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MW366843.1__QQO90336.1__pEaSNUABM5_00194__00194

Bact-Vir

MW366843.1__QQO90336.1__pEaSNUABM5_00194__00194

Identity

Accession:
MW366843 ↗
Kingdom:
phage

Quality

75.6 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Rivsvirus› Erwinia_phage_pEa_SNUABM_5

TaxID: 2797313

Cluster

Singleton — not in a non-trivial cluster

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 12-60_125-279
PDB
Domain cluster: rep: NC_017972.1__YP_006382745.1__LU11_gp215__00215__D15-59_128-275
D2 high residues 63-122
PDB
Domain cluster: rep: PH2015_18_scaffold_2_prodigal-single.1__X__X__00499__D65-115
CATH (15)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4o1pD02 1.10.510.10 Mainly Alpha › Orthogonal Bundle › Transferase(Phosphotransferase); domain 1 › Transferase(Phosphotransferase) domain 1 0.62 47.0 3.13e-01 95.0% 20.2%
2o6yA01 1.10.275.10 Mainly Alpha › Orthogonal Bundle › Fumarase C; Chain B, domain 1 › Fumarase/aspartase (N-terminal domain) 0.61 48.0 3.42e-01 90.0% 53.8%
4annA00 1.10.510.10 Mainly Alpha › Orthogonal Bundle › Transferase(Phosphotransferase); domain 1 › Transferase(Phosphotransferase) domain 1 0.56 41.0 2.96e-01 93.3% 26.7%
2qntA01 3.10.180.10 Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 0.56 38.0 3.10e-01 96.7% 37.1%
1qoyA00 1.20.1170.10 Mainly Alpha › Up-down Bundle › Hemolysin E; Chain: A; › 0.55 47.0 3.07e-01 100.0% 64.4%
4anoA00 1.10.510.10 Mainly Alpha › Orthogonal Bundle › Transferase(Phosphotransferase); domain 1 › Transferase(Phosphotransferase) domain 1 0.54 40.0 2.83e-01 83.3% 53.1%
1g2nA00 1.10.565.10 Mainly Alpha › Orthogonal Bundle › Retinoid X Receptor › Retinoid X Receptor 0.53 40.0 2.75e-01 86.7% 48.4%
5iu1B00 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.53 37.0 3.16e-01 78.3% 80.4%
3beaA02 1.10.510.10 Mainly Alpha › Orthogonal Bundle › Transferase(Phosphotransferase); domain 1 › Transferase(Phosphotransferase) domain 1 0.51 43.0 3.11e-01 96.7% 34.4%
1guxB00 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.51 40.0 3.23e-01 95.0% 68.8%
8oh9B05 3.30.70.20 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.51 34.0 3.49e-01 100.0% 71.7%
6kzdA02 1.10.510.10 Mainly Alpha › Orthogonal Bundle › Transferase(Phosphotransferase); domain 1 › Transferase(Phosphotransferase) domain 1 0.51 42.0 3.07e-01 96.7% 41.1%
7xb6B01 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.50 43.0 3.09e-01 98.3% 98.9%
4itjB02 1.10.510.10 Mainly Alpha › Orthogonal Bundle › Transferase(Phosphotransferase); domain 1 › Transferase(Phosphotransferase) domain 1 0.50 41.0 2.99e-01 96.7% 42.0%
4n1yB00 1.10.565.10 Mainly Alpha › Orthogonal Bundle › Retinoid X Receptor › Retinoid X Receptor 0.50 41.0 2.90e-01 100.0% 70.9%
ECOD (22)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4516101 4354.1.1.1 ↗ a+b two layers › TRCF domain › TRCF domain › TRCF domain › TRCF 0.63 43.0 3.23e-01 71.7% 90.7%
3179147 376.1.6.1 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › IBR domain › IBR 0.61 41.0 3.73e-01 70.0% 81.2%
3751836 3134.1.1.1 ↗ a+b two layers › N-terminal domain of DC-UbP › N-terminal domain of DC-UbP › N-terminal domain of DC-UbP › UBD 0.60 44.0 3.97e-01 96.7% 56.5%
3994150 3525.1.1.2 ↗ alpha arrays › Bromodomain-containing protein 4 ET domain › Bromodomain-containing protein 4 ET domain › Bromodomain-containing protein 4 ET domain › AHD 0.57 40.0 3.78e-01 93.3% 61.3%
1916673 3758.1.1.2 ↗ alpha bundles › Bacterial hemolysins-like › Bacterial hemolysins › Bacterial hemolysins › HlyE 0.55 47.0 3.07e-01 100.0% 64.4%
4316812 321.1.1.6 ↗ a+b two layers › Glutamine synthetase-like › Glutamine synthetase/guanido kinase › Glutamine synthetase/guanido kinase › Pup_ligase 0.55 45.0 3.06e-01 100.0% 64.9%
3648293 109.4.1.195 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_11 0.55 40.0 2.60e-01 80.0% 16.9%
3631703 109.3.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat 0.54 46.0 3.40e-01 96.7% 38.1%
3250585 109.4.1.791 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_17 0.54 36.0 2.16e-01 71.7% 9.9%
4457163 109.3.1.20 ↗ alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank_2,Ank_4 0.54 41.0 3.18e-01 86.7% 65.3%
4610504 7515.1.1.2 ↗ a/b three-layered sandwiches › Alkaline phosphatase-like › Alkaline phosphatase-like › Alkaline phosphatase-like › Sulfatase 0.53 41.0 2.56e-01 88.3% 76.4%
4993740 633.21.1.48 ↗ alpha bundles › Bromodomain-like › Uncharacterized protein PA2107 › Uncharacterized protein PA2107 › DUF4418 0.53 44.0 3.52e-01 100.0% 83.0%
3991143 206.1.1.1 ↗ a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase 0.53 41.0 2.67e-01 88.3% 21.7%
3476114 2484.1.1.1 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › HSP70 0.52 40.0 2.56e-01 93.3% 43.2%
4251107 321.1.1.6 ↗ a+b two layers › Glutamine synthetase-like › Glutamine synthetase/guanido kinase › Glutamine synthetase/guanido kinase › Pup_ligase 0.52 43.0 2.70e-01 100.0% 44.9%
5007687 205.1.1.131 ↗ a+b two layers › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › Fer4_9 0.51 35.0 3.30e-01 100.0% 57.3%
3633074 206.1.1.0 ↗ a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase 0.51 40.0 2.81e-01 88.3% 30.7%
3942532 375.1.1.39 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Prim_Zn_Ribbon 0.51 40.0 3.70e-01 95.0% 87.1%
5003744 205.1.1.131 ↗ a+b two layers › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › Fer4_9 0.51 35.0 3.58e-01 100.0% 80.0%
5035952 221.4.1.1 ↗ a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX 0.51 40.0 3.08e-01 91.7% 90.0%
4531416 188.1.1.1 ↗ alpha arrays › Nuclear receptor ligand-binding domain › Nuclear receptor ligand-binding domain › Nuclear receptor ligand-binding domain › Hormone_recep 0.50 41.0 2.82e-01 100.0% 74.0%
5025380 874.1.1.1 ↗ a+b duplicates or obligate multimers › Smc hinge domain › Smc hinge domain › Smc hinge domain › SMC_hinge 0.50 43.0 3.22e-01 100.0% 39.4%
D3 high residues 517-636
PDB
Domain cluster: representative
CATH (22)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2cdqA03 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.64 34.0 4.06e-01 74.2% 75.0%
2fyxA00 3.30.70.1290 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Transposase IS200-like 0.63 43.0 4.23e-01 80.8% 63.8%
2a6mA00 3.30.70.1290 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Transposase IS200-like 0.63 43.0 4.17e-01 80.8% 63.1%
2phcB01 3.30.1360.40 Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › 0.62 39.0 4.57e-01 80.0% 91.6%
3c1mA02 3.30.2130.10 Alpha Beta › 2-Layer Sandwich › VC0802-like › VC0802-like 0.62 34.0 3.08e-01 74.2% 39.0%
2nyiA01 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.62 35.0 4.08e-01 71.7% 80.2%
3oreA01 3.30.1360.40 Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › 0.60 33.0 4.18e-01 70.0% 95.5%
1u8sA02 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.59 35.0 4.02e-01 75.0% 82.1%
3rkgA02 1.20.58.340 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Magnesium transport protein CorA, transmembrane region 0.58 37.0 3.36e-01 93.3% 47.6%
2iqiB00 3.40.50.10610 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › ABC-type transport auxiliary lipoprotein component 0.58 46.0 4.11e-01 85.8% 78.4%
2ctkA00 3.30.1370.10 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › K Homology domain, type 1 0.57 39.0 4.18e-01 93.3% 81.7%
2zy2A01 3.90.1150.10 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 0.56 46.0 4.24e-01 86.7% 88.9%
2r7rA04 3.30.70.2480 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.55 35.0 3.23e-01 78.3% 48.4%
1dosA00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.55 41.0 2.97e-01 78.3% 89.4%
2cteA01 3.30.1370.10 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › K Homology domain, type 1 0.55 34.0 4.02e-01 80.0% 92.4%
1wp1B01 1.20.1600.10 Mainly Alpha › Up-down Bundle › Outer membrane efflux proteins (OEP) › Outer membrane efflux proteins (OEP) 0.55 44.0 3.09e-01 85.0% 47.7%
1ctfA00 3.30.1390.10 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein L30; Chain: A, › Ribosomal protein L7/L12, C-terminal domain/Adaptor protein ClpS 0.54 28.0 3.50e-01 71.7% 85.3%
3p96A02 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.53 32.0 3.72e-01 77.5% 84.5%
7dl9A01 1.20.1250.20 Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › MFS general substrate transporter like domains 0.52 42.0 3.63e-01 98.3% 54.6%
1lhpA00 3.40.1190.20 Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase 0.51 46.0 3.37e-01 97.5% 45.8%
2vm6A00 1.10.437.10 Mainly Alpha › Orthogonal Bundle › Apoptosis Regulator Bcl-x › Blc2-like 0.50 41.0 3.84e-01 94.2% 71.5%
7d5qA01 1.20.1250.20 Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › MFS general substrate transporter like domains 0.50 43.0 3.81e-01 100.0% 63.2%
ECOD (34)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4652188 171.1.1.1 ↗ alpha arrays › RNase III catalytic domain-like › RNase III catalytic domain-like › RNase III catalytic domain-like › Ribonuclease_3 0.67 52.0 4.89e-01 82.5% 90.3%
4165721 304.8.1.21 ↗ a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT_9 0.67 37.0 4.75e-01 75.8% 94.3%
5017694 304.55.2.1 ↗ a+b two layers › Alpha-beta plaits › Origin of replication-binding domains › Transposase IS200-like › Y1_Tnp 0.64 44.0 4.10e-01 80.8% 56.0%
4929473 304.39.1.0 ↗ a+b two layers › Alpha-beta plaits › Mechanosensitive channel protein MscS (YggB), C-terminal domain › Mechanosensitive channel protein MscS (YggB), C-terminal domain 0.63 41.0 4.77e-01 80.8% 92.9%
3672078 304.8.1.21 ↗ a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT_9 0.63 37.0 4.54e-01 77.5% 93.3%
3227219 304.120.1.10 ↗ a+b two layers › Alpha-beta plaits › Ferredoxin-like domain in ThiI › Ferredoxin-like domain in ThiI › PF25904 0.62 32.0 4.03e-01 71.7% 84.3%
3440140 4070.1.1.2 ↗ alpha arrays › FtsH protease domain-like › FtsH protease domain-like › FtsH protease domain-like › Peptidase_M50 0.62 43.0 3.35e-01 71.7% 48.9%
5058480 4070.1.1.0 ↗ alpha arrays › FtsH protease domain-like › FtsH protease domain-like › FtsH protease domain-like 0.61 44.0 4.06e-01 75.8% 57.4%
4946547 604.1.1.0 ↗ alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat 0.61 42.0 4.29e-01 70.8% 80.0%
4994291 4070.1.1.0 ↗ alpha arrays › FtsH protease domain-like › FtsH protease domain-like › FtsH protease domain-like 0.61 43.0 3.55e-01 72.5% 80.9%
4358940 304.8.1.21 ↗ a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT_9 0.59 34.0 3.87e-01 74.2% 77.6%
5061893 4070.1.1.3 ↗ alpha arrays › FtsH protease domain-like › FtsH protease domain-like › FtsH protease domain-like › DUF3267 0.59 48.0 3.93e-01 88.3% 77.8%
5035004 4070.1.1.0 ↗ alpha arrays › FtsH protease domain-like › FtsH protease domain-like › FtsH protease domain-like 0.58 46.0 3.61e-01 86.7% 95.1%
3383879 304.8.1.0 ↗ a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.57 35.0 4.23e-01 75.0% 98.7%
4640051 4070.1.1.0 ↗ alpha arrays › FtsH protease domain-like › FtsH protease domain-like › FtsH protease domain-like 0.57 46.0 4.01e-01 88.3% 66.8%
3736252 5051.1.1.10 ↗ alpha complex topology › Sodium:neurotransmitter symporter family (SNF)-like › Sodium:neurotransmitter symporter family (SNF)-like › Sodium:neurotransmitter symporter family (SNF)-like › AA_permease_2 0.56 50.0 3.27e-01 97.5% 67.3%
4045052 3016.1.1.0 ↗ a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases 0.56 45.0 4.65e-01 86.7% 100.0%
4034524 3016.1.1.0 ↗ a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases 0.56 31.0 3.72e-01 77.5% 88.6%
5049590 1015.1.1.2 ↗ alpha complex topology › Insulin-induced gene (Insig) homologs › Insulin-induced gene (Insig) homologs › Insulin-induced gene (Insig) homologs › Caroten_synth 0.55 49.0 3.73e-01 100.0% 84.7%
5069993 4070.1.1.4 ↗ alpha arrays › FtsH protease domain-like › FtsH protease domain-like › FtsH protease domain-like › Peptidase_M50B 0.55 44.0 3.87e-01 86.7% 58.2%
5003946 4070.1.1.2 ↗ alpha arrays › FtsH protease domain-like › FtsH protease domain-like › FtsH protease domain-like › Peptidase_M50 0.54 44.0 3.70e-01 87.5% 58.1%
3733063 5051.1.1.10 ↗ alpha complex topology › Sodium:neurotransmitter symporter family (SNF)-like › Sodium:neurotransmitter symporter family (SNF)-like › Sodium:neurotransmitter symporter family (SNF)-like › AA_permease_2 0.54 48.0 3.22e-01 98.3% 50.6%
4981647 4070.1.1.4 ↗ alpha arrays › FtsH protease domain-like › FtsH protease domain-like › FtsH protease domain-like › Peptidase_M50B 0.53 43.0 3.70e-01 85.8% 55.9%
3183400 5050.1.1.0 ↗ alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter 0.53 48.0 3.92e-01 99.2% 62.7%
3590761 3016.1.1.0 ↗ a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases 0.53 30.0 3.64e-01 74.2% 89.3%
4946403 3646.1.1.1 ↗ alpha complex topology › T-component of energy-coupling factor (ECF) transporters › T-component of energy-coupling factor (ECF) transporters › T-component of energy-coupling factor (ECF) transporters › CbiQ 0.52 39.0 3.09e-01 76.7% 39.6%
3689712 5050.1.1.0 ↗ alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter 0.52 45.0 3.69e-01 92.5% 88.4%
3290460 5050.1.1.9 ↗ alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › MFS_1 0.52 42.0 3.65e-01 100.0% 55.3%
3729154 5050.1.1.9 ↗ alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › MFS_1 0.52 44.0 3.63e-01 92.5% 86.8%
3725961 5051.1.1.10 ↗ alpha complex topology › Sodium:neurotransmitter symporter family (SNF)-like › Sodium:neurotransmitter symporter family (SNF)-like › Sodium:neurotransmitter symporter family (SNF)-like › AA_permease_2 0.52 44.0 2.95e-01 93.3% 79.0%
3282783 5050.1.1.9 ↗ alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › MFS_1 0.51 43.0 3.76e-01 100.0% 59.5%
4404895 3016.1.1.17 ↗ a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › GcvP2_C 0.51 38.0 3.49e-01 77.5% 65.2%
4014232 5051.1.1.0 ↗ alpha complex topology › Sodium:neurotransmitter symporter family (SNF)-like › Sodium:neurotransmitter symporter family (SNF)-like › Sodium:neurotransmitter symporter family (SNF)-like 0.51 45.0 2.99e-01 98.3% 50.7%
165918 620.1.1.6 ↗ alpha bundles › YfiT-like putative metal-dependent hydrolases › YfiT-like putative metal-dependent hydrolases › YfiT-like putative metal-dependent hydrolases › DinB_2 0.50 38.0 3.37e-01 79.2% 87.4%
D4 medium residues 287-401
PDB
Domain cluster: representative
CATH (12)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2ggfA00 1.25.40.180 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › 0.68 57.0 5.38e-01 90.4% 94.2%
3peuB00 1.25.40.510 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › GLE1-like 0.64 57.0 4.27e-01 100.0% 93.2%
5dikA00 1.20.1290.10 Mainly Alpha › Up-down Bundle › AhpD-like › AhpD-like 0.64 44.0 4.48e-01 70.4% 78.6%
4eadA01 1.20.970.10 Mainly Alpha › Up-down Bundle › Transferase, Pyrimidine Nucleoside Phosphorylase; Chain A, domain 3 › Transferase, Pyrimidine Nucleoside Phosphorylase; Chain C 0.61 48.0 4.98e-01 85.2% 100.0%
8a3tD01 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.61 53.0 3.73e-01 96.5% 52.0%
2wzkA01 1.20.1310.10 Mainly Alpha › Up-down Bundle › 5 helical Cullin repeat like › Cullin Repeats 0.60 42.0 4.11e-01 73.0% 96.1%
2wpvE00 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.60 51.0 3.89e-01 95.7% 57.9%
7yb9A01 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.59 53.0 4.33e-01 100.0% 88.1%
7qihA01 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.53 42.0 4.46e-01 88.7% 100.0%
2bk9A00 1.10.490.10 Mainly Alpha › Orthogonal Bundle › Globin-like › Globins 0.52 37.0 3.43e-01 75.7% 85.6%
1ouvA00 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.52 44.0 3.53e-01 100.0% 58.9%
2kckA00 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.51 42.0 4.28e-01 96.5% 93.8%
ECOD (20)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3748301 109.23.1.3 ↗ alpha superhelices › Repetitive alpha hairpins › C-terminal domain in vacuolar protein sorting-associated protein 54 › C-terminal domain in vacuolar protein sorting-associated protein 54 › BCD_RFX 0.68 46.0 4.22e-01 70.4% 74.8%
3810030 109.4.1.1293 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_1 0.66 58.0 4.56e-01 96.5% 61.7%
3838017 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.65 54.0 4.14e-01 89.6% 50.4%
3428376 109.4.1.1258 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_1, PPR_2 0.64 55.0 4.59e-01 94.8% 72.7%
3348410 109.4.1.1256 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, PPR_3 0.63 51.0 3.39e-01 88.7% 27.5%
3655489 109.4.1.775 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.62 51.0 3.98e-01 87.8% 55.5%
3423911 109.4.1.621 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR_3 0.61 49.0 3.98e-01 87.8% 62.2%
3673237 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.60 51.0 4.05e-01 93.0% 60.9%
3651383 109.4.1.883 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR+PPR_2 0.59 50.0 4.01e-01 93.0% 73.5%
3437824 109.4.1.1269 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, E_motif 0.58 51.0 3.41e-01 100.0% 54.7%
3355930 109.4.1.1495 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PF26522 0.55 40.0 4.06e-01 77.4% 98.3%
3502787 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.55 44.0 4.35e-01 100.0% 80.8%
4018262 109.4.1.1437 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › ANAPC3, TPR_8 0.55 47.0 4.26e-01 97.4% 99.4%
4250272 109.4.1.186 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › ANAPC3 0.54 44.0 3.64e-01 90.4% 65.1%
2875706 109.4.1.1613 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_2, ANAPC3, TPR_8 0.54 42.0 4.47e-01 93.9% 99.0%
3647515 109.4.1.1606 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PF30484 0.53 45.0 4.60e-01 100.0% 100.0%
4029405 109.4.1.584 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Fis1_TPR_C 0.53 42.0 3.95e-01 86.1% 74.3%
3638030 109.4.1.186 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › ANAPC3 0.52 46.0 3.77e-01 100.0% 74.5%
3895466 109.4.1.1390 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PF31234 0.52 45.0 3.83e-01 99.1% 80.5%
3976808 109.4.1.109 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Sel1 0.51 44.0 3.99e-01 99.1% 69.8%
D5 medium residues 402-511
PDB
Domain cluster: representative
CATH (4)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2ouxA01 1.25.60.10 Mainly Alpha › Alpha Horseshoe › MgtE N-terminal fold › MgtE N-terminal domain-like 0.60 42.0 4.05e-01 100.0% 62.5%
1paqA00 1.25.40.180 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › 0.58 52.0 4.62e-01 100.0% 68.9%
3hjlA02 1.10.220.30 Mainly Alpha › Orthogonal Bundle › Annexin V; domain 1 › Flagellar motor switch protein FliG, alpha-alpha superhelical domain 0.54 32.0 3.33e-01 92.7% 60.4%
1vdyA00 1.25.40.90 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › 0.50 44.0 4.10e-01 100.0% 85.7%
ECOD (5)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3742438 189.1.1.0 ↗ alpha bundles › GTPase activation domain, GAP › GTPase activation domain, GAP › GTPase activation domain, GAP 0.56 49.0 3.64e-01 100.0% 57.3%
3925443 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.54 41.0 3.88e-01 100.0% 64.3%
3509014 108.1.1.28 ↗ alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_6,EF-hand_7 0.52 27.0 2.88e-01 71.8% 52.6%
3616381 109.4.1.871 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › INTS1_R4 0.52 38.0 3.50e-01 100.0% 56.8%
4256843 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.50 34.0 3.41e-01 99.1% 65.0%