←Back to structures
MW358929.1__QQK88378.1__X__00034
Bact-VirMW358929.1__QQK88378.1__X__00034
Identity
- Accession:
- MW358929 ↗
- Kingdom:
- phage
Quality
86.3
mean pLDDT
Taxonomy
TaxID: 2800825
Cluster
View cluster (9 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 6-62
Domain cluster:
rep: MZ568829.1__QYW06337.1__M163_p47__00047__D3-57
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF15943.12 best | YdaS_toxin | 35.7 | 8.50e-09 | 98.2% | 84.6% |
CATH (12)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3bd1A00 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.88 | 80.0 | 7.64e-01 | 100.0% | 87.7% |
| 3bs3A00 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.81 | 72.0 | 7.16e-01 | 100.0% | 93.3% |
| 1lliA00 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.78 | 70.0 | 6.00e-01 | 100.0% | 67.4% |
| 2kpjA01 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.75 | 65.0 | 6.10e-01 | 100.0% | 80.0% |
| 2hinA00 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.74 | 63.0 | 6.02e-01 | 98.2% | 86.4% |
| 2r1jL00 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.74 | 63.0 | 6.04e-01 | 100.0% | 84.8% |
| 6b9sB02 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.73 | 61.0 | 5.75e-01 | 100.0% | 76.7% |
| 1au7A01 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.69 | 54.0 | 5.08e-01 | 87.7% | 87.5% |
| 4qbuA02 | 3.40.366.10 | Alpha Beta › 3-Layer(aba) Sandwich › Malonyl-Coenzyme A Acyl Carrier Protein; domain 2 › Malonyl-Coenzyme A Acyl Carrier Protein, domain 2 | 0.56 | 45.0 | 3.13e-01 | 100.0% | 92.5% |
| 8e9gE01 | 1.10.10.1590 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › NADH-quinone oxidoreductase subunit E | 0.54 | 35.0 | 3.46e-01 | 89.5% | 61.9% |
| 1nvmA02 | 1.10.8.60 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.54 | 37.0 | 3.55e-01 | 75.4% | 64.1% |
| 3p7nA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.52 | 44.0 | 4.09e-01 | 93.0% | 87.5% |
ECOD (15)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4004322 | 101.1.4.24 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › YdaS_toxin | 0.89 | 82.0 | 7.37e-01 | 100.0% | 76.0% |
| 3982350 | 101.1.4.3 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 | 0.83 | 72.0 | 6.74e-01 | 100.0% | 78.6% |
| 4950653 | 101.1.4.3 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 | 0.83 | 74.0 | 5.43e-01 | 100.0% | 40.0% |
| 166742 | 101.1.4.3 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 | 0.81 | 72.0 | 7.07e-01 | 100.0% | 90.3% |
| 3504520 | 101.1.4.3 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 | 0.80 | 71.0 | 5.84e-01 | 100.0% | 56.0% |
| 2833991 | 101.1.4.3 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 | 0.80 | 71.0 | 6.81e-01 | 100.0% | 86.2% |
| 5083215 | 101.1.4.18 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_31 | 0.80 | 72.0 | 6.90e-01 | 100.0% | 87.7% |
| 3963428 | 101.1.4.20 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_37 | 0.79 | 71.0 | 6.46e-01 | 100.0% | 78.7% |
| 4159770 | 101.1.4.3 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 | 0.76 | 65.0 | 5.96e-01 | 100.0% | 73.3% |
| 3944622 | 101.1.4.0 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like | 0.76 | 66.0 | 5.93e-01 | 100.0% | 76.2% |
| 3963750 | 101.1.4.0 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like | 0.73 | 62.0 | 5.64e-01 | 100.0% | 86.3% |
| 3583380 | 101.1.2.558 ↗ | alpha arrays › HTH › HTH › winged helix domain › CCD_aECM | 0.61 | 43.0 | 4.25e-01 | 94.7% | 71.7% |
| 3476104 | 2004.1.1.41 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ADK | 0.54 | 44.0 | 3.11e-01 | 100.0% | 29.8% |
| 3496302 | 2004.1.1.41 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ADK | 0.52 | 42.0 | 3.14e-01 | 100.0% | 45.6% |
| 3883209 | 2004.1.1.41 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ADK | 0.51 | 41.0 | 2.84e-01 | 100.0% | 24.8% |