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QRG24175.1

Arc-Vir

MW344765__QRG24175.1__HrrHm1-330__00064

Identity

Accession:
MW344765 ↗
Protein ID:
QRG24175.1 ↗
Kingdom:
archaea

Quality

85.3 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 12-82
PDB
Domain cluster: representative
CATH (70)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3k0yA01 2.40.50.500 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › NigD-like N-terminal OB domain 0.79 67.0 7.01e-01 97.2% 100.0%
1v1qA00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.78 71.0 6.08e-01 100.0% 90.0%
3k0xA00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.78 67.0 5.96e-01 100.0% 66.7%
3tssA02 2.40.50.110 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.76 64.0 6.48e-01 91.5% 100.0%
3mxnB00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.76 70.0 5.61e-01 100.0% 54.2%
3k6oA01 2.40.50.500 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › NigD-like N-terminal OB domain 0.76 69.0 6.91e-01 100.0% 100.0%
4pofA02 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.76 70.0 6.07e-01 100.0% 86.5%
3go5A03 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.75 62.0 6.27e-01 91.5% 91.4%
4me3A02 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.75 69.0 6.14e-01 100.0% 86.6%
1eu3A02 2.40.50.110 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.74 66.0 6.40e-01 100.0% 100.0%
4pqxA01 2.40.50.500 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › NigD-like N-terminal OB domain 0.74 67.0 6.64e-01 97.2% 100.0%
1ty0A02 2.40.50.110 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.74 66.0 6.48e-01 98.6% 100.0%
1an8A02 2.40.50.110 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.74 66.0 6.51e-01 98.6% 98.7%
2asbA01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.74 61.0 6.04e-01 90.1% 96.0%
5jpnC02 2.40.50.120 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.74 67.0 5.16e-01 100.0% 58.0%
2c35B02 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.73 64.0 5.94e-01 97.2% 100.0%
6rupA00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.73 67.0 5.74e-01 100.0% 94.6%
4glaC00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.73 65.0 6.03e-01 100.0% 94.4%
3k7uC00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.73 66.0 5.91e-01 100.0% 94.9%
2j4xA02 2.40.50.110 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.73 65.0 6.52e-01 100.0% 97.2%
2f4iA02 2.40.50.420 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Envelope glycoprotein gp160, DUF2291, alpha/beta domain 0.73 65.0 5.49e-01 98.6% 71.3%
3u4vA00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.72 64.0 5.43e-01 100.0% 76.7%
4hspA00 2.40.50.870 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Protein of unknown function (DUF3299) 0.71 64.0 5.02e-01 100.0% 61.7%
4c3iG02 2.40.50.1060 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.71 59.0 4.73e-01 91.5% 58.3%
1sxvA00 3.90.80.10 Alpha Beta › Alpha-Beta Complex › Inorganic Pyrophosphatase › Inorganic pyrophosphatase 0.71 59.0 4.59e-01 93.0% 62.5%
4joiC00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.71 64.0 5.39e-01 100.0% 63.6%
1e9gB00 3.90.80.10 Alpha Beta › Alpha-Beta Complex › Inorganic Pyrophosphatase › Inorganic pyrophosphatase 0.71 60.0 3.97e-01 93.0% 42.8%
5teaB00 3.90.80.10 Alpha Beta › Alpha-Beta Complex › Inorganic Pyrophosphatase › Inorganic pyrophosphatase 0.71 61.0 4.55e-01 94.4% 57.5%
2rf4E02 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.71 58.0 5.59e-01 91.5% 100.0%
1o7iB00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.71 62.0 5.36e-01 100.0% 74.6%
5wrtB00 3.90.80.10 Alpha Beta › Alpha-Beta Complex › Inorganic Pyrophosphatase › Inorganic pyrophosphatase 0.71 59.0 4.11e-01 93.0% 51.7%
2kctA01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.70 64.0 5.96e-01 100.0% 88.5%
4mtnA02 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.70 57.0 5.94e-01 88.7% 100.0%
1xweA01 2.40.50.120 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.70 63.0 4.99e-01 100.0% 65.0%
1y14D02 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.70 60.0 5.62e-01 95.8% 100.0%
5lm7A02 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.69 58.0 5.70e-01 93.0% 85.9%
3go5A01 2.40.50.330 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.69 53.0 5.37e-01 93.0% 83.1%
2je6I02 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.69 62.0 5.79e-01 100.0% 92.0%
5gqoA00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.68 59.0 5.43e-01 100.0% 89.7%
2id0A02 2.40.50.640 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.68 61.0 6.07e-01 100.0% 97.3%
6we5A00 3.90.80.10 Alpha Beta › Alpha-Beta Complex › Inorganic Pyrophosphatase › Inorganic pyrophosphatase 0.68 57.0 4.15e-01 94.4% 57.8%
2nttA02 2.40.50.110 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.68 59.0 6.00e-01 100.0% 100.0%
2r61A02 2.40.50.110 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.68 56.0 5.61e-01 94.4% 95.9%
4xzjA01 3.90.176.10 Alpha Beta › Alpha-Beta Complex › Toxin ADP-ribosyltransferase; Chain A, domain 1 › Toxin ADP-ribosyltransferase; Chain A, domain 1 0.67 57.0 4.09e-01 94.4% 42.2%
1jjgA00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.67 57.0 5.02e-01 93.0% 69.6%
1gzeA00 3.90.176.10 Alpha Beta › Alpha-Beta Complex › Toxin ADP-ribosyltransferase; Chain A, domain 1 › Toxin ADP-ribosyltransferase; Chain A, domain 1 0.67 58.0 4.12e-01 95.8% 40.1%
1wi5A01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.67 55.0 5.49e-01 93.0% 97.3%
1yqyA01 3.90.176.10 Alpha Beta › Alpha-Beta Complex › Toxin ADP-ribosyltransferase; Chain A, domain 1 › Toxin ADP-ribosyltransferase; Chain A, domain 1 0.66 56.0 4.03e-01 93.0% 37.3%
3zjyC00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.66 55.0 5.44e-01 98.6% 86.5%
6k93A00 3.90.176.10 Alpha Beta › Alpha-Beta Complex › Toxin ADP-ribosyltransferase; Chain A, domain 1 › Toxin ADP-ribosyltransferase; Chain A, domain 1 0.66 56.0 3.84e-01 93.0% 32.6%
1ixrA01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.66 51.0 5.36e-01 90.1% 96.8%
2iciA02 2.40.50.110 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.65 57.0 5.57e-01 100.0% 100.0%
1qs1A02 3.90.176.10 Alpha Beta › Alpha-Beta Complex › Toxin ADP-ribosyltransferase; Chain A, domain 1 › Toxin ADP-ribosyltransferase; Chain A, domain 1 0.65 55.0 3.98e-01 93.0% 43.1%
1fnuA01 2.40.50.110 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.65 57.0 5.50e-01 98.6% 100.0%
2dgyA01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.64 53.0 5.13e-01 95.8% 82.3%
1cukA01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.64 50.0 5.18e-01 91.5% 95.5%
2rdgA02 2.40.50.110 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.64 55.0 5.55e-01 98.6% 98.6%
1bvsA01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.64 52.0 5.39e-01 93.0% 100.0%
2vnuD02 2.40.50.700 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.63 54.0 5.36e-01 100.0% 97.4%
1enfA01 2.40.50.110 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.63 53.0 5.20e-01 97.2% 98.7%
7tuvA02 2.40.50.700 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.62 52.0 4.93e-01 94.4% 82.8%
4da2A01 2.40.50.580 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.62 50.0 4.88e-01 97.2% 81.0%
1jt8A00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.62 52.0 4.67e-01 100.0% 66.7%
2wkcB00 2.40.50.400 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Lactococcus phage single-stranded DNA binding protein 0.61 51.0 4.85e-01 100.0% 98.9%
4dapA01 2.40.50.580 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.59 49.0 4.78e-01 100.0% 87.5%
3q91B00 3.90.79.10 Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase 0.57 38.0 3.22e-01 70.4% 67.2%
3mc0B02 2.40.50.110 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.56 46.0 4.47e-01 98.6% 95.2%
1qs1A01 3.90.176.10 Alpha Beta › Alpha-Beta Complex › Toxin ADP-ribosyltransferase; Chain A, domain 1 › Toxin ADP-ribosyltransferase; Chain A, domain 1 0.56 45.0 3.31e-01 90.1% 40.4%
3f13B00 3.90.79.10 Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase 0.54 37.0 3.00e-01 70.4% 53.8%
4f54A00 3.30.160.670 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.51 43.0 3.34e-01 100.0% 45.9%
ECOD (94)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4956738 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.81 71.0 6.41e-01 100.0% 70.5%
3164941 129.1.1.99 alpha arrays › 6-phosphogluconate dehydrogenase C-terminal domain-like › 6-phosphogluconate dehydrogenase C-terminal domain-like › 6-phosphogluconate dehydrogenase C-terminal domain-like › DUF4131 0.81 75.0 6.62e-01 100.0% 94.0%
3838219 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.79 72.0 6.78e-01 98.6% 91.8%
3228963 2.1.1.311 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › PF31223 0.78 72.0 6.36e-01 100.0% 79.0%
4937552 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.78 69.0 6.01e-01 100.0% 65.4%
3726706 2.1.1.43 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Rep_fac-A_3 0.77 69.0 5.66e-01 100.0% 56.7%
3496962 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.76 69.0 6.36e-01 100.0% 88.9%
1144506 2.2.1.0 beta barrels › OB-fold › Bacterial enterotoxins › Bacterial enterotoxins 0.76 69.0 6.28e-01 100.0% 81.9%
868431 2.18.1.1 beta barrels › OB-fold › OB domain in putative lipoprotein BF3042-related proteins › OB domain in putative lipoprotein BF3042-related proteins › NigD_N 0.76 70.0 6.78e-01 100.0% 92.3%
3244961 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.76 63.0 5.94e-01 93.0% 75.3%
1175458 2.18.1.1 beta barrels › OB-fold › OB domain in putative lipoprotein BF3042-related proteins › OB domain in putative lipoprotein BF3042-related proteins › NigD_N 0.76 69.0 6.91e-01 100.0% 100.0%
5030363 2.1.1.80 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › MCM_OB 0.76 70.0 5.94e-01 100.0% 83.6%
1871017 2.3.1.2 beta barrels › OB-fold › TIMP-like › TIMP-like › NTR 0.76 68.0 5.13e-01 100.0% 54.2%
4272096 2.1.1.57 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › RecO_N 0.75 68.0 6.25e-01 100.0% 94.4%
1297326 2.18.1.1 beta barrels › OB-fold › OB domain in putative lipoprotein BF3042-related proteins › OB domain in putative lipoprotein BF3042-related proteins › NigD_N 0.75 69.0 6.73e-01 100.0% 98.7%
3997675 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.75 62.0 5.70e-01 90.1% 71.1%
3485634 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.74 63.0 6.11e-01 93.0% 87.5%
3624905 2.1.1.253 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › PF29478 0.74 62.0 6.35e-01 93.0% 94.2%
4948357 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.74 63.0 5.98e-01 98.6% 78.6%
4487060 2.1.1.38 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › OB_RNB 0.74 60.0 6.25e-01 94.4% 96.9%
4952176 2.18.1.0 beta barrels › OB-fold › OB domain in putative lipoprotein BF3042-related proteins › OB domain in putative lipoprotein BF3042-related proteins 0.74 68.0 6.69e-01 100.0% 100.0%
5051423 2.1.1.67 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Ten1_2 0.73 65.0 5.69e-01 100.0% 66.7%
4140237 2.1.1.88 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › CSD2 0.73 66.0 6.10e-01 100.0% 80.0%
165635 2.2.1.1 beta barrels › OB-fold › Bacterial enterotoxins › Bacterial enterotoxins › Stap_Strp_toxin 0.73 65.0 6.09e-01 98.6% 81.2%
3473720 2.1.1.6 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › SSB 0.73 66.0 5.69e-01 100.0% 90.0%
3998577 2.1.1.253 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › PF29478 0.73 58.0 6.02e-01 88.7% 93.8%
3680255 2.1.1.67 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Ten1_2 0.73 64.0 5.55e-01 98.6% 69.7%
3598416 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.73 65.0 6.07e-01 97.2% 91.8%
3827541 2.1.1.7 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › S1 0.72 61.0 5.63e-01 93.0% 74.4%
4012938 2.5.1.0 beta barrels › OB-fold › Inorganic pyrophosphatase › Inorganic pyrophosphatase 0.72 61.0 4.02e-01 93.0% 44.1%
3356732 2.1.1.67 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Ten1_2 0.72 64.0 5.39e-01 100.0% 60.0%
4104013 2.1.1.88 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › CSD2 0.72 63.0 5.80e-01 100.0% 76.7%
3413155 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.72 60.0 5.95e-01 93.0% 88.0%
3388514 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.72 63.0 6.01e-01 100.0% 90.6%
3707273 2.5.1.1 beta barrels › OB-fold › Inorganic pyrophosphatase › Inorganic pyrophosphatase › Pyrophosphatase 0.71 61.0 4.15e-01 94.4% 49.2%
3511418 2.1.1.38 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › OB_RNB 0.71 60.0 6.09e-01 98.6% 92.9%
4652157 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.71 61.0 5.36e-01 98.6% 79.1%
3514141 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.71 61.0 6.02e-01 94.4% 90.7%
3508632 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.71 61.0 6.06e-01 95.8% 90.7%
4535633 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.71 61.0 6.05e-01 95.8% 97.3%
3250324 2.1.1.69 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › RMI2 0.71 65.0 5.20e-01 100.0% 60.0%
3164798 2.5.1.1 beta barrels › OB-fold › Inorganic pyrophosphatase › Inorganic pyrophosphatase › Pyrophosphatase 0.71 60.0 4.52e-01 94.4% 57.1%
3212469 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.71 62.0 5.13e-01 100.0% 62.3%
4302926 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.70 64.0 5.34e-01 100.0% 64.2%
4446764 2.5.1.1 beta barrels › OB-fold › Inorganic pyrophosphatase › Inorganic pyrophosphatase › Pyrophosphatase 0.70 60.0 4.47e-01 94.4% 56.6%
3587502 2.1.1.38 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › OB_RNB 0.70 61.0 6.02e-01 100.0% 93.3%
3487989 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.70 61.0 5.32e-01 98.6% 82.7%
3947390 2.5.1.1 beta barrels › OB-fold › Inorganic pyrophosphatase › Inorganic pyrophosphatase › Pyrophosphatase 0.70 59.0 4.52e-01 94.4% 61.8%
3989629 2.1.1.38 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › OB_RNB 0.70 61.0 6.13e-01 100.0% 100.0%
3245695 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.69 62.0 6.02e-01 100.0% 91.3%
3702234 2.1.1.3 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › CSD 0.69 63.0 6.04e-01 100.0% 91.3%
3626166 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.69 62.0 5.88e-01 100.0% 85.9%
3726200 2.5.1.1 beta barrels › OB-fold › Inorganic pyrophosphatase › Inorganic pyrophosphatase › Pyrophosphatase 0.69 59.0 3.92e-01 94.4% 43.6%
4943334 2.5.1.1 beta barrels › OB-fold › Inorganic pyrophosphatase › Inorganic pyrophosphatase › Pyrophosphatase 0.69 58.0 4.34e-01 94.4% 55.0%
4950974 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.69 59.0 5.24e-01 97.2% 70.5%
5052552 2.5.1.1 beta barrels › OB-fold › Inorganic pyrophosphatase › Inorganic pyrophosphatase › Pyrophosphatase 0.69 58.0 4.36e-01 94.4% 57.1%
3513289 2.1.1.63 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › S1_2 0.69 54.0 5.58e-01 93.0% 92.3%
3990153 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.68 58.0 5.72e-01 97.2% 100.0%
4390251 2.1.1.14 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › RuvA_N 0.68 54.0 5.80e-01 91.5% 100.0%
4436860 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.68 54.0 5.58e-01 91.5% 95.4%
4246562 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.68 60.0 5.49e-01 100.0% 76.8%
3485636 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.68 59.0 5.45e-01 95.8% 77.8%
3219482 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.68 60.0 5.98e-01 98.6% 96.0%
5051593 2.1.1.11 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › eIF-1a 0.68 60.0 5.21e-01 100.0% 81.8%
3935866 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.68 59.0 5.24e-01 100.0% 74.3%
4046191 2.1.1.14 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › RuvA_N 0.67 56.0 5.49e-01 94.4% 85.3%
3229352 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.67 55.0 5.45e-01 97.2% 86.7%
3212056 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.66 57.0 5.57e-01 100.0% 100.0%
4096999 2.1.1.14 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › RuvA_N 0.66 52.0 5.42e-01 91.5% 96.9%
4407567 2.1.1.14 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › RuvA_N 0.66 52.0 5.40e-01 91.5% 96.9%
4458321 2.1.1.14 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › RuvA_N 0.66 51.0 5.34e-01 91.5% 95.4%
4069150 2.1.1.14 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › RuvA_N 0.65 51.0 5.25e-01 91.5% 95.4%
4225130 2.2.1.1 beta barrels › OB-fold › Bacterial enterotoxins › Bacterial enterotoxins › Stap_Strp_toxin 0.65 56.0 4.86e-01 100.0% 65.2%
4322651 2.1.1.14 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › RuvA_N 0.65 50.0 5.20e-01 91.5% 95.4%
3992357 2.1.1.11 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › eIF-1a 0.64 56.0 4.81e-01 98.6% 73.9%
4668516 2.1.1.14 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › RuvA_N 0.64 50.0 5.18e-01 91.5% 95.4%
4506647 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.64 50.0 5.17e-01 91.5% 95.4%
3281927 2.4.1.2 beta barrels › OB-fold › MOP-like › MOP-like › TOBE_2 0.64 55.0 4.56e-01 95.8% 98.4%
4330612 2.1.1.14 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › RuvA_N 0.63 49.0 5.08e-01 91.5% 95.4%
4038328 2.1.1.14 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › RuvA_N 0.63 49.0 5.05e-01 91.5% 95.4%
4058131 2.1.1.83 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › SfsA_N 0.63 51.0 5.00e-01 97.2% 82.5%
4981994 2.1.1.83 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › SfsA_N 0.63 54.0 5.25e-01 100.0% 87.5%
4059805 2.1.1.14 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › RuvA_N 0.63 51.0 5.29e-01 94.4% 100.0%
4182979 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.63 52.0 5.40e-01 90.1% 100.0%
4534526 2.1.1.14 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › RuvA_N 0.62 48.0 4.94e-01 91.5% 95.4%
4962084 2.1.1.83 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › SfsA_N 0.61 51.0 5.07e-01 98.6% 89.3%
4046557 2.1.1.14 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › RuvA_N 0.61 47.0 4.90e-01 91.5% 95.4%
4264254 2.1.1.14 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › RuvA_N 0.61 50.0 4.93e-01 94.4% 86.7%
3958012 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.61 49.0 4.59e-01 94.4% 71.1%
4551354 2.1.1.14 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › RuvA_N 0.60 48.0 4.75e-01 93.0% 85.3%
4316390 2.1.1.14 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › RuvA_N 0.57 46.0 4.74e-01 90.1% 100.0%
3604459 2.1.1.17 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › OB_aCoA_assoc 0.56 46.0 4.03e-01 93.0% 79.1%
4962355 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.55 46.0 4.08e-01 97.2% 92.7%
5024446 2.1.1.17 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › OB_aCoA_assoc 0.55 48.0 4.43e-01 97.2% 92.2%
D2 medium residues 109-160
PDB
Domain cluster: representative
CATH (28)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1afcA00 2.80.10.50 Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › 0.65 51.0 3.89e-01 88.5% 82.7%
4govA01 2.80.10.50 Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › 0.64 46.0 3.46e-01 76.9% 36.6%
1jlxA02 2.80.10.50 Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › 0.64 48.0 3.63e-01 86.5% 82.1%
7zoiA01 2.80.10.50 Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › 0.63 49.0 3.88e-01 90.4% 84.4%
2x2sC00 2.80.10.50 Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › 0.63 50.0 3.71e-01 92.3% 80.4%
5g56A03 2.80.10.50 Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › 0.62 49.0 3.83e-01 92.3% 82.3%
3kreA02 3.30.470.20 Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › ATP-grasp fold, B domain 0.62 42.0 3.15e-01 73.1% 44.3%
2vugA03 3.30.470.30 Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › DNA ligase/mRNA capping enzyme 0.61 41.0 3.34e-01 71.2% 69.6%
1q1uA00 2.80.10.50 Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › 0.61 49.0 3.69e-01 92.3% 80.4%
3vsfA02 2.80.10.50 Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › 0.60 48.0 3.64e-01 92.3% 82.9%
2krsA01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.59 42.0 4.05e-01 92.3% 66.7%
3e1sA04 2.30.30.940 Mainly Beta › Roll › SH3 type barrels. › 0.59 42.0 3.98e-01 96.2% 59.4%
1pg5B02 2.30.30.20 Mainly Beta › Roll › SH3 type barrels. › Aspartate carbamoyltransferase regulatory subunit, C-terminal domain 0.59 46.0 4.48e-01 96.2% 80.7%
2mdiA00 2.20.70.10 Mainly Beta › Single Sheet › Ubiquitin Ligase Nedd4; Chain: W; › 0.58 41.0 4.06e-01 96.2% 73.2%
1ybyA02 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.57 40.0 3.79e-01 75.0% 92.2%
1u2kA02 1.10.420.10 Mainly Alpha › Orthogonal Bundle › Peroxidase; domain 2 › Peroxidase, domain 2 0.56 45.0 3.57e-01 98.1% 48.4%
4m4zA01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.56 38.0 4.00e-01 84.6% 80.9%
1pwaA00 2.80.10.50 Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › 0.56 44.0 3.46e-01 90.4% 75.6%
2hi2A00 3.30.700.10 Alpha Beta › 2-Layer Sandwich › Glycoprotein, Type 4 Pilin › Glycoprotein, Type 4 Pilin 0.56 39.0 2.89e-01 76.9% 79.0%
2w4oA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.54 38.0 3.47e-01 76.9% 83.1%
6e55A01 2.30.30.90 Mainly Beta › Roll › SH3 type barrels. › Ferrous iron transport protein A (FeoA) 0.54 42.0 3.90e-01 100.0% 67.6%
3e19B01 2.30.30.90 Mainly Beta › Roll › SH3 type barrels. › Ferrous iron transport protein A (FeoA) 0.54 40.0 3.90e-01 98.1% 71.9%
1nqzA00 3.90.79.10 Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase 0.53 44.0 3.19e-01 100.0% 74.3%
2p39A00 2.80.10.50 Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › 0.53 41.0 3.16e-01 92.3% 74.6%
3goxA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.53 37.0 3.78e-01 98.1% 78.4%
2eifA02 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.52 37.0 3.61e-01 76.9% 94.9%
4b6dB00 3.30.60.20 Alpha Beta › 2-Layer Sandwich › Wheat Germ Agglutinin (Isolectin 2); domain 1 › 0.51 35.0 3.47e-01 75.0% 80.7%
5dmhB02 3.40.980.20 Alpha Beta › 3-Layer(aba) Sandwich › Molybdenum Cofactor Biosythetic Enzyme; Chain A › Four-carbon acid sugar kinase, nucleotide binding domain 0.50 36.0 2.60e-01 80.8% 31.1%
ECOD (34)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3199196 375.8.1.0 few secondary structure elements › Rubredoxin-like › Zinc-binding domain of translation initiation factor 2 beta › Zinc-binding domain of translation initiation factor 2 beta 0.70 41.0 4.72e-01 75.0% 85.7%
3463553 3860.1.1.56 alpha bundles › Myosin VI lever arm › Myosin VI lever arm › Myosin VI lever arm › XH 0.66 44.0 3.54e-01 75.0% 35.0%
3451552 375.1.4.0 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Aspartate carbamoyltransferase, Regulatory-chain, C-terminal domain 0.65 49.0 4.86e-01 92.3% 77.8%
4026161 4.1.1.7 beta barrels › SH3 › SH3 › SH3 › KOW,ribosomal_L24 0.62 41.0 3.19e-01 86.5% 28.8%
3188595 708.1.2.0 beta complex topology › ETN0001 domain-like › ETN0001 domain-like › Mss4-like 0.62 45.0 3.18e-01 80.8% 66.1%
3229548 375.1.1.0 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.61 42.0 4.41e-01 92.3% 82.2%
3486061 386.1.1.0 few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers 0.61 44.0 2.97e-01 80.8% 28.0%
5032251 375.1.1.0 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.60 39.0 4.14e-01 82.7% 77.8%
3823898 386.1.1.0 few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers 0.60 41.0 4.04e-01 71.2% 78.2%
4217957 219.1.1.79 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Transglut_core2 0.59 46.0 3.32e-01 88.5% 58.8%
5055823 212.1.1.3 a+b two layers › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › GHMP_kinases_N 0.58 40.0 2.80e-01 73.1% 45.9%
4934260 375.1.1.0 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.58 39.0 3.87e-01 88.5% 68.5%
3899844 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.57 47.0 3.82e-01 100.0% 74.8%
3201380 376.1.2.0 few secondary structure elements › RING/U-box-like › RING/U-box-like › Cysteine-rich domain 0.57 43.0 4.39e-01 82.7% 96.0%
5074404 375.1.4.1 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Aspartate carbamoyltransferase, Regulatory-chain, C-terminal domain › PyrI_C 0.56 44.0 4.38e-01 94.2% 83.6%
3975782 7529.1.1.1 a/b three-layered sandwiches › Macro domain-like › Macro domain-like › Macro domain-like › Macro 0.55 41.0 2.76e-01 84.6% 19.6%
5070745 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.55 38.0 4.02e-01 82.7% 86.7%
4947995 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.54 38.0 3.78e-01 78.8% 72.7%
3330943 4.1.1.43 beta barrels › SH3 › SH3 › SH3 › SMN_Tudor 0.54 39.0 3.90e-01 100.0% 76.4%
3259044 4.1.1.54 beta barrels › SH3 › SH3 › SH3 › SH3_2 0.53 40.0 4.00e-01 98.1% 81.8%
3482614 376.1.2.0 few secondary structure elements › RING/U-box-like › RING/U-box-like › Cysteine-rich domain 0.53 36.0 3.39e-01 73.1% 75.7%
1140051 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.53 39.0 3.97e-01 98.1% 85.7%
3194447 206.1.1.1 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase 0.53 37.0 2.24e-01 75.0% 19.8%
3570399 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.52 37.0 3.51e-01 76.9% 69.2%
3909317 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.52 35.0 3.55e-01 75.0% 72.0%
4601352 2005.1.1.0 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains 0.52 44.0 2.51e-01 98.1% 13.7%
3791430 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.52 40.0 4.00e-01 100.0% 85.5%
3259047 376.1.2.1 few secondary structure elements › RING/U-box-like › RING/U-box-like › Cysteine-rich domain › C1_1 0.51 36.0 3.60e-01 76.9% 83.6%
3955489 2484.1.1.211 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › OrfB_IS605, Cas12f1-like_TNB 0.51 37.0 2.57e-01 82.7% 22.4%
4957998 2008.1.1.0 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like 0.51 33.0 2.56e-01 75.0% 26.9%
3673072 376.1.2.2 few secondary structure elements › RING/U-box-like › RING/U-box-like › Cysteine-rich domain › C1_2 0.51 36.0 3.50e-01 82.7% 93.8%
5072382 7502.1.1.1 a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › HGTP_anticodon 0.50 35.0 2.90e-01 75.0% 68.0%
3610398 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.50 34.0 3.07e-01 71.2% 48.0%
5040416 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.50 35.0 3.57e-01 80.8% 80.0%