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MW393850.1__QQM18175.1__CPT_Salva_011__00011

Bact-Vir

MW393850.1__QQM18175.1__CPT_Salva_011__00011

Identity

Accession:
MW393850 ↗
Kingdom:
phage

Quality

81.6 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Salvavirus› Stenotrophomonas_phage_Salva

TaxID: 2801524

Cluster

View cluster (4 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 7-80
PDB
Domain cluster: rep: ON146294.1__URG13002.1__B2_9__00009__D7-62
CATH (25)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
6c6sD02 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.72 47.0 5.10e-01 79.7% 81.7%
1nqnA00 2.40.128.30 Mainly Beta › Beta Barrel › Lipocalin › Avidin-like 0.63 47.0 4.11e-01 82.4% 94.9%
7k98B01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.62 44.0 3.88e-01 75.7% 85.1%
2kdsA01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.61 49.0 4.67e-01 100.0% 75.6%
2awnC02 2.40.50.100 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain 0.59 41.0 4.06e-01 71.6% 78.2%
1v1cA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.59 46.0 4.78e-01 83.8% 97.1%
4fpwB00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.59 41.0 3.19e-01 70.3% 44.7%
2egcA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.59 45.0 4.53e-01 82.4% 81.3%
6gbuD00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.58 45.0 4.77e-01 82.4% 96.9%
1wfwA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.58 45.0 4.55e-01 83.8% 87.8%
2rqtA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.58 44.0 4.78e-01 83.8% 98.4%
1gutA00 2.40.50.100 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain 0.57 36.0 3.73e-01 77.0% 68.7%
3kxyJ00 3.30.1460.10 Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › 0.57 40.0 3.34e-01 73.0% 69.0%
2wweA01 3.30.1520.10 Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain 0.57 40.0 3.57e-01 73.0% 79.8%
1zuyA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.57 42.0 4.63e-01 79.7% 100.0%
3p9vA00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.57 41.0 3.24e-01 77.0% 90.5%
2l9pA00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.56 42.0 3.31e-01 81.1% 76.2%
2xp1A01 3.30.505.10 Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain 0.56 39.0 3.60e-01 73.0% 75.8%
2xklA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.55 43.0 3.59e-01 91.9% 85.9%
1ci3M02 2.40.50.100 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain 0.55 37.0 4.00e-01 70.3% 94.8%
1reoA02 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.53 44.0 3.52e-01 91.9% 60.8%
6ro0F00 2.40.50.110 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.53 37.0 3.46e-01 74.3% 90.8%
1zo0A00 3.40.630.60 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › 0.53 38.0 3.24e-01 77.0% 58.7%
8axiA01 2.120.10.10 Mainly Beta › 6 Propeller › Neuraminidase › 0.52 45.0 2.92e-01 100.0% 45.7%
1vwxH02 3.90.930.12 Alpha Beta › Alpha-Beta Complex › Outer Surface Protein A; domain 3 › Ribosomal protein L6 0.50 34.0 3.11e-01 70.3% 87.4%
ECOD (50)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3978624 219.1.1.0 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases 0.72 49.0 4.08e-01 86.5% 40.8%
3706998 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.69 45.0 4.92e-01 85.1% 83.3%
3165403 4958.1.1.0 ↗ a+b complex topology › second helical domain in RNA-polymerase beta-prime subunit › second helical domain in RNA-polymerase beta-prime subunit › second helical domain in RNA-polymerase beta-prime subunit 0.65 40.0 4.23e-01 77.0% 70.8%
4107506 325.1.7.0 ↗ a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif 0.63 39.0 4.17e-01 77.0% 70.8%
4127839 325.1.7.0 ↗ a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif 0.63 39.0 3.93e-01 77.0% 61.3%
4159666 325.1.7.0 ↗ a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif 0.62 39.0 3.43e-01 78.4% 42.2%
2549179 243.19.1.0 ↗ a+b two layers › Cystatin-like › Phi ETA orf 56-like protein C-terminal domains › Phi ETA orf 56-like protein C-terminal domains 0.62 43.0 4.03e-01 71.6% 74.4%
4183857 325.1.7.30 ↗ a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif › Peptidase_M23 0.62 38.0 3.87e-01 77.0% 61.3%
3964664 2.4.1.0 ↗ beta barrels › OB-fold › MOP-like › MOP-like 0.61 40.0 4.21e-01 79.7% 73.5%
4028659 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.60 49.0 4.77e-01 86.5% 85.0%
4880118 2.4.1.1 ↗ beta barrels › OB-fold › MOP-like › MOP-like › TOBE 0.60 37.0 3.87e-01 77.0% 65.7%
4959167 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.60 40.0 4.19e-01 74.3% 76.9%
4483091 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.60 45.0 4.06e-01 81.1% 64.8%
3787441 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.59 45.0 4.23e-01 81.1% 67.8%
4456732 325.1.7.0 ↗ a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif 0.59 35.0 3.48e-01 100.0% 55.0%
3526953 4.1.1.54 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_2 0.59 44.0 4.75e-01 81.1% 93.7%
3482680 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.59 45.0 4.75e-01 82.4% 96.9%
4068978 325.1.7.0 ↗ a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif 0.59 37.0 3.74e-01 78.4% 62.7%
3566631 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.59 45.0 4.43e-01 82.4% 77.5%
3623785 4.1.1.54 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_2 0.59 44.0 4.46e-01 81.1% 81.3%
3936442 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.58 44.0 4.01e-01 81.1% 78.0%
5018537 5090.1.1.0 ↗ beta complex topology › Viral glycoprotein, central and dimerisation domains-like › Viral glycoprotein, central and dimerisation domains › Viral glycoprotein, central and dimerisation domains 0.58 42.0 3.85e-01 77.0% 83.0%
3482646 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.58 45.0 3.26e-01 82.4% 31.0%
3479042 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.58 42.0 4.38e-01 78.4% 84.3%
4683474 2.1.1.57 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › RecO_N 0.58 42.0 4.15e-01 78.4% 95.0%
4949965 3504.3.1.1 ↗ beta barrels › MutM N-terminal domain-like › Fibrinogen binding protein N-terminal domain › Fibrinogen binding protein N-terminal domain › NFACT_N 0.57 44.0 3.50e-01 83.8% 43.2%
3228340 4075.1.1.2 ↗ a+b complex topology › RGC domain › RGC domain › RGC domain › PF29130 0.57 42.0 3.87e-01 79.7% 90.0%
4218488 4.1.1.54 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_2 0.57 44.0 4.34e-01 83.8% 78.8%
3624228 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.57 42.0 4.24e-01 79.7% 96.0%
4119875 325.1.7.0 ↗ a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif 0.56 36.0 3.76e-01 78.4% 72.3%
3936225 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.56 43.0 4.41e-01 83.8% 87.1%
3969569 325.1.7.0 ↗ a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif 0.56 38.0 4.11e-01 70.3% 88.3%
3411613 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.56 41.0 2.62e-01 78.4% 26.0%
4349950 325.1.7.0 ↗ a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif 0.56 35.0 3.77e-01 77.0% 76.7%
4492087 325.1.7.3 ↗ a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif › Apocytochr_F_C 0.56 37.0 3.96e-01 70.3% 84.6%
4435672 325.1.7.0 ↗ a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif 0.56 35.0 3.70e-01 78.4% 72.3%
3707929 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.55 46.0 3.52e-01 90.5% 61.9%
4304579 325.1.7.0 ↗ a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif 0.55 37.0 3.92e-01 70.3% 87.7%
3620679 216.1.1.0 ↗ a+b two layers › UBC-like › UBC-like › UBC-like 0.54 37.0 2.89e-01 71.6% 51.9%
4077485 325.1.7.0 ↗ a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif 0.54 35.0 3.67e-01 78.4% 73.8%
4129953 325.1.7.3 ↗ a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif › Apocytochr_F_C 0.54 36.0 3.82e-01 70.3% 84.6%
4038412 325.1.7.0 ↗ a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif 0.54 33.0 3.50e-01 78.4% 69.2%
3427602 5.1.3.67 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_1 0.52 43.0 2.92e-01 94.6% 94.3%
4211209 325.1.7.0 ↗ a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif 0.52 35.0 3.70e-01 70.3% 83.1%
3298483 5.3.1.2 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-Prism II › beta-Prism II › B_lectin 0.52 45.0 3.72e-01 100.0% 54.3%
4977730 2.4.1.0 ↗ beta barrels › OB-fold › MOP-like › MOP-like 0.52 34.0 3.78e-01 75.7% 90.9%
3871253 220.1.1.122 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › C2_SHIP1-2_first 0.51 43.0 3.54e-01 94.6% 62.9%
4941310 3504.3.1.1 ↗ beta barrels › MutM N-terminal domain-like › Fibrinogen binding protein N-terminal domain › Fibrinogen binding protein N-terminal domain › NFACT_N 0.51 40.0 3.24e-01 95.9% 41.9%
5039311 3504.3.1.1 ↗ beta barrels › MutM N-terminal domain-like › Fibrinogen binding protein N-terminal domain › Fibrinogen binding protein N-terminal domain › NFACT_N 0.51 42.0 3.42e-01 93.2% 51.3%
4956661 3504.3.1.1 ↗ beta barrels › MutM N-terminal domain-like › Fibrinogen binding protein N-terminal domain › Fibrinogen binding protein N-terminal domain › NFACT_N 0.51 42.0 3.41e-01 91.9% 53.1%