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MW367417.1__QQG33437.1__X__00131
Bact-VirMW367417.1__QQG33437.1__X__00131
Identity
- Accession:
- MW367417 ↗
- Kingdom:
- phage
Quality
93.8
mean pLDDT
Taxonomy
TaxID: 2798043
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 10-41
Domain cluster:
representative
CATH (28)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1f2uB00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.65 | 49.0 | 3.38e-01 | 100.0% | 24.8% |
| 2ivwA01 | 2.30.30.830 | Mainly Beta › Roll › SH3 type barrels. › | 0.62 | 46.0 | 3.66e-01 | 93.8% | 33.8% |
| 2sliA03 | 2.40.220.10 | Mainly Beta › Beta Barrel › Intramolecular trans-sialidase; domain 3 › Intramolecular Trans-sialidase; Domain 3 | 0.62 | 46.0 | 3.54e-01 | 100.0% | 35.0% |
| 1r8oB01 | 2.30.30.480 | Mainly Beta › Roll › SH3 type barrels. › | 0.61 | 46.0 | 3.91e-01 | 96.9% | 59.1% |
| 1l8rA00 | 3.10.260.20 | Alpha Beta › Roll › Mlu1-box Binding Protein; DNA-binding Domain › Ski | 0.61 | 43.0 | 3.14e-01 | 81.2% | 26.7% |
| 2uvaG01 | 1.20.1050.120 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.60 | 43.0 | 2.97e-01 | 81.2% | 69.1% |
| 3hlzA02 | 1.20.120.1090 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › | 0.60 | 45.0 | 3.19e-01 | 96.9% | 25.6% |
| 3oajA02 | 3.10.180.10 | Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 | 0.59 | 45.0 | 3.06e-01 | 96.9% | 26.4% |
| 4ntqB00 | 3.30.2450.20 | Alpha Beta › 2-Layer Sandwich › Secreted effector protein pipB2 fold › | 0.59 | 42.0 | 2.99e-01 | 93.8% | 47.6% |
| 4mtlA00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.58 | 40.0 | 2.61e-01 | 90.6% | 44.2% |
| 1sbxA00 | 3.10.260.20 | Alpha Beta › Roll › Mlu1-box Binding Protein; DNA-binding Domain › Ski | 0.57 | 43.0 | 3.24e-01 | 100.0% | 72.6% |
| 1sb2B00 | 3.10.100.10 | Alpha Beta › Roll › Mannose-Binding Protein A; Chain A › Mannose-Binding Protein A, subunit A | 0.56 | 39.0 | 2.77e-01 | 81.2% | 33.9% |
| 1zcdA00 | 1.20.1530.10 | Mainly Alpha › Up-down Bundle › Na+/H+ antiporter like fold › Na+/H+ antiporter like domain | 0.56 | 39.0 | 2.25e-01 | 81.2% | 48.7% |
| 2fgtA02 | 3.10.450.310 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.55 | 39.0 | 3.29e-01 | 100.0% | 89.0% |
| 5e0sB00 | 3.90.226.10 | Alpha Beta › Alpha-Beta Complex › 2-enoyl-CoA Hydratase; Chain A, domain 1 › 2-enoyl-CoA Hydratase; Chain A, domain 1 | 0.55 | 39.0 | 2.46e-01 | 78.1% | 12.4% |
| 8gsxA01 | 2.60.40.740 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.55 | 39.0 | 2.80e-01 | 100.0% | 72.2% |
| 2v3aA03 | 3.30.390.120 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › | 0.55 | 38.0 | 3.44e-01 | 93.8% | 50.0% |
| 1fmd200 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.54 | 40.0 | 2.56e-01 | 93.8% | 70.2% |
| 3rv0B03 | 3.30.160.20 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.54 | 39.0 | 3.29e-01 | 96.9% | 51.9% |
| 6cz7A01 | 2.20.25.90 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › ADC-like domains | 0.54 | 37.0 | 3.38e-01 | 90.6% | 53.2% |
| 4n01A01 | 3.40.50.1980 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nitrogenase molybdenum iron protein domain | 0.53 | 36.0 | 2.68e-01 | 75.0% | 94.9% |
| 1e88A03 | 2.10.70.10 | Mainly Beta › Ribbon › Complement Module; domain 1 › Complement Module, domain 1 | 0.52 | 36.0 | 3.55e-01 | 75.0% | 59.5% |
| 5bukB00 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.52 | 35.0 | 2.08e-01 | 100.0% | 37.3% |
| 5cqgA02 | 3.10.10.20 | Alpha Beta › Roll › HIV Type 1 Reverse Transcriptase; Chain A, domain 1 › | 0.52 | 38.0 | 3.17e-01 | 84.4% | 59.7% |
| 1ti2B01 | 3.30.70.20 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.51 | 35.0 | 2.65e-01 | 100.0% | 88.0% |
| 2jl8102 | 3.30.160.850 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.51 | 38.0 | 3.63e-01 | 100.0% | 88.9% |
| 4j80A02 | 2.60.260.20 | Mainly Beta › Sandwich › HSP40/DNAj peptide-binding domain › Urease metallochaperone UreE, N-terminal domain | 0.51 | 38.0 | 3.26e-01 | 100.0% | 63.6% |
| 4mtnA01 | 3.30.1480.10 | Alpha Beta › 2-Layer Sandwich › N Utilization Substance Protein A; Chain:P; domain 4 › NusA, N-terminal domain | 0.50 | 33.0 | 2.80e-01 | 100.0% | 41.1% |
ECOD (38)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3786329 | 386.1.1.1 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-C2H2 | 0.71 | 54.0 | 4.83e-01 | 100.0% | 60.0% |
| 5040518 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.65 | 48.0 | 4.50e-01 | 100.0% | 88.0% |
| 5082053 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.65 | 48.0 | 2.93e-01 | 96.9% | 32.3% |
| 5038361 | 4294.1.1.13 ↗ | few secondary structure elements › Trm112p-like › Trm112p-like › Trm112p-like › Zn_ribbon_TFIIB | 0.65 | 47.0 | 4.52e-01 | 96.9% | 82.2% |
| 5078363 | 2003.1.5.19 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › TRM | 0.64 | 48.0 | 2.77e-01 | 96.9% | 9.0% |
| 4003595 | 101.1.9.4 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › Ski_Sno | 0.64 | 48.0 | 3.28e-01 | 87.5% | 21.7% |
| 5039125 | 375.1.1.83 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › zf-TFIIB | 0.63 | 45.0 | 4.02e-01 | 100.0% | 58.5% |
| 4987649 | 3110.1.1.0 ↗ | a/b three-layered sandwiches › STT3/PglB/AglB core domain › STT3/PglB/AglB core domain › STT3/PglB/AglB core domain | 0.62 | 44.0 | 2.78e-01 | 100.0% | 12.2% |
| 3218678 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.62 | 44.0 | 3.76e-01 | 81.2% | 40.0% |
| 3967950 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.62 | 43.0 | 3.95e-01 | 96.9% | 46.7% |
| 3982692 | 1001.1.1.4 ↗ | a+b two layers › Formate dehydrogenase/DMSO reductase, domain 1 › Formate dehydrogenase/DMSO reductase, domain 1 › Formate dehydrogenase/DMSO reductase, domain 1 › Molybdopterin_N | 0.61 | 42.0 | 3.68e-01 | 78.1% | 41.7% |
| 4026701 | 180.1.1.1 ↗ | alpha bundles › Acid phosphatase/Vanadium-dependent haloperoxidase › Acid phosphatase/Vanadium-dependent haloperoxidase › Acid phosphatase/Vanadium-dependent haloperoxidase › PAP2 | 0.61 | 45.0 | 2.88e-01 | 96.9% | 15.0% |
| 3898522 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.60 | 43.0 | 4.10e-01 | 100.0% | 72.0% |
| 4438733 | 4.1.1.178 ↗ | beta barrels › SH3 › SH3 › SH3 › ribosomal_L24 | 0.59 | 49.0 | 3.54e-01 | 100.0% | 30.5% |
| 4171942 | 4.1.1.178 ↗ | beta barrels › SH3 › SH3 › SH3 › ribosomal_L24 | 0.59 | 42.0 | 3.28e-01 | 100.0% | 63.5% |
| 3234330 | 330.1.1.1 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm | 0.59 | 41.0 | 3.13e-01 | 93.8% | 44.5% |
| 3625965 | 4184.1.1.2 ↗ | beta barrels › MFPT repeat › MFPT repeat › MFPT repeat › MFP2b | 0.59 | 45.0 | 3.43e-01 | 100.0% | 33.7% |
| 3636832 | 222.1.1.4 ↗ | a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase › 4HBT | 0.58 | 40.0 | 2.78e-01 | 100.0% | 67.4% |
| 3791839 | 4184.1.1.2 ↗ | beta barrels › MFPT repeat › MFPT repeat › MFPT repeat › MFP2b | 0.58 | 43.0 | 3.51e-01 | 100.0% | 40.0% |
| 3693330 | 511.1.1.2 ↗ | beta sandwiches › Heat shock protein 70kD (HSP70), peptide-binding domain › Heat shock protein 70kD (HSP70), peptide-binding domain › Heat shock protein 70kD (HSP70), peptide-binding domain › PF27034 | 0.58 | 42.0 | 2.97e-01 | 100.0% | 54.2% |
| 4992408 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.57 | 41.0 | 3.97e-01 | 93.8% | 80.0% |
| 3254253 | 4.1.1.7 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW,ribosomal_L24 | 0.57 | 45.0 | 2.98e-01 | 100.0% | 20.6% |
| 4989647 | 375.1.1.19 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › RNA_POL_M_15KD | 0.56 | 40.0 | 3.62e-01 | 100.0% | 50.9% |
| 5056316 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.54 | 39.0 | 2.34e-01 | 100.0% | 9.9% |
| 3066252 | 4032.1.1.1 ↗ | beta complex topology › barrel domains in phase 1 flagellin › barrel domains in phase 1 flagellin › barrel domains in phase 1 flagellin › Flagellin_IN | 0.54 | 37.0 | 2.83e-01 | 75.0% | 30.4% |
| 3680162 | 375.1.1.148 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › RPA_interact_C | 0.54 | 40.0 | 4.01e-01 | 90.6% | 100.0% |
| 2797622 | 2003.1.10.20 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › PreATP-grasp domain › ATPgraspMvdD | 0.54 | 39.0 | 2.86e-01 | 96.9% | 47.6% |
| 3520053 | 7590.1.1.3 ↗ | a/b three-layered sandwiches › Middle domain in Argonaute homologs › Middle domain in Argonaute homologs › Middle domain in Argonaute homologs › Piwi,ArgoMid | 0.53 | 39.0 | 2.59e-01 | 78.1% | 14.9% |
| 5045719 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.53 | 39.0 | 2.81e-01 | 81.2% | 21.0% |
| 3468311 | 109.4.1.1254 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, E_motif | 0.53 | 37.0 | 2.18e-01 | 87.5% | 7.4% |
| 3212138 | 145.1.1.1 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box | 0.53 | 39.0 | 3.32e-01 | 90.6% | 66.7% |
| 1685513 | 1001.1.1.4 ↗ | a+b two layers › Formate dehydrogenase/DMSO reductase, domain 1 › Formate dehydrogenase/DMSO reductase, domain 1 › Formate dehydrogenase/DMSO reductase, domain 1 › Molybdopterin_N | 0.53 | 37.0 | 3.45e-01 | 75.0% | 47.1% |
| 3207498 | 3409.1.1.3 ↗ | a+b duplicates or obligate multimers › Vacuolar protein sorting-associated protein 30 BARA domain › Vacuolar protein sorting-associated protein 30 BARA domain › Vacuolar protein sorting-associated protein 30 BARA domain › ATG14 | 0.53 | 36.0 | 2.17e-01 | 84.4% | 10.0% |
| 3454406 | 375.1.1.69 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › zinc_ribbon_12 | 0.52 | 36.0 | 3.51e-01 | 100.0% | 74.0% |
| 4887237 | 2484.1.1.2 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Actin | 0.51 | 35.0 | 2.60e-01 | 75.0% | 23.1% |
| 4016268 | 7590.1.1.2 ↗ | a/b three-layered sandwiches › Middle domain in Argonaute homologs › Middle domain in Argonaute homologs › Middle domain in Argonaute homologs › Piwi | 0.51 | 39.0 | 2.54e-01 | 78.1% | 14.1% |
| 3385478 | 7579.1.1.60 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › DUF2920 | 0.51 | 36.0 | 2.15e-01 | 96.9% | 52.8% |
| 2066842 | 2484.1.1.97 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Cas9_RuvC | 0.50 | 36.0 | 3.59e-01 | 81.2% | 79.4% |