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QRG24217.1
Arc-VirMW344767__QRG24217.1__HarHp1-105__00020
Identity
- Accession:
- MW344767 ↗
- Protein ID:
- QRG24217.1 ↗
- Kingdom:
- archaea
Quality
91.6
mean pLDDT
Taxonomy
Trapavirae›
Saleviricota›
Huolimaviricetes›
Haloruvirales›
Pleolipoviridae›
Haloarcula_virus_Harhisp1
TaxID: 2809246
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 246-362
Domain cluster:
rep: IMGVR_UViG_3300002149_000177-3300002149-C687J26657_1000155810__D30-137
CATH (30)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4i8oA02 | 3.30.160.690 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Bacterial toxin RNase RnlA/LsoA, N repeated domain | 0.69 | 48.0 | 5.34e-01 | 79.5% | 93.3% |
| 1tluA00 | 3.60.90.10 | Alpha Beta › 4-Layer Sandwich › S-adenosylmethionine decarboxylase › S-adenosylmethionine decarboxylase | 0.67 | 53.0 | 5.34e-01 | 83.8% | 85.5% |
| 2w7vA00 | 3.30.1360.100 | Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › General secretion pathway protein M, EpsM | 0.67 | 36.0 | 4.17e-01 | 73.5% | 73.2% |
| 5hl8C00 | 3.30.1360.100 | Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › General secretion pathway protein M, EpsM | 0.66 | 34.0 | 4.00e-01 | 71.8% | 70.9% |
| 7ewsB02 | 3.30.590.10 | Alpha Beta › 2-Layer Sandwich › Creatine Kinase; Chain A, domain 2 › Glutamine synthetase/guanido kinase, catalytic domain | 0.65 | 53.0 | 4.15e-01 | 88.0% | 65.1% |
| 1vr8A00 | 3.40.1000.20 | Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › TM1622-like | 0.63 | 46.0 | 4.42e-01 | 76.1% | 96.3% |
| 2lqjA00 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.63 | 45.0 | 4.92e-01 | 88.0% | 91.5% |
| 1z94B00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.62 | 54.0 | 5.08e-01 | 94.9% | 96.5% |
| 4z9mB02 | 3.30.590.10 | Alpha Beta › 2-Layer Sandwich › Creatine Kinase; Chain A, domain 2 › Glutamine synthetase/guanido kinase, catalytic domain | 0.60 | 54.0 | 4.53e-01 | 98.3% | 83.3% |
| 3s1tA02 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.60 | 40.0 | 4.62e-01 | 98.3% | 97.5% |
| 1d1jB00 | 3.30.450.30 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Dynein light chain 2a, cytoplasmic | 0.59 | 45.0 | 4.29e-01 | 78.6% | 77.9% |
| 3w9kA00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.59 | 52.0 | 5.01e-01 | 96.6% | 90.4% |
| 7cu8E01 | 3.40.1000.70 | Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › PknH-like extracellular domain | 0.59 | 44.0 | 3.81e-01 | 78.6% | 84.1% |
| 4qwoB00 | 3.30.450.30 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Dynein light chain 2a, cytoplasmic | 0.59 | 44.0 | 4.26e-01 | 78.6% | 75.8% |
| 1qwdB00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.58 | 43.0 | 3.79e-01 | 76.1% | 89.2% |
| 3ttgA00 | 3.30.1360.120 | Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › Probable tRNA modification gtpase trme; domain 1 | 0.56 | 45.0 | 3.31e-01 | 92.3% | 30.3% |
| 6fh1B01 | 3.30.590.10 | Alpha Beta › 2-Layer Sandwich › Creatine Kinase; Chain A, domain 2 › Glutamine synthetase/guanido kinase, catalytic domain | 0.56 | 49.0 | 3.96e-01 | 97.4% | 63.5% |
| 5k9fA00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.56 | 42.0 | 4.40e-01 | 99.1% | 89.3% |
| 2jkgA00 | 3.30.450.30 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Dynein light chain 2a, cytoplasmic | 0.55 | 42.0 | 3.74e-01 | 79.5% | 82.4% |
| 1lf7A00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.55 | 42.0 | 3.75e-01 | 80.3% | 64.0% |
| 4czuA01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.55 | 31.0 | 3.44e-01 | 78.6% | 69.6% |
| 1lgyA00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.52 | 38.0 | 2.98e-01 | 76.9% | 94.3% |
| 4o2zA01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.52 | 36.0 | 3.37e-01 | 71.8% | 82.4% |
| 3v7bA00 | 3.40.1000.10 | Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › Mog1/PsbP, alpha/beta/alpha sandwich | 0.52 | 39.0 | 3.67e-01 | 80.3% | 94.6% |
| 4csdB00 | 2.120.10.70 | Mainly Beta › 6 Propeller › Neuraminidase › Fucose-specific lectin | 0.52 | 38.0 | 2.94e-01 | 76.1% | 97.4% |
| 2acaA00 | 2.40.320.10 | Mainly Beta › Beta Barrel › Hypothetical Protein Pfu-838710-001 › Hypothetical Protein Pfu-838710-001 | 0.51 | 46.0 | 4.05e-01 | 99.1% | 96.0% |
| 3ms6A00 | 3.30.450.30 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Dynein light chain 2a, cytoplasmic | 0.51 | 33.0 | 3.75e-01 | 78.6% | 86.7% |
| 1o8vA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.50 | 36.0 | 3.47e-01 | 73.5% | 91.7% |
| 1p50A02 | 3.30.590.10 | Alpha Beta › 2-Layer Sandwich › Creatine Kinase; Chain A, domain 2 › Glutamine synthetase/guanido kinase, catalytic domain | 0.50 | 43.0 | 3.41e-01 | 95.7% | 90.0% |
| 2fgeA01 | 3.30.830.10 | Alpha Beta › 2-Layer Sandwich › Cytochrome Bc1 Complex; Chain A, domain 1 › Metalloenzyme, LuxS/M16 peptidase-like | 0.50 | 45.0 | 3.53e-01 | 100.0% | 74.1% |
ECOD (42)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5007358 | 331.4.1.0 ↗ | a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 | 0.89 | 84.0 | 8.07e-01 | 99.1% | 93.8% |
| 4928736 | 331.19.1.0 ↗ | a+b two layers › TBP-like › Toxin RnlA N-terminal domains › Toxin RnlA N-terminal domains | 0.84 | 79.0 | 7.40e-01 | 100.0% | 95.0% |
| 5049183 | 331.4.1.0 ↗ | a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 | 0.82 | 71.0 | 7.11e-01 | 100.0% | 90.7% |
| 3655033 | 331.9.1.2 ↗ | a+b two layers › TBP-like › Subdomain of clathrin and coatomer appendage domain › Subdomain of clathrin and coatomer appendage domain › B2-adapt-app_C | 0.77 | 61.0 | 5.83e-01 | 82.1% | 77.6% |
| 2755883 | 331.19.1.1 ↗ | a+b two layers › TBP-like › Toxin RnlA N-terminal domains › Toxin RnlA N-terminal domains › RnlA_toxin | 0.69 | 48.0 | 5.35e-01 | 96.6% | 92.4% |
| 3392728 | 331.9.1.8 ↗ | a+b two layers › TBP-like › Subdomain of clathrin and coatomer appendage domain › Subdomain of clathrin and coatomer appendage domain › AP3B1_C_2 | 0.69 | 53.0 | 5.18e-01 | 81.2% | 77.6% |
| 5071985 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.68 | 55.0 | 4.72e-01 | 85.5% | 55.7% |
| 3169357 | 331.4.1.0 ↗ | a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 | 0.67 | 56.0 | 5.80e-01 | 89.7% | 97.3% |
| 5063295 | 331.16.1.1 ↗ | a+b two layers › TBP-like › TA0095-like › TA0095-like › DUF5611 | 0.66 | 51.0 | 5.52e-01 | 82.1% | 99.0% |
| 4449431 | 331.10.2.1 ↗ | a+b two layers › TBP-like › S-adenosylmethionine decarboxylase-related › Bacterial S-adenosylmethionine decarboxylase › AdoMet_dc | 0.66 | 56.0 | 5.50e-01 | 99.1% | 84.8% |
| 5048999 | 331.9.1.0 ↗ | a+b two layers › TBP-like › Subdomain of clathrin and coatomer appendage domain › Subdomain of clathrin and coatomer appendage domain | 0.66 | 59.0 | 5.57e-01 | 98.3% | 84.3% |
| 5056708 | 331.10.2.1 ↗ | a+b two layers › TBP-like › S-adenosylmethionine decarboxylase-related › Bacterial S-adenosylmethionine decarboxylase › AdoMet_dc | 0.65 | 51.0 | 5.08e-01 | 84.6% | 85.6% |
| 5051699 | 331.10.2.1 ↗ | a+b two layers › TBP-like › S-adenosylmethionine decarboxylase-related › Bacterial S-adenosylmethionine decarboxylase › AdoMet_dc | 0.65 | 54.0 | 5.58e-01 | 99.1% | 96.4% |
| 5042099 | 331.10.2.1 ↗ | a+b two layers › TBP-like › S-adenosylmethionine decarboxylase-related › Bacterial S-adenosylmethionine decarboxylase › AdoMet_dc | 0.65 | 50.0 | 5.05e-01 | 83.8% | 85.8% |
| 4957957 | 881.1.1.0 ↗ | a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like | 0.64 | 44.0 | 3.77e-01 | 70.9% | 97.9% |
| 3722681 | 331.3.1.30 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › DUF3074 | 0.63 | 54.0 | 4.03e-01 | 94.0% | 73.1% |
| 7054 | 881.2.1.1 ↗ | a+b three layers › Mog1p/PsbP-like › TM1622-like › TM1622-like › DUF3242 | 0.63 | 45.0 | 4.45e-01 | 74.4% | 100.0% |
| 3817626 | 881.1.1.1 ↗ | a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like › PsbP | 0.63 | 46.0 | 4.02e-01 | 76.1% | 86.1% |
| 5066585 | 881.2.1.0 ↗ | a+b three layers › Mog1p/PsbP-like › TM1622-like › TM1622-like | 0.63 | 43.0 | 4.21e-01 | 70.9% | 100.0% |
| 4004064 | 331.3.1.0 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like | 0.62 | 54.0 | 5.20e-01 | 95.7% | 83.7% |
| 3284774 | 321.1.1.11 ↗ | a+b two layers › Glutamine synthetase-like › Glutamine synthetase/guanido kinase › Glutamine synthetase/guanido kinase › DUF2126 | 0.61 | 48.0 | 3.37e-01 | 84.6% | 68.7% |
| 1066273 | 331.3.1.12 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › STK_08120-like | 0.59 | 52.0 | 5.01e-01 | 96.6% | 90.4% |
| 3487835 | 309.1.1.0 ↗ | a+b two layers › LuxS, MPP, ThrRS/AlaRS common domain › LuxS, MPP, ThrRS/AlaRS common domain › LuxS/MPP-like metallohydrolase | 0.59 | 52.0 | 3.07e-01 | 99.1% | 81.0% |
| 3484746 | 304.107.1.10 ↗ | a+b two layers › Alpha-beta plaits › Aminomethyltransferase folate-binding domain › Aminomethyltransferase folate-binding domain › BBS7_pf | 0.59 | 50.0 | 5.14e-01 | 99.1% | 99.1% |
| 3552754 | 304.163.1.1 ↗ | a+b two layers › Alpha-beta plaits › ATP-binding protein TM_1403 insertion domain › ATP-binding protein TM_1403 insertion domain › R1_ABCA1 | 0.58 | 38.0 | 4.37e-01 | 99.1% | 96.2% |
| 3323226 | 881.1.1.0 ↗ | a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like | 0.58 | 43.0 | 4.03e-01 | 79.5% | 66.0% |
| 3285290 | 881.1.1.0 ↗ | a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like | 0.56 | 38.0 | 3.66e-01 | 78.6% | 60.7% |
| 4643299 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.55 | 37.0 | 4.16e-01 | 93.2% | 94.1% |
| 3268140 | 309.1.1.16 ↗ | a+b two layers › LuxS, MPP, ThrRS/AlaRS common domain › LuxS, MPP, ThrRS/AlaRS common domain › LuxS/MPP-like metallohydrolase › Peptidase_M16, Peptidase_M16_C, M16C_assoc, PreP_C | 0.55 | 49.0 | 2.88e-01 | 99.1% | 80.5% |
| 3678989 | 309.1.1.16 ↗ | a+b two layers › LuxS, MPP, ThrRS/AlaRS common domain › LuxS, MPP, ThrRS/AlaRS common domain › LuxS/MPP-like metallohydrolase › Peptidase_M16, Peptidase_M16_C, M16C_assoc, PreP_C | 0.54 | 46.0 | 2.72e-01 | 94.0% | 31.7% |
| 4505397 | 5087.1.1.0 ↗ | beta meanders › Lipovitellin-phosvitin complex › Lipovitellin LV-2 › Lipovitellin LV-2 | 0.54 | 39.0 | 3.09e-01 | 73.5% | 50.4% |
| 3477257 | 5.1.4.148 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WDR93 | 0.54 | 37.0 | 2.38e-01 | 70.9% | 35.9% |
| 4940816 | 881.1.1.0 ↗ | a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like | 0.54 | 35.0 | 3.78e-01 | 79.5% | 80.0% |
| 4679919 | 309.1.1.16 ↗ | a+b two layers › LuxS, MPP, ThrRS/AlaRS common domain › LuxS, MPP, ThrRS/AlaRS common domain › LuxS/MPP-like metallohydrolase › Peptidase_M16, Peptidase_M16_C, M16C_assoc, PreP_C | 0.53 | 45.0 | 2.67e-01 | 94.0% | 30.7% |
| 5016447 | 884.1.1.1 ↗ | a+b two layers › Hypothetical protein YjiA, C-terminal domain › Hypothetical protein YjiA, C-terminal domain › Hypothetical protein YjiA, C-terminal domain › CobW_C | 0.52 | 36.0 | 4.06e-01 | 76.9% | 97.6% |
| 4875999 | 309.1.1.2 ↗ | a+b two layers › LuxS, MPP, ThrRS/AlaRS common domain › LuxS, MPP, ThrRS/AlaRS common domain › LuxS/MPP-like metallohydrolase › Peptidase_M16,Peptidase_M16_C | 0.52 | 45.0 | 3.40e-01 | 96.6% | 67.5% |
| 3414377 | 309.1.1.20 ↗ | a+b two layers › LuxS, MPP, ThrRS/AlaRS common domain › LuxS, MPP, ThrRS/AlaRS common domain › LuxS/MPP-like metallohydrolase › Peptidase_M16_C, M16C_assoc, PreP_C | 0.52 | 45.0 | 2.71e-01 | 100.0% | 20.3% |
| 5052949 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.51 | 39.0 | 3.85e-01 | 79.5% | 75.2% |
| 5035338 | 868.1.1.1 ↗ | a+b complex topology › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › CYTH | 0.51 | 45.0 | 4.03e-01 | 99.1% | 95.9% |
| 4996503 | 868.1.1.1 ↗ | a+b complex topology › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › CYTH | 0.51 | 46.0 | 3.89e-01 | 99.1% | 90.0% |
| 3598295 | 309.1.1.0 ↗ | a+b two layers › LuxS, MPP, ThrRS/AlaRS common domain › LuxS, MPP, ThrRS/AlaRS common domain › LuxS/MPP-like metallohydrolase | 0.51 | 45.0 | 2.66e-01 | 100.0% | 17.7% |
| 4343144 | 5087.3.1.1 ↗ | beta meanders › Lipovitellin-phosvitin complex › Lipovitellin LV-1C › Lipovitellin LV-1C › Vit_open_b-sht | 0.50 | 35.0 | 2.24e-01 | 70.9% | 30.3% |
D2
medium
residues 1-125_193-229
Domain cluster:
representative
CATH (18)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1zr6A03 | 3.40.462.20 | Alpha Beta › 3-Layer(aba) Sandwich › Vanillyl-alcohol Oxidase; Chain A, domain 3 › | 0.67 | 36.0 | 3.35e-01 | 71.0% | 40.9% |
| 2hzmG01 | 3.30.310.180 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › | 0.66 | 46.0 | 5.32e-01 | 77.8% | 100.0% |
| 2jpiA00 | 3.30.310.50 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Alpha-D-phosphohexomutase, C-terminal domain | 0.65 | 39.0 | 4.86e-01 | 71.0% | 100.0% |
| 1p1lA00 | 3.30.70.120 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.63 | 36.0 | 4.46e-01 | 71.6% | 88.2% |
| 6gdxA00 | 3.30.70.120 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.63 | 37.0 | 4.52e-01 | 74.7% | 88.8% |
| 1mhmA00 | 3.60.90.10 | Alpha Beta › 4-Layer Sandwich › S-adenosylmethionine decarboxylase › S-adenosylmethionine decarboxylase | 0.59 | 49.0 | 4.21e-01 | 88.3% | 98.0% |
| 4rx6D00 | 3.30.70.120 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.58 | 34.0 | 4.17e-01 | 72.2% | 87.9% |
| 1jssA00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.58 | 41.0 | 3.89e-01 | 72.8% | 99.0% |
| 3ttgA00 | 3.30.1360.120 | Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › Probable tRNA modification gtpase trme; domain 1 | 0.58 | 44.0 | 3.46e-01 | 79.6% | 47.8% |
| 3fo5B00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.58 | 42.0 | 3.68e-01 | 74.1% | 88.8% |
| 2r0cA02 | 3.30.9.10 | Alpha Beta › 2-Layer Sandwich › D-Amino Acid Oxidase; Chain A, domain 2 › D-Amino Acid Oxidase, subunit A, domain 2 | 0.57 | 39.0 | 4.24e-01 | 87.0% | 81.2% |
| 1gjwA02 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.56 | 25.0 | 3.73e-01 | 88.3% | 98.5% |
| 2cj9A01 | 3.30.70.1920 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.56 | 40.0 | 4.23e-01 | 72.8% | 92.1% |
| 1kskA02 | 3.30.2350.10 | Alpha Beta › 2-Layer Sandwich › Pseudouridine synthase › Pseudouridine synthase | 0.55 | 36.0 | 3.60e-01 | 72.2% | 63.5% |
| 4btfA03 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.52 | 35.0 | 4.09e-01 | 74.1% | 97.3% |
| 3m07A04 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.52 | 22.0 | 3.00e-01 | 91.4% | 78.6% |
| 1yemB00 | 2.40.320.10 | Mainly Beta › Beta Barrel › Hypothetical Protein Pfu-838710-001 › Hypothetical Protein Pfu-838710-001 | 0.51 | 38.0 | 3.82e-01 | 77.8% | 100.0% |
| 4nwbA01 | 3.30.70.1730 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein L10, N-terminal RNA-binding domain | 0.50 | 38.0 | 4.22e-01 | 87.7% | 97.0% |
ECOD (20)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4950203 | 331.4.1.35 ↗ | a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 › PF27341 | 0.93 | 88.0 | 7.52e-01 | 97.5% | 97.0% |
| 5007357 | 3435.1.1.10 ↗ | a+b two layers › Recombination-associated protein rdgC › Recombination-associated protein rdgC › Recombination-associated protein rdgC › PF27341 | 0.92 | 81.0 | 7.07e-01 | 90.1% | 96.4% |
| 4938262 | 3435.1.1.10 ↗ | a+b two layers › Recombination-associated protein rdgC › Recombination-associated protein rdgC › Recombination-associated protein rdgC › PF27341 | 0.91 | 82.0 | 7.12e-01 | 92.0% | 97.8% |
| 3701279 | 304.107.1.10 ↗ | a+b two layers › Alpha-beta plaits › Aminomethyltransferase folate-binding domain › Aminomethyltransferase folate-binding domain › BBS7_pf | 0.72 | 43.0 | 5.50e-01 | 70.4% | 100.0% |
| 3762104 | 331.18.1.11 ↗ | a+b two layers › TBP-like › C-terminal TBP-like domain of Roc › C-terminal TBP-like domain of Roc › PF28312 | 0.71 | 44.0 | 5.49e-01 | 95.1% | 100.0% |
| 3512817 | 304.107.1.10 ↗ | a+b two layers › Alpha-beta plaits › Aminomethyltransferase folate-binding domain › Aminomethyltransferase folate-binding domain › BBS7_pf | 0.69 | 45.0 | 5.09e-01 | 93.2% | 84.8% |
| 3554891 | 304.4.1.77 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › PF28312 | 0.69 | 45.0 | 5.38e-01 | 95.7% | 100.0% |
| 3953024 | 304.4.1.0 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel | 0.67 | 43.0 | 5.04e-01 | 72.8% | 90.4% |
| 3510568 | 331.1.1.1 ↗ | a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like › TBP | 0.66 | 38.0 | 4.74e-01 | 70.4% | 95.8% |
| 4629521 | 304.5.1.3 ↗ | a+b two layers › Alpha-beta plaits › GlnB-like › GlnB-like › CutA1 | 0.63 | 36.0 | 4.43e-01 | 72.2% | 87.5% |
| 3733617 | 3435.1.1.0 ↗ | a+b two layers › Recombination-associated protein rdgC › Recombination-associated protein rdgC › Recombination-associated protein rdgC | 0.63 | 48.0 | 3.94e-01 | 79.0% | 98.6% |
| 3703071 | 244.1.1.0 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD-linked reductases-C › FAD-linked reductases-C | 0.61 | 33.0 | 4.35e-01 | 72.2% | 98.8% |
| 5048999 | 331.9.1.0 ↗ | a+b two layers › TBP-like › Subdomain of clathrin and coatomer appendage domain › Subdomain of clathrin and coatomer appendage domain | 0.61 | 48.0 | 5.09e-01 | 99.4% | 95.0% |
| 3798057 | 304.18.1.0 ↗ | a+b two layers › Alpha-beta plaits › Anticodon-binding domain of PheRS › Anticodon-binding domain of PheRS | 0.60 | 39.0 | 4.67e-01 | 70.4% | 96.4% |
| 3077668 | 304.17.1.1 ↗ | a+b two layers › Alpha-beta plaits › N-utilization substance G protein NusG, N-terminal domain › N-utilization substance G protein NusG, N-terminal domain › NusG | 0.60 | 37.0 | 4.42e-01 | 75.9% | 90.8% |
| 5047469 | 331.10.2.0 ↗ | a+b two layers › TBP-like › S-adenosylmethionine decarboxylase-related › Bacterial S-adenosylmethionine decarboxylase | 0.58 | 43.0 | 4.74e-01 | 75.3% | 98.5% |
| 3167766 | 331.1.1.1 ↗ | a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like › TBP | 0.58 | 44.0 | 3.86e-01 | 77.8% | 90.6% |
| 3575626 | 331.9.1.0 ↗ | a+b two layers › TBP-like › Subdomain of clathrin and coatomer appendage domain › Subdomain of clathrin and coatomer appendage domain | 0.56 | 41.0 | 4.14e-01 | 74.1% | 98.1% |
| 5000990 | 241.1.1.0 ↗ | a+b two layers › Type III secretory system chaperone-like › Type III secretory system chaperone › Type III secretory system chaperone | 0.51 | 33.0 | 3.39e-01 | 71.6% | 66.5% |
| 2552765 | 244.1.1.0 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD-linked reductases-C › FAD-linked reductases-C | 0.51 | 33.0 | 3.99e-01 | 72.8% | 99.1% |
D3
medium
residues 126-192
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF27341.1 best | AF_0896_M | 50.5 | 2.80e-13 | 97.0% | 75.3% |
CATH (10)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 6rzqA04 | 3.90.640.10 | Alpha Beta › Alpha-Beta Complex › Actin; Chain A, domain 4 › ATPase, substrate binding domain, subdomain 4 | 0.56 | 33.0 | 3.12e-01 | 82.1% | 45.9% |
| 2dhjA00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.54 | 36.0 | 2.94e-01 | 95.5% | 36.8% |
| 2xqyA01 | 3.30.500.50 | Alpha Beta › 2-Layer Sandwich › Murine Class I Major Histocompatibility Complex, H2-DB; Chain A, domain 1 › | 0.54 | 40.0 | 2.97e-01 | 88.1% | 29.8% |
| 3zoqC00 | 6.20.250.30 | Special › Other non-globular › Double Stranded RNA Binding Domain › | 0.53 | 35.0 | 3.78e-01 | 74.6% | 84.9% |
| 4gniA04 | 3.90.640.10 | Alpha Beta › Alpha-Beta Complex › Actin; Chain A, domain 4 › ATPase, substrate binding domain, subdomain 4 | 0.53 | 31.0 | 2.94e-01 | 82.1% | 43.0% |
| 5w7zA01 | 3.10.150.10 | Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 | 0.52 | 38.0 | 3.17e-01 | 76.1% | 92.0% |
| 4p04A01 | 2.60.40.3100 | Mainly Beta › Sandwich › Immunoglobulin-like › Arylsulphate sulphotransferase monomer, N-terminal domain | 0.51 | 42.0 | 3.66e-01 | 92.5% | 69.8% |
| 2wadA04 | 3.40.710.10 | Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily | 0.51 | 38.0 | 2.47e-01 | 89.6% | 16.3% |
| 3jb4C00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.50 | 43.0 | 3.01e-01 | 100.0% | 63.1% |
| 1jh6A00 | 3.90.1140.10 | Alpha Beta › Alpha-Beta Complex › Cyclic Phosphodiesterase; Chain: A, › Cyclic phosphodiesterase | 0.50 | 36.0 | 2.68e-01 | 76.1% | 86.2% |
ECOD (9)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4950203 | 331.4.1.35 ↗ | a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 › PF27341 | 0.99 | 96.0 | 6.21e-01 | 100.0% | 28.5% |
| 5007357 | 3435.1.1.10 ↗ | a+b two layers › Recombination-associated protein rdgC › Recombination-associated protein rdgC › Recombination-associated protein rdgC › PF27341 | 0.96 | 92.0 | 6.09e-01 | 100.0% | 30.2% |
| None | — | 0.65 | 46.0 | 2.78e-01 | 74.6% | 43.3% | |
| 5056757 | 227.1.1.1 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N | 0.56 | 41.0 | 3.36e-01 | 77.6% | 85.6% |
| 161941 | 220.1.1.1 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH | 0.54 | 36.0 | 2.94e-01 | 95.5% | 36.8% |
| 3268976 | 868.1.1.0 ↗ | a+b complex topology › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related | 0.53 | 43.0 | 3.19e-01 | 91.0% | 93.6% |
| 3764448 | 887.1.1.4 ↗ | a+b two layers › Ribosomal protein L30p/L7e › Ribosomal protein L30p/L7e › Ribosomal protein L30p/L7e › Ribosomal_L30_N | 0.53 | 36.0 | 2.59e-01 | 73.1% | 22.9% |
| 3582833 | 221.1.1.6 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › RA | 0.52 | 44.0 | 3.83e-01 | 100.0% | 87.3% |
| 3789409 | 837.1.1.1 ↗ | a+b two layers › Ribosomal protein S16 › Ribosomal protein S16 › Ribosomal protein S16 › Ribosomal_S16 | 0.51 | 30.0 | 2.64e-01 | 73.1% | 36.9% |