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MW353168.1__QRI43979.1__X__00029
Bact-VirMW353168.1__QRI43979.1__X__00029
Identity
- Accession:
- MW353168 ↗
- Kingdom:
- phage
Quality
47.5
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 29-142
Domain cluster:
representative
CATH (32)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4s3nA01 | 3.30.460.10 | Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › Beta Polymerase, domain 2 | 0.67 | 62.0 | 5.63e-01 | 99.1% | 83.0% |
| 4o8sA01 | 3.10.450.620 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › JHP933, nucleotidyltransferase-like core domain | 0.65 | 57.0 | 5.58e-01 | 100.0% | 85.6% |
| 1t4lB00 | 3.30.160.20 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.61 | 32.0 | 3.60e-01 | 90.4% | 63.3% |
| 4dm5A00 | 3.30.1450.10 | Alpha Beta › 2-Layer Sandwich › Beta-lactamase Inhibitory Protein; Chain:B, domain 1 › | 0.59 | 35.0 | 3.92e-01 | 100.0% | 77.0% |
| 1t0pB00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.57 | 41.0 | 4.67e-01 | 100.0% | 100.0% |
| 1whqA01 | 3.30.160.20 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.57 | 28.0 | 3.36e-01 | 88.6% | 70.4% |
| 7jrmA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.56 | 36.0 | 4.18e-01 | 94.7% | 98.6% |
| 2xwxA03 | 2.60.40.2550 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.55 | 44.0 | 4.77e-01 | 98.2% | 100.0% |
| 3mcrA00 | 3.30.460.80 | Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › NADH:ubiquinone oxidoreductase Nqo5 subunit | 0.55 | 47.0 | 4.24e-01 | 100.0% | 68.8% |
| 2rs7A01 | 3.30.160.20 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.54 | 28.0 | 3.40e-01 | 88.6% | 75.7% |
| 4ofyD02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.53 | 46.0 | 4.73e-01 | 99.1% | 99.1% |
| 3pddA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.53 | 41.0 | 4.32e-01 | 100.0% | 93.1% |
| 5c71A02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.53 | 42.0 | 4.56e-01 | 98.2% | 100.0% |
| 4e5xG00 | 2.60.40.3530 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.53 | 37.0 | 3.97e-01 | 99.1% | 84.8% |
| 2e7cA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.52 | 41.0 | 4.34e-01 | 98.2% | 95.0% |
| 4bsjA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.52 | 38.0 | 4.24e-01 | 97.4% | 97.8% |
| 5k6xA04 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.52 | 40.0 | 4.39e-01 | 97.4% | 100.0% |
| 1lxmA04 | 2.60.40.1380 | Mainly Beta › Sandwich › Immunoglobulin-like › E set domains; domain 4 | 0.52 | 32.0 | 3.71e-01 | 92.1% | 90.8% |
| 2nvmA00 | 3.30.310.110 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › XisI-like | 0.52 | 42.0 | 4.37e-01 | 86.8% | 100.0% |
| 4u7mA03 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.52 | 39.0 | 4.26e-01 | 97.4% | 95.7% |
| 1gzhA00 | 2.60.40.720 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.52 | 47.0 | 3.99e-01 | 100.0% | 90.9% |
| 5oyjC01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.51 | 40.0 | 4.31e-01 | 99.1% | 97.9% |
| 2zuxA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.51 | 36.0 | 4.02e-01 | 93.9% | 95.5% |
| 6bxuA02 | 2.60.40.60 | Mainly Beta › Sandwich › Immunoglobulin-like › Cadherins | 0.51 | 40.0 | 4.29e-01 | 96.5% | 100.0% |
| 4fomA03 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.51 | 38.0 | 4.18e-01 | 98.2% | 97.8% |
| 3tp4B02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.51 | 39.0 | 4.30e-01 | 99.1% | 100.0% |
| 3fn9C04 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.51 | 37.0 | 4.04e-01 | 94.7% | 93.5% |
| 2r15A02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.51 | 39.0 | 4.23e-01 | 97.4% | 97.9% |
| 4u7mA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.51 | 39.0 | 4.25e-01 | 98.2% | 98.9% |
| 5o5iA00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.51 | 38.0 | 4.18e-01 | 98.2% | 100.0% |
| 5fm5P00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.50 | 40.0 | 4.27e-01 | 99.1% | 99.0% |
| 4oocA00 | 3.10.129.110 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Polyketide synthase dehydratase | 0.50 | 37.0 | 2.85e-01 | 99.1% | 32.8% |
ECOD (40)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3721174 | 719.1.1.0 ↗ | beta barrels › XRCC4, N-terminal domain-like › XRCC4, N-terminal domain › XRCC4, N-terminal domain | 0.68 | 41.0 | 3.82e-01 | 100.0% | 49.3% |
| 3435911 | 330.1.1.1 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm | 0.68 | 32.0 | 3.29e-01 | 87.7% | 45.5% |
| 3988803 | 6082.1.1.0 ↗ | beta sandwiches › N-terminal domain of BT_2081-like › N-terminal domain of BT_2081-like › N-terminal domain of BT_2081-like | 0.66 | 45.0 | 5.23e-01 | 96.5% | 100.0% |
| 3814983 | 2484.1.1.67 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RVT_3 | 0.65 | 29.0 | 3.55e-01 | 77.2% | 62.7% |
| 3420092 | 330.1.1.1 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm | 0.65 | 32.0 | 3.68e-01 | 90.4% | 63.7% |
| 3456692 | 386.1.1.4 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-BED | 0.64 | 25.0 | 3.46e-01 | 88.6% | 69.5% |
| 3598422 | 222.1.1.0 ↗ | a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase | 0.63 | 36.0 | 3.83e-01 | 97.4% | 63.0% |
| 3868413 | 316.1.1.20 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › OAS1_C | 0.63 | 58.0 | 4.93e-01 | 100.0% | 75.6% |
| 5081356 | 316.1.1.18 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › AbiEii | 0.62 | 56.0 | 4.35e-01 | 100.0% | 46.3% |
| 3675781 | 11.1.1.38 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Big_2 | 0.62 | 44.0 | 5.04e-01 | 98.2% | 100.0% |
| 3818519 | 11.1.1.38 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Big_2 | 0.61 | 44.0 | 4.99e-01 | 98.2% | 100.0% |
| None | — | 0.61 | 55.0 | 4.59e-01 | 100.0% | 65.1% | |
| 3939687 | 220.1.1.2 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › WH1 | 0.60 | 30.0 | 3.24e-01 | 93.0% | 55.0% |
| 4026007 | 330.1.1.0 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like | 0.60 | 33.0 | 3.78e-01 | 91.2% | 72.5% |
| 5047623 | 244.2.1.0 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD/NAD-linked reduatases, dimerisation (C-terminal) domain › FAD/NAD-linked reduatases, dimerisation (C-terminal) domain | 0.59 | 34.0 | 3.83e-01 | 97.4% | 74.1% |
| 3530658 | 319.1.1.1 ↗ | beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › HSP20 | 0.59 | 37.0 | 3.74e-01 | 100.0% | 61.7% |
| 3661102 | 211.1.1.0 ↗ | a+b two layers › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase | 0.59 | 28.0 | 3.79e-01 | 87.7% | 90.9% |
| 5027904 | 244.4.1.0 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › Ni-Fe binding domain in nickel-iron hydrogenase large subunit › Ni-Fe binding domain in nickel-iron hydrogenase large subunit | 0.59 | 35.0 | 4.00e-01 | 89.5% | 82.5% |
| 4960716 | 244.4.1.1 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › Ni-Fe binding domain in nickel-iron hydrogenase large subunit › Ni-Fe binding domain in nickel-iron hydrogenase large subunit › Complex1_49kDa | 0.58 | 35.0 | 3.99e-01 | 91.2% | 81.2% |
| 3928536 | 211.1.1.0 ↗ | a+b two layers › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase | 0.57 | 39.0 | 4.51e-01 | 97.4% | 98.8% |
| 3625346 | 11.1.1.588 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Fibulin_C | 0.57 | 47.0 | 4.55e-01 | 86.8% | 96.0% |
| 3378706 | 211.1.1.0 ↗ | a+b two layers › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase | 0.57 | 29.0 | 3.30e-01 | 74.6% | 65.0% |
| 5053359 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.57 | 29.0 | 3.51e-01 | 72.8% | 72.5% |
| 4937869 | 3414.1.1.0 ↗ | beta sandwiches › A putative surface protein › A putative surface protein › A putative surface protein | 0.55 | 37.0 | 4.15e-01 | 76.3% | 91.8% |
| 4930177 | 11.1.1.1443 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › PF29994 | 0.55 | 45.0 | 4.37e-01 | 100.0% | 80.8% |
| 5033073 | 3414.1.1.13 ↗ | beta sandwiches › A putative surface protein › A putative surface protein › A putative surface protein › PF29994 | 0.55 | 42.0 | 4.49e-01 | 98.2% | 97.9% |
| 5060884 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.55 | 50.0 | 5.01e-01 | 98.2% | 98.3% |
| 4026006 | 330.1.1.0 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like | 0.55 | 29.0 | 3.40e-01 | 86.0% | 72.5% |
| 4975017 | 11.1.1.130 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Inhibitor_I42 | 0.54 | 44.0 | 4.61e-01 | 86.0% | 100.0% |
| 3928714 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.53 | 42.0 | 4.54e-01 | 93.9% | 100.0% |
| None | — | 0.53 | 39.0 | 3.99e-01 | 76.3% | 98.2% | |
| 4977225 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.53 | 43.0 | 4.59e-01 | 100.0% | 100.0% |
| 4954960 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.53 | 43.0 | 4.37e-01 | 97.4% | 90.0% |
| 4606701 | 7556.1.1.1 ↗ | a/b three-layered sandwiches › Fe-only hydrogenase › Fe-only hydrogenase › Fe-only hydrogenase › Fe_hyd_lg_C | 0.52 | 41.0 | 2.98e-01 | 86.0% | 63.4% |
| 4027964 | 7579.1.1.42 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › Hydrolase_4 | 0.52 | 41.0 | 2.97e-01 | 85.1% | 48.8% |
| 3697816 | 2008.1.1.99 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › PDDEXK_12 | 0.51 | 36.0 | 3.12e-01 | 72.8% | 75.0% |
| 1397 | 11.1.1.319 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › HL_N-beta | 0.51 | 32.0 | 3.66e-01 | 93.0% | 89.7% |
| 3898606 | 11.1.1.217 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Izumo-Ig | 0.50 | 40.0 | 4.32e-01 | 94.7% | 100.0% |
| 4344873 | 2004.1.1.361 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › UTP25_NTPase-like | 0.50 | 41.0 | 2.96e-01 | 93.0% | 91.9% |
| 3903604 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.50 | 41.0 | 4.11e-01 | 98.2% | 85.0% |
D2
high
residues 147-296
D3
high
residues 701-819
D4
medium
residues 302-361
D5
medium
residues 535-581
D6
medium
residues 617-697
D7
medium
residues 820-887
D8
medium
residues 888-980
D9
medium
residues 981-1076
D10
medium
residues 1381-1442