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MW353171.1__QRI44074.1__X__00024
Bact-VirMW353171.1__QRI44074.1__X__00024
Identity
- Accession:
- MW353171 ↗
- Kingdom:
- phage
Quality
95.1
mean pLDDT
Cluster
View cluster (5 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 13-75_230-277
Domain cluster:
representative
D2
high
residues 79-223
Domain cluster:
rep: putative_lambda-type_exonuclease__YP_003969838__Cafeteria_roenbergensis_virus_BV-PW1__693272__D160-284_343-395
CATH (14)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3sm4A00 | 3.90.320.10 | Alpha Beta › Alpha-Beta Complex › Lambda Exonuclease; Chain A › | 0.83 | 67.0 | 5.67e-01 | 100.0% | 53.8% |
| 3k93A00 | 3.90.320.10 | Alpha Beta › Alpha-Beta Complex › Lambda Exonuclease; Chain A › | 0.75 | 70.0 | 5.93e-01 | 100.0% | 64.1% |
| 1ob8A00 | 3.40.1350.10 | Alpha Beta › 3-Layer(aba) Sandwich › Trna Endonuclease; Chain: A, domain 1 › | 0.73 | 47.0 | 5.18e-01 | 93.8% | 79.0% |
| 2xi5A00 | 3.40.91.60 | Alpha Beta › 3-Layer(aba) Sandwich › Restriction Endonuclease › | 0.64 | 49.0 | 4.57e-01 | 96.6% | 63.6% |
| 3h4rA00 | 3.90.320.10 | Alpha Beta › Alpha-Beta Complex › Lambda Exonuclease; Chain A › | 0.62 | 58.0 | 5.01e-01 | 100.0% | 71.2% |
| 7n7zA01 | 3.40.47.10 | Alpha Beta › 3-Layer(aba) Sandwich › Peroxisomal Thiolase; Chain A, domain 1 › Thiolase/Chalcone synthase | 0.59 | 34.0 | 3.53e-01 | 97.2% | 59.1% |
| 2qb7B02 | 3.10.310.20 | Alpha Beta › Roll › Diaminopimelate Epimerase; Chain A, domain 1 › DHHA2 domain | 0.59 | 35.0 | 3.61e-01 | 96.6% | 60.7% |
| 4cgsA00 | 3.40.91.90 | Alpha Beta › 3-Layer(aba) Sandwich › Restriction Endonuclease › Influenza RNA-dependent RNA polymerase subunit PA, endonuclease domain | 0.57 | 46.0 | 4.35e-01 | 91.7% | 72.0% |
| 3gwaA01 | 3.40.47.10 | Alpha Beta › 3-Layer(aba) Sandwich › Peroxisomal Thiolase; Chain A, domain 1 › Thiolase/Chalcone synthase | 0.56 | 37.0 | 3.45e-01 | 97.9% | 54.5% |
| 2x3eA01 | 3.40.47.10 | Alpha Beta › 3-Layer(aba) Sandwich › Peroxisomal Thiolase; Chain A, domain 1 › Thiolase/Chalcone synthase | 0.56 | 36.0 | 3.42e-01 | 97.9% | 54.4% |
| 4v2pA01 | 3.40.47.10 | Alpha Beta › 3-Layer(aba) Sandwich › Peroxisomal Thiolase; Chain A, domain 1 › Thiolase/Chalcone synthase | 0.55 | 35.0 | 3.37e-01 | 97.9% | 54.3% |
| 4g6uA02 | 3.40.1350.110 | Alpha Beta › 3-Layer(aba) Sandwich › Trna Endonuclease; Chain: A, domain 1 › | 0.54 | 41.0 | 4.26e-01 | 91.7% | 83.3% |
| 3h76A01 | 3.40.47.10 | Alpha Beta › 3-Layer(aba) Sandwich › Peroxisomal Thiolase; Chain A, domain 1 › Thiolase/Chalcone synthase | 0.54 | 36.0 | 3.38e-01 | 97.9% | 55.2% |
| 1u0mA01 | 3.40.47.10 | Alpha Beta › 3-Layer(aba) Sandwich › Peroxisomal Thiolase; Chain A, domain 1 › Thiolase/Chalcone synthase | 0.52 | 35.0 | 3.18e-01 | 96.6% | 48.5% |
ECOD (21)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4559667 | 2008.1.1.50 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › YqaJ | 0.86 | 82.0 | 6.41e-01 | 100.0% | 62.9% |
| 136966 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.75 | 70.0 | 5.93e-01 | 100.0% | 64.1% |
| 3988470 | 2008.1.1.51 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › McrBC | 0.74 | 55.0 | 5.39e-01 | 97.9% | 71.0% |
| 4459358 | 2008.1.1.6 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › UPF0102 | 0.71 | 56.0 | 6.08e-01 | 97.9% | 98.3% |
| 4375784 | 2008.1.1.6 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › UPF0102 | 0.69 | 49.0 | 5.64e-01 | 91.7% | 100.0% |
| 3005282 | 2008.2.1.1 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › tRNA-intron endonuclease catalytic domain-like › tRNA-intron endonuclease catalytic domain-like › tRNA_int_endo | 0.68 | 54.0 | 5.75e-01 | 96.6% | 95.2% |
| 3884920 | 2008.2.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › tRNA-intron endonuclease catalytic domain-like › tRNA-intron endonuclease catalytic domain-like | 0.68 | 53.0 | 5.18e-01 | 96.6% | 74.4% |
| 402316 | 2008.1.1.65 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › L_protein_N | 0.64 | 49.0 | 4.57e-01 | 96.6% | 64.5% |
| None | — | 0.62 | 58.0 | 4.67e-01 | 100.0% | 61.1% | |
| 3223694 | 2008.1.1.94 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › DUF5614 | 0.61 | 46.0 | 4.31e-01 | 97.2% | 65.1% |
| 3382399 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.60 | 55.0 | 4.66e-01 | 97.2% | 76.0% |
| 4046364 | 7503.1.1.7 ↗ | a/b three-layered sandwiches › TolB, N-terminal domain › TolB, N-terminal domain › TolB, N-terminal domain › LpoB | 0.60 | 38.0 | 3.95e-01 | 98.6% | 65.9% |
| 1144868 | 2008.1.1.66 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › ArenaCapSnatch | 0.57 | 46.0 | 4.37e-01 | 85.5% | 73.4% |
| 5072969 | 7581.1.1.13 ↗ | a/b three-layered sandwiches › Thiolase-like › Thiolase-like › Thiolase-like › ACP_syn_III | 0.56 | 35.0 | 3.55e-01 | 96.6% | 62.9% |
| 1155793 | 5104.1.1.3 ↗ | a+b three layers › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › DHHA2 | 0.56 | 35.0 | 3.53e-01 | 96.6% | 61.8% |
| 149365 | 7581.1.1.13 ↗ | a/b three-layered sandwiches › Thiolase-like › Thiolase-like › Thiolase-like › ACP_syn_III | 0.55 | 37.0 | 3.39e-01 | 97.9% | 52.2% |
| 4935707 | 7581.1.1.0 ↗ | a/b three-layered sandwiches › Thiolase-like › Thiolase-like › Thiolase-like | 0.55 | 34.0 | 3.29e-01 | 96.6% | 53.3% |
| 3289716 | 213.1.1.1 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_1 | 0.52 | 46.0 | 4.09e-01 | 97.9% | 93.8% |
| 3407460 | 328.12.1.1 ↗ | a+b two layers › IF3-like › IF3-like domain in Nudix hydrolase › IF3-like domain in Nudix hydrolase › Nudix_hydro | 0.51 | 33.0 | 3.88e-01 | 81.4% | 93.0% |
| 5022187 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.51 | 42.0 | 4.17e-01 | 93.1% | 83.9% |
| 3258001 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.50 | 40.0 | 4.14e-01 | 89.0% | 88.6% |