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MW354678.1__QRI44503.1__X__00037

Bact-Vir

MW354678.1__QRI44503.1__X__00037

Identity

Accession:
MW354678 ↗
Kingdom:
phage

Quality

87.9 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 2-261
PDB
CATH (58)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1jcmP00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.75 59.0 5.93e-01 99.6% 80.3%
2pgwA02 3.20.20.120 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Enolase-like C-terminal domain 0.75 60.0 6.45e-01 100.0% 96.8%
2oz8A02 3.20.20.120 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Enolase-like C-terminal domain 0.74 57.0 6.07e-01 100.0% 89.7%
6bmaA00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.74 57.0 5.80e-01 98.5% 79.9%
1jpdX02 3.20.20.120 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Enolase-like C-terminal domain 0.73 56.0 6.15e-01 100.0% 97.6%
1l6wA00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.73 55.0 5.93e-01 85.4% 90.5%
1sfjB00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.72 61.0 6.39e-01 100.0% 97.4%
1tkkA02 3.20.20.120 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Enolase-like C-terminal domain 0.72 58.0 6.02e-01 100.0% 89.3%
5c54G00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.71 66.0 6.18e-01 97.7% 99.0%
3eegB00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.70 62.0 6.11e-01 100.0% 87.9%
3n2xA00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.69 64.0 6.13e-01 97.7% 97.7%
4ur7A00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.69 63.0 6.02e-01 96.5% 95.0%
4jgiB02 3.40.50.280 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Cobalamin-binding domain 0.69 28.0 3.99e-01 78.1% 76.2%
3h5dA00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.69 64.0 6.08e-01 96.9% 95.0%
6ei9A01 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.69 55.0 5.91e-01 100.0% 95.1%
6ktqA01 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.69 62.0 6.09e-01 100.0% 87.5%
4xkyA00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.69 64.0 6.10e-01 97.7% 98.0%
3s5nA00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.69 64.0 6.13e-01 97.7% 97.6%
1jqxA01 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.69 59.0 5.89e-01 100.0% 87.3%
4n4pD00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.68 63.0 6.10e-01 97.3% 97.9%
2hmcA00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.68 63.0 5.89e-01 97.7% 94.9%
3tfxA00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.68 56.0 5.93e-01 100.0% 96.1%
2r8wA00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.68 63.0 5.99e-01 97.7% 97.3%
7o0eA01 3.20.20.80 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases 0.68 64.0 5.71e-01 100.0% 94.1%
5uckB00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.67 64.0 6.13e-01 100.0% 92.1%
3tp4B01 3.20.20.80 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases 0.67 63.0 5.55e-01 100.0% 86.5%
2wmfA01 3.20.20.80 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases 0.66 60.0 5.49e-01 97.3% 96.2%
2pcqA00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.66 61.0 5.99e-01 98.1% 100.0%
3bofA02 3.20.20.20 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Dihydropteroate synthase-like 0.66 57.0 5.78e-01 100.0% 90.8%
1j6oA00 3.20.20.140 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases 0.66 55.0 5.57e-01 100.0% 88.1%
5b7yA00 3.20.20.150 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Divalent-metal-dependent TIM barrel enzymes 0.65 61.0 6.09e-01 100.0% 98.5%
1e9iC02 3.20.20.120 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Enolase-like C-terminal domain 0.65 49.0 4.72e-01 77.7% 91.9%
3aamA00 3.20.20.150 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Divalent-metal-dependent TIM barrel enzymes 0.64 60.0 6.01e-01 100.0% 99.6%
3qyqA00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.64 59.0 5.80e-01 98.8% 91.6%
1ehaA01 3.20.20.80 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases 0.64 60.0 5.30e-01 100.0% 95.0%
4jz5A00 3.20.20.80 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases 0.63 47.0 5.19e-01 88.5% 94.2%
4g9pA01 3.20.20.20 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Dihydropteroate synthase-like 0.63 59.0 5.76e-01 100.0% 90.2%
4gieA00 3.20.20.100 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › NADP-dependent oxidoreductase domain 0.63 55.0 5.29e-01 100.0% 81.9%
3tc3B00 3.20.20.150 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Divalent-metal-dependent TIM barrel enzymes 0.62 58.0 5.64e-01 100.0% 97.9%
2p0oA01 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.62 53.0 5.57e-01 100.0% 99.6%
6fcxA01 3.20.20.220 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › 0.61 58.0 5.64e-01 100.0% 94.7%
4b15A00 3.20.20.80 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases 0.60 56.0 5.62e-01 100.0% 99.2%
3bc9A02 3.20.20.80 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases 0.60 56.0 5.41e-01 100.0% 96.3%
3bleA00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.59 55.0 5.22e-01 99.2% 98.4%
3ij6A00 3.20.20.140 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases 0.59 51.0 4.84e-01 90.4% 93.4%
7s6eA01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.58 31.0 4.22e-01 77.3% 100.0%
1dcfA00 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.57 29.0 3.90e-01 78.1% 92.5%
3cg4A00 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.56 27.0 3.66e-01 72.7% 87.3%
2qezE03 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.56 52.0 5.00e-01 98.5% 88.4%
3bf0C03 3.90.226.10 Alpha Beta › Alpha-Beta Complex › 2-enoyl-CoA Hydratase; Chain A, domain 1 › 2-enoyl-CoA Hydratase; Chain A, domain 1 0.56 31.0 3.87e-01 71.9% 83.8%
1v1aA00 3.40.1190.20 Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase 0.56 42.0 4.03e-01 76.5% 99.3%
2a5hA02 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.56 49.0 4.74e-01 98.5% 84.6%
5uqiA00 3.40.50.10490 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glucose-6-phosphate isomerase like protein; domain 1 0.56 32.0 3.74e-01 88.8% 76.6%
1jqlB00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.55 31.0 4.06e-01 79.6% 100.0%
5t3oA02 3.40.50.2020 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.54 31.0 3.97e-01 77.3% 100.0%
7toiA01 3.40.50.1110 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › SGNH hydrolase 0.54 39.0 4.25e-01 85.8% 88.4%
6hq7B02 3.20.20.450 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › EAL domain 0.54 47.0 4.72e-01 92.7% 94.2%
2yvaA00 3.40.50.10490 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glucose-6-phosphate isomerase like protein; domain 1 0.53 35.0 3.93e-01 87.3% 86.5%
ECOD (67)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4104975 2002.1.1.73 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › TGT 0.75 72.0 6.27e-01 100.0% 86.5%
4985994 2002.1.1.73 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › TGT 0.75 72.0 6.23e-01 100.0% 84.3%
4940674 2002.1.1.9 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › OMPdecase 0.74 59.0 6.23e-01 100.0% 89.9%
5061803 2002.1.1.66 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › DHquinase_I 0.73 61.0 6.47e-01 100.0% 97.0%
4029440 2002.1.1.73 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › TGT 0.73 69.0 6.06e-01 100.0% 89.4%
3003998 2002.1.1.0 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels 0.72 61.0 6.49e-01 100.0% 100.0%
4997008 2002.1.1.9 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › OMPdecase 0.72 61.0 6.34e-01 100.0% 95.4%
5052161 2002.1.1.29 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › DHDPS 0.71 65.0 5.96e-01 96.9% 95.5%
4980563 2002.1.1.0 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels 0.71 68.0 6.55e-01 100.0% 96.1%
3182687 2002.1.1.29 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › DHDPS 0.70 65.0 6.01e-01 97.7% 95.3%
4328077 2002.1.1.29 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › DHDPS 0.69 63.0 6.01e-01 95.0% 88.5%
1030291 2002.1.1.29 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › DHDPS 0.69 64.0 6.00e-01 96.5% 91.9%
5061577 2002.1.1.29 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › DHDPS 0.69 64.0 5.91e-01 96.5% 90.0%
4403689 2002.1.1.29 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › DHDPS 0.69 64.0 6.09e-01 97.7% 99.3%
4990134 2002.1.1.111 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › HpcH_HpaI 0.69 56.0 5.52e-01 100.0% 80.4%
5073358 2002.1.1.139 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › BKACE 0.68 60.0 5.98e-01 100.0% 89.6%
5042335 2002.1.1.60 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › AP_endonuc_2 0.68 60.0 6.24e-01 100.0% 99.6%
5027543 2002.1.1.79 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › DUF72 0.68 55.0 5.62e-01 100.0% 86.3%
4996921 2002.1.1.29 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › DHDPS 0.67 62.0 6.00e-01 97.7% 98.3%
4377323 2002.1.1.56 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Dus 0.67 60.0 5.02e-01 93.5% 77.8%
4954805 2002.1.1.90 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › MTHFR 0.67 52.0 5.53e-01 88.8% 92.0%
4926841 2002.1.1.25 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › HMGL-like 0.67 61.0 5.85e-01 97.7% 91.7%
3513733 2002.1.1.56 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Dus 0.66 59.0 4.16e-01 93.5% 42.6%
4991064 2002.1.1.25 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › HMGL-like 0.66 62.0 5.32e-01 98.8% 78.7%
5065946 2002.1.1.139 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › BKACE 0.66 62.0 5.81e-01 100.0% 91.6%
8932 2002.1.1.44 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › TatD_DNase 0.66 55.0 5.57e-01 100.0% 88.1%
None 0.65 61.0 5.29e-01 98.8% 77.9%
4397796 2002.1.1.0 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels 0.65 61.0 5.24e-01 98.8% 77.2%
5016101 2002.1.1.25 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › HMGL-like 0.65 61.0 5.24e-01 98.8% 76.7%
5036211 2002.1.1.25 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › HMGL-like 0.65 59.0 5.80e-01 96.2% 99.3%
3967165 2002.1.1.25 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › HMGL-like 0.65 60.0 5.64e-01 98.8% 94.6%
4411670 2002.1.1.0 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels 0.64 60.0 5.23e-01 99.2% 78.7%
5005213 2002.1.1.56 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Dus 0.64 57.0 5.37e-01 95.0% 87.9%
3515945 2002.1.1.152 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Amidohydro_3 0.63 59.0 5.62e-01 100.0% 93.7%
4033370 2002.1.1.217 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM,YfkB 0.63 58.0 5.19e-01 100.0% 90.3%
5082872 2002.1.1.56 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Dus 0.63 56.0 5.45e-01 94.2% 96.5%
4481407 2002.1.1.56 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Dus 0.62 56.0 5.15e-01 95.0% 93.0%
3922918 2002.1.1.56 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Dus 0.62 56.0 5.32e-01 96.2% 84.5%
None 0.62 59.0 5.53e-01 100.0% 89.0%
None 0.62 59.0 5.56e-01 100.0% 89.8%
4142553 2002.1.1.54 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › DHO_dh 0.62 59.0 5.52e-01 100.0% 87.4%
3837969 2002.1.1.56 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Dus 0.62 56.0 5.21e-01 96.2% 93.0%
None 0.62 59.0 5.51e-01 100.0% 87.4%
4973176 2002.1.1.74 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Meth_synt_2 0.62 58.0 5.64e-01 100.0% 97.9%
4321093 2002.1.1.54 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › DHO_dh 0.62 59.0 5.48e-01 100.0% 86.6%
None 0.62 58.0 5.48e-01 100.0% 87.4%
None 0.62 58.0 5.47e-01 100.0% 85.6%
None 0.62 58.0 5.48e-01 100.0% 88.5%
None 0.61 58.0 5.47e-01 100.0% 87.9%
2658619 2002.1.1.30 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Glyco_hydro_18 0.61 57.0 5.41e-01 100.0% 94.2%
4014969 2002.1.1.0 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels 0.60 56.0 5.36e-01 100.0% 94.0%
1030373 2002.1.1.0 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels 0.60 56.0 5.62e-01 100.0% 99.2%
4528721 2002.1.1.56 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Dus 0.60 53.0 4.95e-01 95.0% 86.2%
5033216 2002.1.1.56 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Dus 0.59 48.0 4.80e-01 88.1% 82.7%
3496774 65.1.1.3 beta sandwiches › Composite domain of metallo-dependent hydrolases › Composite domain of metallo-dependent hydrolases › Composite domain of metallo-dependent hydrolases › Amidohydro_1 0.59 55.0 4.52e-01 100.0% 59.6%
4982125 2002.1.1.67 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Pro_dh 0.59 54.0 5.40e-01 98.1% 98.9%
5055755 2002.1.1.120 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM 0.59 53.0 4.83e-01 96.5% 87.6%
4635420 2002.1.1.267 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Enolase_C, MAAL_C 0.56 52.0 4.90e-01 100.0% 87.3%
4983888 2002.1.1.120 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM 0.54 49.0 4.67e-01 99.2% 82.7%
5016586 2007.1.12.2 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Type II 3-dehydroquinate dehydratase › Exonuc_VII_L 0.54 29.0 2.99e-01 80.0% 50.6%
4477251 2007.1.9.5 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › N5-CAIR mutase (phosphoribosylaminoimidazole carboxylase, PurE) › Exonuc_VII_L 0.54 29.0 2.77e-01 80.4% 40.6%
4834102 2002.1.1.120 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM 0.53 40.0 4.44e-01 99.2% 100.0%
4443137 2007.1.2.29 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I › Exonuc_VII_L 0.53 30.0 3.49e-01 88.1% 76.2%
3483696 207.1.1.0 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats 0.51 31.0 3.70e-01 72.7% 88.8%
3705011 2004.1.1.414 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › GTP_EFTU, MMR_HSR1 0.50 38.0 3.63e-01 78.1% 92.1%
4450697 2007.1.12.0 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Type II 3-dehydroquinate dehydratase 0.50 29.0 2.80e-01 89.2% 48.1%
3194628 2003.1.1.53 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › NmrA 0.50 37.0 3.39e-01 73.5% 98.2%