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MW366843.1__QQO90403.1__pEaSNUABM5_00261__00261

Bact-Vir

MW366843.1__QQO90403.1__pEaSNUABM5_00261__00261

Identity

Accession:
MW366843 ↗
Kingdom:
phage

Quality

83.6 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 1-60
PDB
Domain cluster: representative
CATH (46)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3bm7A00 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.70 52.0 4.35e-01 80.0% 49.1%
2n8lA00 3.30.310.210 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › 0.66 47.0 3.37e-01 78.3% 25.7%
3fgvA00 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.66 48.0 4.24e-01 80.0% 52.7%
3b8pA00 3.30.1890.10 Alpha Beta › 2-Layer Sandwich › Bacterial polysaccharide co-polymerase-like › FepE-like 0.65 49.0 3.40e-01 83.3% 97.1%
3i3wA04 3.30.310.50 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Alpha-D-phosphohexomutase, C-terminal domain 0.64 48.0 4.47e-01 81.7% 66.2%
2uvaG03 3.30.70.3320 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.64 47.0 3.90e-01 78.3% 47.2%
3wx4A00 3.30.70.2770 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.62 48.0 4.13e-01 85.0% 54.1%
2mq8A00 3.30.70.600 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S10 0.62 46.0 3.82e-01 81.7% 49.1%
1o51A00 3.30.70.120 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.62 44.0 3.97e-01 78.3% 58.4%
3ramA02 3.30.70.360 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.62 45.0 3.70e-01 80.0% 60.2%
8c46A01 3.30.70.360 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.61 45.0 3.74e-01 81.7% 64.9%
1gd8A00 3.90.1030.10 Alpha Beta › Alpha-Beta Complex › 50s Ribosomal Protein L17; Chain: A, › Ribosomal protein L17 0.61 43.0 3.71e-01 78.3% 81.0%
1jmxA02 2.40.128.120 Mainly Beta › Beta Barrel › Lipocalin › Quinohemoprotein amine dehydrogenase alpha subunit, domain 2 0.60 37.0 3.11e-01 70.0% 33.9%
3bguA01 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.60 43.0 3.79e-01 78.3% 54.2%
3oguA03 3.30.460.10 Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › Beta Polymerase, domain 2 0.60 46.0 3.72e-01 86.7% 95.1%
1j4wA01 3.30.1370.10 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › K Homology domain, type 1 0.59 43.0 4.10e-01 80.0% 66.2%
4v19R01 3.90.1030.10 Alpha Beta › Alpha-Beta Complex › 50s Ribosomal Protein L17; Chain: A, › Ribosomal protein L17 0.58 41.0 3.50e-01 78.3% 78.6%
4p4mA02 3.30.460.10 Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › Beta Polymerase, domain 2 0.58 42.0 3.56e-01 81.7% 46.1%
1vw4L01 3.90.1030.10 Alpha Beta › Alpha-Beta Complex › 50s Ribosomal Protein L17; Chain: A, › Ribosomal protein L17 0.58 42.0 3.34e-01 80.0% 72.6%
1m0sA02 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.57 38.0 3.60e-01 78.3% 56.9%
5b08A00 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.57 41.0 3.60e-01 80.0% 55.0%
4i99A00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.57 44.0 2.90e-01 91.7% 21.4%
7ojuA01 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.57 47.0 3.26e-01 90.0% 94.9%
3nuhB03 3.10.20.690 Alpha Beta › Roll › Ubiquitin-like (UB roll) › 0.56 44.0 3.96e-01 93.3% 59.6%
3pm9A04 3.30.70.2740 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.56 40.0 3.73e-01 85.0% 56.3%
1nbeB01 3.30.70.140 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Aspartate carbamoyltransferase regulatory subunit, N-terminal domain 0.56 40.0 3.53e-01 80.0% 49.5%
1emsA02 3.30.428.10 Alpha Beta › 2-Layer Sandwich › HIT family, subunit A › HIT-like 0.56 44.0 3.59e-01 93.3% 79.2%
3g8qA02 3.30.70.1940 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.55 40.0 3.67e-01 78.3% 61.3%
3zh8C01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.55 43.0 3.58e-01 90.0% 85.2%
2bcqA03 3.30.460.10 Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › Beta Polymerase, domain 2 0.54 41.0 3.39e-01 86.7% 92.7%
1av5A00 3.30.428.10 Alpha Beta › 2-Layer Sandwich › HIT family, subunit A › HIT-like 0.54 43.0 3.67e-01 95.0% 96.5%
7o4xA01 3.30.70.120 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.54 42.0 3.67e-01 90.0% 89.9%
3swoA02 2.40.110.10 Mainly Beta › Beta Barrel › Butyryl-CoA Dehydrogenase, subunit A; domain 2 › Butyryl-CoA Dehydrogenase, subunit A, domain 2 0.54 39.0 3.38e-01 81.7% 90.4%
3qooA00 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.54 41.0 3.22e-01 83.3% 65.7%
4b96A00 2.60.40.710 Mainly Beta › Sandwich › Immunoglobulin-like › Endoglucanase-like 0.53 39.0 3.03e-01 83.3% 32.5%
2k3iA01 3.30.70.860 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.53 39.0 3.63e-01 83.3% 62.4%
3h9wA00 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.53 37.0 3.22e-01 78.3% 52.3%
2ihmB03 3.30.460.10 Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › Beta Polymerase, domain 2 0.53 41.0 3.48e-01 91.7% 100.0%
3o4fH02 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.52 41.0 2.95e-01 95.0% 80.3%
1sz7A00 3.30.1380.20 Alpha Beta › 2-Layer Sandwich › Muramoyl-pentapeptide Carboxypeptidase; domain 2 › Trafficking protein particle complex subunit 3 0.52 38.0 2.96e-01 83.3% 49.1%
6qmmA02 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.52 43.0 3.02e-01 96.7% 81.7%
2nwuB01 3.30.1440.10 Alpha Beta › 2-Layer Sandwich › 50s Ribosomal Protein L5; Chain: A, › Ribosomal protein L5 0.52 35.0 2.81e-01 70.0% 57.9%
7ahfA01 3.10.110.10 Alpha Beta › Roll › Ubiquitin Conjugating Enzyme › Ubiquitin Conjugating Enzyme 0.52 39.0 3.01e-01 83.3% 98.6%
3lnlB02 3.30.70.120 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.51 38.0 3.39e-01 81.7% 86.4%
1t0tV02 3.30.70.1030 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Apc35880; domain 1 0.51 36.0 3.10e-01 80.0% 54.1%
2khdA00 3.30.70.860 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.50 39.0 3.34e-01 90.0% 75.9%
ECOD (53)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3837975 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.72 56.0 4.09e-01 85.0% 32.1%
3280788 304.4.1.4 a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › ABM 0.69 52.0 4.47e-01 83.3% 51.6%
4411246 304.162.1.1 a+b two layers › Alpha-beta plaits › Competence or damage-inducible protein CinA middle domain › Competence or damage-inducible protein CinA middle domain › CinA_KH 0.67 45.0 4.18e-01 80.0% 53.8%
3498546 304.162.1.2 a+b two layers › Alpha-beta plaits › Competence or damage-inducible protein CinA middle domain › Competence or damage-inducible protein CinA middle domain › FLAD1_M 0.65 47.0 4.44e-01 81.7% 62.7%
5077739 304.43.1.0 a+b two layers › Alpha-beta plaits › Hypothetical protein TT1725 › Hypothetical protein TT1725 0.64 46.0 4.26e-01 83.3% 58.7%
3407748 327.11.2.1 a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) › KH_1 0.63 45.0 3.94e-01 78.3% 51.6%
5001363 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.62 49.0 4.49e-01 88.3% 73.8%
4054500 601.7.1.40 alpha bundles › Four-helical up-and-down bundle › HEPN › Nucleotidyltransferase substrate binding subunit/domain › Cas13a_C 0.61 44.0 2.57e-01 76.7% 32.1%
5032056 304.8.1.0 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.61 45.0 3.85e-01 80.0% 46.6%
4016271 246.3.1.0 a+b four layers › Carbon-nitrogen hydrolase-like › DNase I-like › DNase I-like 0.61 47.0 4.18e-01 86.7% 91.1%
4162002 304.102.1.2 a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › TruD 0.61 46.0 3.31e-01 81.7% 92.0%
4984373 3926.1.1.1 alpha bundles › V-type proton ATPase subunit D › V-type proton ATPase subunit D › V-type proton ATPase subunit D › ATP-synt_D 0.61 41.0 2.84e-01 70.0% 88.3%
3894384 327.11.2.0 a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) 0.60 43.0 4.18e-01 78.3% 67.1%
166476 304.4.1.14 a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › Dabb 0.60 43.0 3.78e-01 78.3% 53.6%
4946427 2004.1.1.308 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_21 0.60 46.0 2.97e-01 88.3% 20.9%
3276647 316.1.1.24 a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › DNA_pol_B_thumb,DNA_pol_B_palm 0.59 48.0 3.48e-01 95.0% 61.4%
3711992 218.3.1.0 a+b two layers › Enolase-N/ribosomal protein › Prokaryotic ribosomal protein L17 › Prokaryotic ribosomal protein L17 0.59 32.0 2.59e-01 83.3% 25.8%
1175570 101.1.2.17 alpha arrays › HTH › HTH › winged helix domain 0.59 46.0 3.76e-01 91.7% 52.4%
4255094 304.28.1.35 a+b two layers › Alpha-beta plaits › Ferredoxin domains in multidrug efflux transporter › Multidrug efflux transporter AcrB pore domain › Amnionless 0.58 43.0 3.71e-01 85.0% 49.1%
3510769 304.8.1.0 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.58 42.0 3.72e-01 80.0% 50.5%
3175120 242.1.1.2 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_2 0.58 43.0 3.54e-01 80.0% 65.5%
4997803 873.1.1.13 a+b complex topology › H-NOX domain › H-NOX domain › H-NOX domain › ATC_hydrolase 0.57 43.0 3.27e-01 86.7% 47.3%
5062792 3012.1.1.0 a+b two layers › Cof C2 cap domain › Cof C2 cap domain › Cof C2 cap domain 0.57 44.0 4.17e-01 90.0% 84.0%
162832 316.1.1.24 a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › DNA_pol_B_thumb,DNA_pol_B_palm 0.57 45.0 3.35e-01 95.0% 62.1%
3264956 316.1.1.36 a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › MTPAP-like_central 0.57 39.0 3.24e-01 75.0% 40.0%
3648590 101.1.2.497 alpha arrays › HTH › HTH › winged helix domain › PF25874 0.56 41.0 3.80e-01 80.0% 68.8%
5043596 304.15.1.0 a+b two layers › Alpha-beta plaits › Viral DNA-binding domain › Viral DNA-binding domain 0.56 41.0 3.48e-01 83.3% 47.8%
None 0.56 41.0 3.00e-01 81.7% 96.7%
5049726 873.1.1.13 a+b complex topology › H-NOX domain › H-NOX domain › H-NOX domain › ATC_hydrolase 0.55 41.0 3.14e-01 85.0% 48.7%
3823835 304.4.1.78 a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › DUF7036 0.55 41.0 3.59e-01 88.3% 56.2%
4862964 3675.1.1.1 a+b complex topology › DNA gyrase subunit B insertion domain › DNA gyrase subunit B insertion domain › DNA gyrase subunit B insertion domain › GyrB_insert 0.54 43.0 3.15e-01 93.3% 29.9%
142530 222.1.1.21 a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase › FlK 0.54 41.0 3.21e-01 83.3% 65.2%
4951832 873.1.1.0 a+b complex topology › H-NOX domain › H-NOX domain › H-NOX domain 0.53 41.0 3.20e-01 90.0% 39.4%
4934098 304.19.1.1 a+b two layers › Alpha-beta plaits › eIF-2-alpha, C-terminal domain › eIF-2-alpha, C-terminal domain › EIF_2_alpha 0.53 37.0 3.47e-01 80.0% 55.3%
4943280 312.1.1.2 a+b three layers › HIT-like › HIT-related › HIT-related › HIT 0.53 42.0 3.63e-01 98.3% 97.4%
2581405 225.1.1.7 a+b two layers › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase-like › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › HATPase_c_3 0.52 35.0 3.17e-01 70.0% 50.0%
4538961 304.14.1.1 a+b two layers › Alpha-beta plaits › Sporulation related repeat (SPOR) › Sporulation related repeat (SPOR) › SPOR 0.52 38.0 3.60e-01 80.0% 65.3%
3254218 223.2.1.32 a+b three layers › Profilin-like › profilin-like › profilin-like › Fuz_longin_2 0.52 40.0 3.26e-01 93.3% 73.6%
3781990 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.51 36.0 3.23e-01 73.3% 89.4%
5007648 873.1.1.13 a+b complex topology › H-NOX domain › H-NOX domain › H-NOX domain › ATC_hydrolase 0.51 40.0 2.90e-01 93.3% 39.5%
4978387 873.1.1.13 a+b complex topology › H-NOX domain › H-NOX domain › H-NOX domain › ATC_hydrolase 0.51 37.0 2.98e-01 83.3% 44.1%
5036327 304.114.1.0 a+b two layers › Alpha-beta plaits › Family B DNA polymerase insertion domain › Family B DNA polymerase insertion domain 0.51 35.0 3.44e-01 81.7% 66.2%
3926824 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.51 40.0 3.20e-01 91.7% 58.5%
3187043 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.51 36.0 3.17e-01 75.0% 93.3%
3786625 109.4.1.165 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Dsl1_C 0.51 43.0 2.56e-01 100.0% 25.9%
4962967 304.4.1.9 a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › Chlor_dismutase 0.51 36.0 2.94e-01 80.0% 44.4%
146692 304.4.1.9 a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › Chlor_dismutase 0.51 36.0 3.08e-01 80.0% 52.6%
3896352 632.6.1.14 alpha bundles › immunoglobulin/albumin-binding domain-like › Plasmid maintenance system epsilon/zeta, antidote epsilon subunit › Plasmid maintenance system epsilon/zeta, antidote epsilon subunit › Med15_C 0.51 38.0 3.32e-01 90.0% 99.1%
5062980 873.1.1.1 a+b complex topology › H-NOX domain › H-NOX domain › H-NOX domain › V4R 0.50 37.0 3.00e-01 88.3% 46.7%
5047390 873.1.1.13 a+b complex topology › H-NOX domain › H-NOX domain › H-NOX domain › ATC_hydrolase 0.50 38.0 2.96e-01 86.7% 38.3%
3262452 246.3.1.1 a+b four layers › Carbon-nitrogen hydrolase-like › DNase I-like › DNase I-like › Exo_endo_phos 0.50 40.0 3.09e-01 95.0% 81.9%
1235054 304.4.1.9 a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › Chlor_dismutase 0.50 36.0 2.98e-01 80.0% 42.6%
5022929 873.1.1.1 a+b complex topology › H-NOX domain › H-NOX domain › H-NOX domain › V4R 0.50 38.0 3.02e-01 88.3% 49.0%