bgaA05 2.70.98.10 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › 0.53 40.0 3.26e-01 79.9% 81.9%
1lkeA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.53 36.0 3.49e-01 90.3% 59.9%
1uv4A00 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.53 43.0 3.41e-01 89.6% 89.7%
3kstA00 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.51 37.0 2.99e-01 76.1% 84.9%
2yfsA01 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.51 39.0 2.73e-01 82.1% 74.0%
ECOD (17)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4225063 3840.1.1.2 ↗ a+b two layers › Bacterial conjugation factor PsiB › Bacterial conjugation factor PsiB › Bacterial conjugation factor PsiB › PerB 0.67 39.0 4.27e-01 82.8% 70.0%
3218185 2484.1.1.0 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.63 42.0 3.56e-01 92.5% 41.9%
4283763 12.3.1.6 ↗ beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › Bgal_small_N 0.61 45.0 3.51e-01 75.4% 69.0%
3221927 207.1.1.81 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › FTH 0.59 43.0 3.34e-01 97.8% 34.8%
4008120 5.1.5.139 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › DUF1481 0.59 43.0 4.51e-01 89.6% 85.0%
2012 12.3.1.3 ↗ beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › Aldose_epim 0.57 42.0 3.34e-01 75.4% 63.2%
3169357 331.4.1.0 ↗ a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 0.57 34.0 3.69e-01 70.9% 70.9%
4943345 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.55 39.0 4.44e-01 91.8% 99.0%
3812869 284.1.3.0 ↗ a+b two layers › FKBP-like › FKBP-like › WNK1 autoinhibitory domain 0.55 39.0 4.42e-01 89.6% 99.0%
3388787 719.1.1.1 ↗ beta barrels › XRCC4, N-terminal domain-like › XRCC4, N-terminal domain › XRCC4, N-terminal domain › XRCC4 0.54 34.0 3.52e-01 85.8% 67.2%
5009522 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.53 45.0 3.27e-01 91.0% 89.7%
3548538 11.1.1.99 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › V-set 0.52 36.0 2.95e-01 70.9% 94.8%
3255634 5.1.3.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.52 41.0 2.97e-01 84.3% 74.5%
1710650 3692.1.1.0 ↗ a+b two layers › Ornithine cyclodeaminase-like enzymes dimerization domain › Ornithine cyclodeaminase-like enzymes dimerization domain › Ornithine cyclodeaminase-like enzymes dimerization domain 0.51 36.0 4.11e-01 88.8% 96.1%
3163979 71.1.1.4 ↗ beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › MucB_RseB 0.51 41.0 3.65e-01 85.1% 70.0%
5025792 3692.1.1.1 ↗ a+b two layers › Ornithine cyclodeaminase-like enzymes dimerization domain › Ornithine cyclodeaminase-like enzymes dimerization domain › Ornithine cyclodeaminase-like enzymes dimerization domain › OCD_Mu_crystall 0.51 38.0 4.09e-01 88.8% 90.4%
3315068 264.2.1.0 ↗ beta barrels › LigT-like › Prokaryotic type I DNA topoisomerase beta-barrel domain › Prokaryotic type I DNA topoisomerase beta-barrel domain 0.50 33.0 3.24e-01 93.3% 60.0%