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MW358927.1__QQK88060.1__X__00026
Bact-VirMW358927.1__QQK88060.1__X__00026
Identity
- Accession:
- MW358927 ↗
- Kingdom:
- phage
Quality
70.5
mean pLDDT
Taxonomy
Heunggongvirae›
Uroviricota›
Caudoviricetes›
Pantevenvirales›
Straboviridae›
Gualtarvirus›
Providencia_phage_PSTRCR_127
TaxID: 2800827
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 1-94
Domain cluster:
representative
CATH (43)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3ugvA01 | 3.30.390.10 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain | 0.66 | 37.0 | 3.40e-01 | 97.9% | 42.1% |
| 1tkkA01 | 3.30.390.10 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain | 0.65 | 37.0 | 3.50e-01 | 96.8% | 47.0% |
| 1y8cA02 | 2.20.25.110 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › S-adenosyl-L-methionine-dependent methyltransferases | 0.64 | 32.0 | 3.91e-01 | 85.1% | 75.0% |
| 8fwpB01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.64 | 45.0 | 3.25e-01 | 83.0% | 27.5% |
| 4kh9B02 | 2.60.40.1930 | Mainly Beta › Sandwich › Immunoglobulin-like › Macroglobulin (MG2) domain | 0.63 | 44.0 | 4.19e-01 | 73.4% | 96.5% |
| 7x4nE01 | 3.40.850.10 | Alpha Beta › 3-Layer(aba) Sandwich › Kinesin › Kinesin motor domain | 0.62 | 56.0 | 3.80e-01 | 97.9% | 56.2% |
| 1fguB01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.61 | 37.0 | 3.64e-01 | 94.7% | 54.3% |
| 3dc4A00 | 3.40.850.10 | Alpha Beta › 3-Layer(aba) Sandwich › Kinesin › Kinesin motor domain | 0.61 | 54.0 | 3.80e-01 | 97.9% | 52.9% |
| 3jvaA01 | 3.30.390.10 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain | 0.60 | 36.0 | 3.38e-01 | 97.9% | 47.4% |
| 4inaA02 | 3.30.360.10 | Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 | 0.60 | 44.0 | 3.41e-01 | 75.5% | 97.0% |
| 4gkpB00 | 3.40.850.20 | Alpha Beta › 3-Layer(aba) Sandwich › Kinesin › | 0.60 | 53.0 | 3.85e-01 | 96.8% | 66.9% |
| 6fgjA01 | 3.30.460.10 | Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › Beta Polymerase, domain 2 | 0.59 | 50.0 | 4.36e-01 | 94.7% | 88.0% |
| 1sqiA01 | 3.10.180.10 | Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 | 0.59 | 48.0 | 4.00e-01 | 89.4% | 82.6% |
| 1fx3B00 | 3.10.420.10 | Alpha Beta › Roll › Bacterial Protein-export protein SecB › SecB-like | 0.59 | 40.0 | 3.46e-01 | 77.7% | 44.3% |
| 2o0aA00 | 3.40.850.20 | Alpha Beta › 3-Layer(aba) Sandwich › Kinesin › | 0.58 | 51.0 | 3.66e-01 | 95.7% | 64.7% |
| 1cjxB02 | 3.10.180.10 | Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 | 0.58 | 49.0 | 3.85e-01 | 92.6% | 86.6% |
| 2be3B01 | 3.30.460.10 | Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › Beta Polymerase, domain 2 | 0.58 | 49.0 | 4.39e-01 | 93.6% | 88.1% |
| 7wrgB01 | 3.40.850.10 | Alpha Beta › 3-Layer(aba) Sandwich › Kinesin › Kinesin motor domain | 0.57 | 50.0 | 3.43e-01 | 95.7% | 56.7% |
| 1ss4A00 | 3.10.180.10 | Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 | 0.56 | 49.0 | 4.18e-01 | 94.7% | 85.9% |
| 3ik4B01 | 3.30.390.10 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain | 0.56 | 35.0 | 3.23e-01 | 97.9% | 48.3% |
| 4ys4A02 | 2.60.40.2860 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.56 | 49.0 | 4.41e-01 | 96.8% | 94.6% |
| 6ihjC00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.55 | 44.0 | 3.65e-01 | 85.1% | 76.8% |
| 3mnmA00 | 2.60.40.1230 | Mainly Beta › Sandwich › Immunoglobulin-like › Gamma-adaptin ear (GAE) domain | 0.55 | 38.0 | 3.65e-01 | 72.3% | 97.3% |
| 2nlkA02 | 3.90.190.10 | Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily | 0.55 | 49.0 | 3.59e-01 | 100.0% | 43.5% |
| 4depC02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.55 | 41.0 | 4.02e-01 | 78.7% | 92.2% |
| 4ikcA00 | 3.90.190.10 | Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily | 0.54 | 45.0 | 3.23e-01 | 96.8% | 31.0% |
| 1kiuB01 | 2.60.40.1090 | Mainly Beta › Sandwich › Immunoglobulin-like › Fimbrial-type adhesion domain | 0.54 | 47.0 | 3.94e-01 | 94.7% | 96.9% |
| 3akoC00 | 2.40.155.10 | Mainly Beta › Beta Barrel › Green Fluorescent Protein › Green fluorescent protein | 0.54 | 43.0 | 3.69e-01 | 85.1% | 79.2% |
| 6vfrA01 | 2.60.40.60 | Mainly Beta › Sandwich › Immunoglobulin-like › Cadherins | 0.54 | 40.0 | 3.91e-01 | 79.8% | 99.0% |
| 7tm7B01 | 3.40.50.2000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; | 0.53 | 46.0 | 3.02e-01 | 98.9% | 38.7% |
| 3c1aA02 | 3.30.360.10 | Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 | 0.53 | 47.0 | 4.07e-01 | 96.8% | 62.8% |
| 2e7mA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.53 | 41.0 | 4.04e-01 | 84.0% | 92.2% |
| 3loyA02 | 3.10.450.40 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.53 | 37.0 | 3.51e-01 | 74.5% | 60.5% |
| 3robA00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.53 | 41.0 | 3.71e-01 | 85.1% | 77.9% |
| 2c4mA01 | 3.40.50.2000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; | 0.53 | 41.0 | 2.73e-01 | 87.2% | 44.5% |
| 4dkmA00 | 2.40.155.10 | Mainly Beta › Beta Barrel › Green Fluorescent Protein › Green fluorescent protein | 0.52 | 42.0 | 3.28e-01 | 88.3% | 98.6% |
| 6vg1A01 | 2.60.40.60 | Mainly Beta › Sandwich › Immunoglobulin-like › Cadherins | 0.52 | 37.0 | 3.79e-01 | 75.5% | 100.0% |
| 1g4wR02 | 3.90.190.10 | Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily | 0.52 | 44.0 | 3.43e-01 | 96.8% | 42.1% |
| 4o8sA01 | 3.10.450.620 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › JHP933, nucleotidyltransferase-like core domain | 0.51 | 45.0 | 4.10e-01 | 96.8% | 81.6% |
| 4r6uA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.51 | 42.0 | 4.37e-01 | 88.3% | 98.9% |
| 6kghA02 | 3.30.450.330 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › | 0.50 | 42.0 | 3.59e-01 | 91.5% | 72.1% |
| 3e99A00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.50 | 40.0 | 3.48e-01 | 87.2% | 79.1% |
| 1fmbA00 | 2.40.70.10 | Mainly Beta › Beta Barrel › Cathepsin D, subunit A; domain 1 › Acid Proteases | 0.50 | 37.0 | 3.63e-01 | 92.6% | 71.2% |
ECOD (38)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3699984 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.65 | 57.0 | 3.85e-01 | 94.7% | 45.5% |
| 3651076 | 2011.2.1.16 ↗ | a/b three-layered sandwiches › Phosphorylase/hydrolase-like › Peptidyl-tRNA hydrolase-like › Peptidyl-tRNA hydrolase-like › DUF7894 | 0.65 | 51.0 | 3.77e-01 | 84.0% | 33.2% |
| 3171938 | 896.1.1.2 ↗ | a+b two layers › SRP9/14-like › Signal recognition particle alu RNA binding heterodimer SRP9/14-related › Signal recognition particle alu RNA binding heterodimer SRP9/14-related › SRP14 | 0.63 | 46.0 | 4.32e-01 | 75.5% | 83.3% |
| 3595150 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.63 | 57.0 | 4.02e-01 | 100.0% | 89.5% |
| 3219500 | 207.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats | 0.60 | 52.0 | 3.63e-01 | 98.9% | 28.4% |
| 3565560 | 211.1.1.0 ↗ | a+b two layers › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase | 0.60 | 48.0 | 5.03e-01 | 86.2% | 97.6% |
| 3910121 | 211.1.1.0 ↗ | a+b two layers › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase | 0.60 | 47.0 | 4.06e-01 | 85.1% | 84.7% |
| 3608479 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.60 | 53.0 | 3.25e-01 | 98.9% | 37.4% |
| 3700418 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.60 | 52.0 | 3.74e-01 | 96.8% | 57.5% |
| 3496012 | 11.1.5.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f | 0.60 | 46.0 | 3.77e-01 | 84.0% | 87.0% |
| 3466381 | 330.1.1.0 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like | 0.59 | 47.0 | 4.50e-01 | 96.8% | 73.6% |
| 3636713 | 2004.1.1.250 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Kinesin,Microtub_bd | 0.59 | 51.0 | 3.44e-01 | 94.7% | 47.6% |
| 4928702 | 2011.2.1.7 ↗ | a/b three-layered sandwiches › Phosphorylase/hydrolase-like › Peptidyl-tRNA hydrolase-like › Peptidyl-tRNA hydrolase-like › PAC2 | 0.59 | 45.0 | 3.40e-01 | 81.9% | 35.1% |
| 3861891 | 330.1.1.26 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › DSRM_RDM1 | 0.59 | 49.0 | 4.36e-01 | 100.0% | 64.4% |
| 3750534 | 2.1.1.257 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › PF30832 | 0.58 | 44.0 | 3.90e-01 | 94.7% | 55.6% |
| 4311607 | 4272.1.1.1 ↗ | a+b two layers › Nqo5-like › Nqo5-like › Nqo5-like › Complex1_30kDa | 0.58 | 43.0 | 3.86e-01 | 83.0% | 53.6% |
| 4514345 | 274.1.1.50 ↗ | a+b two layers › Pili subunits › Pili subunits › Pili subunits › Spore_YunB | 0.58 | 49.0 | 4.23e-01 | 91.5% | 95.2% |
| 4027383 | 2004.1.1.250 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Kinesin,Microtub_bd | 0.58 | 51.0 | 3.40e-01 | 97.9% | 51.6% |
| 3509244 | 11.1.1.41 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Arrestin_C | 0.58 | 41.0 | 3.39e-01 | 73.4% | 88.5% |
| 4816211 | 271.1.1.1 ↗ | beta barrels › GFP-like › GFP-like › GFP-like › GFP | 0.57 | 45.0 | 3.91e-01 | 83.0% | 84.6% |
| 3886066 | 11.1.1.588 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Fibulin_C | 0.57 | 47.0 | 4.28e-01 | 89.4% | 89.6% |
| 4970891 | 2011.2.1.7 ↗ | a/b three-layered sandwiches › Phosphorylase/hydrolase-like › Peptidyl-tRNA hydrolase-like › Peptidyl-tRNA hydrolase-like › PAC2 | 0.56 | 42.0 | 3.10e-01 | 80.9% | 31.4% |
| 3477928 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.55 | 45.0 | 3.83e-01 | 85.1% | 84.8% |
| 1139639 | 11.1.1.38 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Big_2 | 0.55 | 40.0 | 4.12e-01 | 76.6% | 97.7% |
| 3483131 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.55 | 43.0 | 4.22e-01 | 84.0% | 98.0% |
| 3239846 | 2007.2.3.1 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › (Phosphotyrosine protein) phosphatases II › Y_phosphatase | 0.55 | 48.0 | 3.39e-01 | 97.9% | 43.7% |
| 3562855 | 11.1.1.614 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig_ZP2 | 0.54 | 39.0 | 3.71e-01 | 77.7% | 100.0% |
| 5056240 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.53 | 41.0 | 3.94e-01 | 81.9% | 100.0% |
| 4500356 | 211.1.1.48 ↗ | a+b two layers › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › MpPF1 | 0.52 | 40.0 | 3.92e-01 | 80.9% | 89.0% |
| 3597472 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.52 | 42.0 | 4.03e-01 | 89.4% | 98.2% |
| 3494348 | 11.1.1.110 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Cadherin_2 | 0.51 | 38.0 | 3.50e-01 | 78.7% | 100.0% |
| 3582277 | 11.1.1.97 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › I-set | 0.51 | 45.0 | 4.08e-01 | 100.0% | 99.2% |
| 4983808 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.51 | 45.0 | 3.98e-01 | 98.9% | 80.7% |
| 3726388 | 243.5.1.0 ↗ | a+b two layers › Cystatin-like › Amine oxidase N-terminal region › Amine oxidase N-terminal region | 0.51 | 36.0 | 3.34e-01 | 74.5% | 58.4% |
| 3591184 | 5.1.3.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed | 0.51 | 41.0 | 2.73e-01 | 88.3% | 27.3% |
| 3195333 | 223.1.1.0 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains | 0.50 | 44.0 | 3.90e-01 | 95.7% | 93.3% |
| 3481284 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.50 | 42.0 | 3.70e-01 | 89.4% | 99.3% |
| 5039635 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.50 | 43.0 | 3.71e-01 | 95.7% | 99.3% |
D2
medium
residues 95-161
Domain cluster:
rep: MW385300.1__QQV88980.1__X__00121__D41-94