←Back to structures
MW358930.1__QQK88428.1__X__00028
Bact-VirMW358930.1__QQK88428.1__X__00028
Identity
- Accession:
- MW358930 ↗
- Kingdom:
- phage
Quality
82.8
mean pLDDT
Taxonomy
Heunggongvirae›
Uroviricota›
Caudoviricetes›
Autographivirales›
Autoscriptoviridae›
Kakivirus›
Providencia_phage_PSTRCR_114
TaxID: 2800824
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 4-56
Domain cluster:
representative
CATH (5)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2khvA01 | 1.10.150.130 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Tyrosine recombinase, N-terminal domain | 0.74 | 55.0 | 4.74e-01 | 88.7% | 50.6% |
| 8fbnB01 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.70 | 54.0 | 3.57e-01 | 84.9% | 48.2% |
| 4v1gA00 | 1.20.20.10 | Mainly Alpha › Up-down Bundle › F1FO ATP Synthase › F1F0 ATP synthase subunit C | 0.61 | 52.0 | 4.52e-01 | 100.0% | 89.4% |
| 1lp1A00 | 1.20.5.420 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › Immunoglobulin FC, subunit C | 0.60 | 40.0 | 4.04e-01 | 84.9% | 67.3% |
| 2wgmA01 | 1.20.20.10 | Mainly Alpha › Up-down Bundle › F1FO ATP Synthase › F1F0 ATP synthase subunit C | 0.59 | 48.0 | 4.28e-01 | 100.0% | 63.4% |
ECOD (8)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4999414 | 7512.1.1.30 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glyco_transf_4 | 0.83 | 63.0 | 4.04e-01 | 81.1% | 25.7% |
| 3590589 | 3567.1.1.0 ↗ | a+b duplicates or obligate multimers › MPER trimer › MPER trimer › MPER trimer | 0.83 | 66.0 | 5.44e-01 | 84.9% | 55.6% |
| 3682015 | 3184.1.1.1 ↗ | alpha bundles › mRNA 3'-end-processing protein Rna15p hinge domain › mRNA 3'-end-processing protein Rna15p hinge domain › mRNA 3'-end-processing protein Rna15p hinge domain › CSTF2_hinge | 0.78 | 59.0 | 4.83e-01 | 83.0% | 49.0% |
| 3294389 | 3184.1.1.1 ↗ | alpha bundles › mRNA 3'-end-processing protein Rna15p hinge domain › mRNA 3'-end-processing protein Rna15p hinge domain › mRNA 3'-end-processing protein Rna15p hinge domain › CSTF2_hinge | 0.78 | 59.0 | 5.72e-01 | 83.0% | 78.3% |
| 3600781 | 3184.1.1.0 ↗ | alpha bundles › mRNA 3'-end-processing protein Rna15p hinge domain › mRNA 3'-end-processing protein Rna15p hinge domain › mRNA 3'-end-processing protein Rna15p hinge domain | 0.77 | 60.0 | 5.77e-01 | 84.9% | 75.0% |
| 3743337 | 3184.1.1.1 ↗ | alpha bundles › mRNA 3'-end-processing protein Rna15p hinge domain › mRNA 3'-end-processing protein Rna15p hinge domain › mRNA 3'-end-processing protein Rna15p hinge domain › CSTF2_hinge | 0.77 | 59.0 | 5.51e-01 | 83.0% | 70.8% |
| 3289118 | 101.1.4.0 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like | 0.73 | 55.0 | 4.21e-01 | 84.9% | 35.8% |
| 3417012 | 3003.1.1.0 ↗ | a+b complex topology › N-terminal subdomain in DNA replication initiator (cdc21/cdc54) › N-terminal subdomain in DNA replication initiator (cdc21/cdc54) › N-terminal subdomain in DNA replication initiator (cdc21/cdc54) | 0.71 | 59.0 | 4.63e-01 | 88.7% | 78.1% |