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MW394389.1__QQV91699.1__vBKpPFBKp16_006__00006

Bact-Vir

MW394389.1__QQV91699.1__vBKpPFBKp16_006__00006

Identity

Accession:
MW394389 ↗
Kingdom:
phage

Quality

69.4 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Autographivirales› Autosignataviridae› Gansuvirus› Klebsiella_phage_vB_KpP_FBKp16

TaxID: 2801836

Cluster

View cluster (3 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 472-576
PDB
Domain cluster: rep: MN018232.1__QDH50655.1__X__00189__D210-318
CATH (50)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1qexA03 2.60.40.1680 Mainly Beta › Sandwich › Immunoglobulin-like › 4-oxalocrotonate tautomerase-like 0.76 70.0 6.84e-01 100.0% 92.1%
4n0rA01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.69 45.0 4.92e-01 95.2% 81.2%
2h6oA02 2.60.40.2810 Mainly Beta › Sandwich › Immunoglobulin-like › 0.69 63.0 5.50e-01 99.0% 84.5%
1yjdC00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.68 57.0 5.48e-01 100.0% 80.5%
4mz2A00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.67 55.0 5.40e-01 97.1% 82.9%
7mxdX01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.67 57.0 5.48e-01 100.0% 81.5%
2dleA01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.66 44.0 4.80e-01 100.0% 82.6%
4bd4A00 2.60.40.200 Mainly Beta › Sandwich › Immunoglobulin-like › Superoxide dismutase, copper/zinc binding domain 0.66 47.0 4.71e-01 74.3% 100.0%
2q7nA05 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.64 50.0 5.15e-01 100.0% 87.8%
4d6gA03 2.60.220.10 Mainly Beta › Sandwich › Chondroitinase Ac; Chain A, domain 3 › Polysaccharide lyase family 8-like, C-terminal 0.64 43.0 4.07e-01 100.0% 56.2%
2c4iA01 2.40.128.30 Mainly Beta › Beta Barrel › Lipocalin › Avidin-like 0.64 47.0 4.55e-01 77.1% 96.6%
3dzmB00 2.40.160.70 Mainly Beta › Beta Barrel › Porin › outer membrane protein from Thermus thermophilus HB27. 0.64 47.0 3.78e-01 77.1% 98.0%
3cu7A05 2.60.40.1930 Mainly Beta › Sandwich › Immunoglobulin-like › Macroglobulin (MG2) domain 0.63 47.0 4.74e-01 100.0% 77.4%
2ee2A01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.63 42.0 4.51e-01 99.0% 81.6%
7y8sB01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.63 42.0 4.55e-01 99.0% 82.8%
4z18A01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.63 53.0 5.24e-01 100.0% 87.7%
5mw5A01 2.60.40.3510 Mainly Beta › Sandwich › Immunoglobulin-like › 0.62 48.0 4.26e-01 81.9% 62.9%
2a74D01 2.60.40.1930 Mainly Beta › Sandwich › Immunoglobulin-like › Macroglobulin (MG2) domain 0.62 45.0 4.27e-01 100.0% 62.5%
7alkA01 2.60.40.3510 Mainly Beta › Sandwich › Immunoglobulin-like › 0.61 47.0 4.08e-01 81.9% 61.3%
4e1sA00 2.40.160.160 Mainly Beta › Beta Barrel › Porin › Inverse autotransporter, beta-domain 0.61 50.0 3.85e-01 89.5% 83.9%
2pndA00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.60 50.0 4.86e-01 100.0% 80.7%
1uynX00 2.40.128.130 Mainly Beta › Beta Barrel › Lipocalin › Autotransporter beta-domain 0.60 49.0 3.71e-01 92.4% 96.4%
4i9xA00 2.60.40.3790 Mainly Beta › Sandwich › Immunoglobulin-like › 0.59 52.0 4.40e-01 100.0% 56.1%
2gk6A02 2.40.30.230 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › 0.59 44.0 4.88e-01 99.0% 100.0%
1xt5A00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.58 52.0 4.83e-01 100.0% 80.0%
1ylnA01 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.58 37.0 3.65e-01 82.9% 59.6%
2hr0B02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.57 43.0 4.34e-01 100.0% 78.9%
4aw7A03 2.60.120.1200 Mainly Beta › Sandwich › Jelly Rolls › 0.56 50.0 4.77e-01 100.0% 89.3%
4es8B01 2.60.120.1240 Mainly Beta › Sandwich › Jelly Rolls › 0.55 50.0 4.06e-01 100.0% 96.4%
6wilA01 2.40.160.50 Mainly Beta › Beta Barrel › Porin › membrane protein fhac: a member of the omp85/tpsb transporter family 0.55 46.0 3.23e-01 92.4% 99.7%
1uisA00 2.40.155.10 Mainly Beta › Beta Barrel › Green Fluorescent Protein › Green fluorescent protein 0.55 45.0 3.55e-01 90.5% 54.9%
8ornD01 2.50.20.10 Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › Lipoprotein localisation LolA/LolB/LppX 0.54 41.0 3.49e-01 81.0% 91.5%
3tfzB00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.54 42.0 3.75e-01 86.7% 87.9%
2d4rA00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.54 43.0 3.89e-01 86.7% 91.1%
2zxqA04 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.54 49.0 4.24e-01 100.0% 95.6%
2c9jA00 2.40.155.10 Mainly Beta › Beta Barrel › Green Fluorescent Protein › Green fluorescent protein 0.53 44.0 3.52e-01 90.5% 58.2%
2pslA00 2.40.155.10 Mainly Beta › Beta Barrel › Green Fluorescent Protein › Green fluorescent protein 0.53 44.0 3.50e-01 90.5% 57.1%
2q1fA01 2.60.120.430 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding lectin 0.53 47.0 4.08e-01 100.0% 88.0%
4xrtA01 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.53 41.0 3.74e-01 82.9% 64.1%
2zylA02 3.90.380.10 Alpha Beta › Alpha-Beta Complex › Naphthalene 1,2-dioxygenase Alpha Subunit; Chain A, domain 1 › Naphthalene 1,2-dioxygenase Alpha Subunit; Chain A, domain 1 0.53 41.0 3.25e-01 81.9% 57.6%
4p02B01 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.53 47.0 4.37e-01 100.0% 96.2%
3winE03 2.60.120.1090 Mainly Beta › Sandwich › Jelly Rolls › 0.52 46.0 4.56e-01 100.0% 96.4%
6ka3A01 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.52 40.0 3.65e-01 83.8% 91.2%
2p4bB02 3.30.200.100 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › MucB/RseB, C-terminal domain 0.52 36.0 3.76e-01 73.3% 98.0%
8t5tA01 2.50.20.10 Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › Lipoprotein localisation LolA/LolB/LppX 0.52 39.0 3.26e-01 81.0% 84.9%
3zxfA00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.51 46.0 4.23e-01 100.0% 92.6%
2vrsA03 2.60.90.40 Mainly Beta › Sandwich › Adenovirus Type 5 Fiber Protein (Receptor Binding Domain) › 0.51 42.0 3.98e-01 100.0% 73.5%
5tr9A01 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.51 40.0 4.18e-01 100.0% 93.8%
1y60A00 3.30.230.60 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S5; domain 2 › Formaldehyde-activating enzyme 0.50 37.0 3.27e-01 79.0% 88.1%
3mepA00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.50 44.0 3.75e-01 100.0% 91.1%
ECOD (53)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
2581320 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.76 70.0 6.59e-01 100.0% 92.0%
441034 3386.1.1.4 ↗ beta sandwiches › gp9 C-terminal domain-like › gp9 C-terminal domain-related › gp9 C-terminal domain-related › T4_gp9_10_C 0.76 70.0 6.71e-01 100.0% 87.5%
3906165 11.1.1.2 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › fn3 0.69 45.0 4.85e-01 100.0% 77.8%
3406855 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.65 45.0 4.78e-01 100.0% 82.2%
4982344 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.64 44.0 4.85e-01 100.0% 88.2%
5068228 10.1.2.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.63 52.0 5.29e-01 100.0% 89.5%
4881486 11.1.1.220 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › UL141 0.63 56.0 4.39e-01 100.0% 47.1%
3885658 11.1.1.126 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › IL4Ra_N 0.62 44.0 4.61e-01 100.0% 81.1%
2771050 11.2.1.6 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › MNNL 0.61 46.0 4.06e-01 80.0% 60.3%
5012403 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.61 55.0 4.75e-01 100.0% 77.0%
3551607 11.1.1.283 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › IL2RB_N1 0.61 45.0 4.52e-01 99.0% 77.1%
5036836 71.1.1.0 ↗ beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB 0.60 46.0 3.60e-01 81.0% 86.5%
3546952 11.2.1.6 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › MNNL 0.60 45.0 4.02e-01 79.0% 64.0%
3926427 11.1.1.53 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › DOMON 0.59 52.0 4.59e-01 100.0% 75.6%
3744032 11.1.5.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f 0.59 53.0 4.75e-01 100.0% 75.2%
3832653 331.3.1.1 ↗ a+b two layers › TBP-like › Bet v1-like › Bet v1-like › Bet_v_1 0.58 48.0 4.26e-01 90.5% 91.0%
5039646 10.1.2.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.58 52.0 4.97e-01 100.0% 86.7%
4512746 5084.1.1.9 ↗ beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › PagL 0.58 51.0 4.51e-01 99.0% 93.0%
None — 0.58 44.0 3.69e-01 81.0% 88.9%
3795098 11.1.1.53 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › DOMON 0.57 51.0 4.47e-01 100.0% 73.8%
3222982 11.1.1.53 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › DOMON 0.57 50.0 4.54e-01 100.0% 79.3%
3996785 11.1.1.53 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › DOMON 0.57 50.0 4.43e-01 100.0% 75.6%
4979173 10.1.2.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.57 47.0 4.75e-01 100.0% 91.4%
5012521 71.1.1.0 ↗ beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB 0.56 43.0 3.38e-01 82.9% 96.2%
3849839 4210.1.1.0 ↗ a+b two layers › WGR domain › WGR domain › WGR domain 0.56 40.0 4.15e-01 75.2% 98.0%
5076916 4252.1.1.0 ↗ beta barrels › AttH-like › AttH-like › AttH-like 0.55 40.0 3.71e-01 75.2% 91.8%
5064593 10.1.2.181 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) › CBM_4_9 0.55 48.0 4.50e-01 97.1% 82.3%
4382844 10.32.1.0 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.55 48.0 4.52e-01 100.0% 78.5%
4052154 71.1.1.3 ↗ beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › LolB 0.55 42.0 3.56e-01 80.0% 90.6%
3478979 11.10.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › TRAF domain-like › TRAF domain-like 0.55 50.0 4.66e-01 100.0% 91.5%
3607434 10.1.1.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases 0.55 46.0 4.27e-01 93.3% 91.1%
3222541 4252.1.1.15 ↗ beta barrels › AttH-like › AttH-like › AttH-like › PF30558 0.55 41.0 3.29e-01 81.0% 89.8%
3373176 3459.1.1.3 ↗ beta sandwiches › Fas apoptotic inhibitory molecule › Fas apoptotic inhibitory molecule › Fas apoptotic inhibitory molecule › DUF868 0.55 40.0 3.72e-01 78.1% 96.4%
3581433 10.2.1.39 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Cu2_monoox_C 0.54 48.0 3.97e-01 100.0% 61.0%
3342352 10.32.1.210 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › GOLD_PATL1_C 0.54 46.0 4.58e-01 100.0% 90.0%
5014023 71.1.1.0 ↗ beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB 0.54 42.0 3.47e-01 81.9% 88.6%
3300834 10.32.1.210 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › GOLD_PATL1_C 0.54 46.0 4.47e-01 100.0% 86.1%
3638672 11.10.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › TRAF domain-like › TRAF domain-like 0.54 49.0 4.35e-01 100.0% 85.9%
3057477 220.1.1.146 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_NDK7_N 0.54 36.0 3.86e-01 77.1% 80.2%
3387846 1.1.7.10 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › Flavokinase 0.54 42.0 4.03e-01 100.0% 73.3%
4983955 12.1.1.0 ↗ beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain 0.53 38.0 3.93e-01 90.5% 81.1%
3244054 11.1.1.70 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Bile_Hydr_Trans 0.53 47.0 4.55e-01 100.0% 90.0%
5015520 71.1.1.0 ↗ beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB 0.53 40.0 3.22e-01 81.0% 89.0%
3543667 11.1.1.53 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › DOMON 0.53 46.0 3.97e-01 100.0% 65.1%
3213674 11.1.1.70 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Bile_Hydr_Trans 0.52 46.0 4.47e-01 100.0% 88.3%
3417166 10.1.1.34 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › DUF3472 0.52 45.0 3.65e-01 100.0% 70.7%
3196339 1.1.7.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.52 43.0 4.03e-01 100.0% 72.3%
3227968 11.1.1.260 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › TIG_2 0.52 44.0 4.35e-01 100.0% 86.1%
3827447 844.1.1.2 ↗ beta barrels › Transcriptional factor tubby, C-terminal domain › Transcriptional factor tubby, C-terminal domain › Transcriptional factor tubby, C-terminal domain › LOR 0.52 44.0 3.66e-01 95.2% 97.4%
3943954 12.3.1.3 ↗ beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › Aldose_epim 0.51 43.0 3.24e-01 94.3% 87.6%
3328172 10.1.1.12 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Glyco_hydro_16,XET_C 0.51 44.0 3.33e-01 100.0% 68.9%
4019025 10.1.1.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases 0.51 44.0 3.98e-01 98.1% 88.7%
3810972 10.1.1.12 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Glyco_hydro_16,XET_C 0.50 43.0 3.42e-01 100.0% 73.9%
D2 medium residues 15-162
PDB
Domain cluster: rep: CG_2015-01t_scaffold_2_prodigal-single.1__X__X__00328__D166-268_372-421
CATH (4)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3gq8A01 2.160.20.10 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like 0.79 62.0 4.22e-01 100.0% 25.6%
2pygA00 2.160.20.10 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like 0.71 60.0 4.32e-01 87.2% 45.5%
1y7lA02 3.40.50.1100 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.52 28.0 3.20e-01 95.3% 69.9%
4l6wB01 3.90.226.10 Alpha Beta › Alpha-Beta Complex › 2-enoyl-CoA Hydratase; Chain A, domain 1 › 2-enoyl-CoA Hydratase; Chain A, domain 1 0.51 40.0 3.82e-01 90.5% 70.1%
ECOD (15)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
364252 207.2.1.20 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Pectate_lyase_3 0.79 62.0 4.23e-01 100.0% 25.7%
4539832 207.2.1.0 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like 0.79 57.0 4.38e-01 86.5% 34.9%
2546335 207.2.1.32 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › CatAgl_D2 0.71 62.0 4.39e-01 91.2% 42.3%
3195366 207.2.1.20 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Pectate_lyase_3 0.70 60.0 4.27e-01 89.2% 52.8%
3206059 207.2.1.20 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Pectate_lyase_3 0.69 60.0 4.25e-01 89.2% 53.2%
4856184 207.2.1.20 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Pectate_lyase_3 0.69 59.0 4.30e-01 89.2% 54.6%
4104747 207.2.1.20 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Pectate_lyase_3 0.69 57.0 3.98e-01 88.5% 30.6%
397790 207.2.1.20 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Pectate_lyase_3 0.67 57.0 3.90e-01 87.8% 30.5%
4424225 207.2.1.0 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like 0.67 57.0 3.91e-01 88.5% 30.4%
2491360 207.2.1.22 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Beta_helix 0.63 60.0 4.20e-01 100.0% 51.9%
4943042 207.2.1.1 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Glyco_hydro_28 0.53 48.0 3.35e-01 100.0% 56.2%
3870521 207.14.1.0 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Bactofilin A › Bactofilin A 0.51 28.0 3.56e-01 82.4% 100.0%
2581319 207.2.1.0 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like 0.51 46.0 3.50e-01 100.0% 52.3%
3586852 207.2.1.1 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Glyco_hydro_28 0.50 44.0 3.22e-01 98.0% 69.1%
3381592 2486.1.1.6 ↗ a/b three-layered sandwiches › ClpP/crotonase › ClpP/crotonase › ClpP/crotonase › ACCA 0.50 44.0 3.43e-01 97.3% 73.7%
D3 medium residues 163-343
PDB
Domain cluster: representative
CATH (35)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2vjiA02 2.160.20.10 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like 0.78 74.0 5.44e-01 100.0% 55.2%
3n6zA01 2.160.20.110 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › 0.77 72.0 6.21e-01 97.8% 91.3%
3vsvA01 2.160.20.10 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like 0.77 71.0 5.01e-01 97.8% 45.3%
2uvfB02 2.160.20.10 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like 0.76 73.0 5.25e-01 100.0% 66.5%
7chuA01 2.160.20.10 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like 0.76 71.0 5.53e-01 100.0% 49.7%
1ee6A00 2.160.20.10 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like 0.75 63.0 6.12e-01 100.0% 79.7%
4c2lA00 2.160.20.10 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like 0.75 71.0 5.48e-01 100.0% 52.4%
3jurA00 2.160.20.10 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like 0.75 71.0 5.20e-01 100.0% 62.2%
5jlvC00 2.160.20.80 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › E3 ubiquitin-protein ligase SopA 0.75 41.0 5.52e-01 86.7% 100.0%
5gkqB01 2.160.20.10 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like 0.74 70.0 5.27e-01 99.4% 57.1%
1idjA00 2.160.20.10 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like 0.74 70.0 5.45e-01 100.0% 60.7%
3riqA00 2.160.20.20 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › 0.74 69.0 4.83e-01 100.0% 56.7%
1clwA00 2.160.20.20 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › 0.73 69.0 4.80e-01 100.0% 59.3%
7o7aA01 2.160.20.10 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like 0.73 69.0 5.21e-01 99.4% 55.9%
1rmgA00 2.160.20.10 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like 0.73 69.0 5.12e-01 100.0% 44.8%
8tmsA01 2.160.20.10 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like 0.73 69.0 5.85e-01 100.0% 83.9%
6kqsA01 2.160.20.10 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like 0.72 68.0 5.06e-01 100.0% 60.0%
5gkdA02 2.160.20.10 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like 0.72 68.0 5.73e-01 100.0% 68.8%
1ogoX02 2.160.20.10 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like 0.72 68.0 5.27e-01 100.0% 64.0%
1pxzA00 2.160.20.10 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like 0.71 67.0 5.29e-01 99.4% 56.4%
1jtaA00 2.160.20.10 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like 0.71 67.0 5.19e-01 99.4% 56.5%
1x0cA02 2.160.20.10 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like 0.70 66.0 5.08e-01 99.4% 70.1%
1k5cA00 2.160.20.10 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like 0.70 66.0 5.30e-01 100.0% 73.6%
4mxnB00 2.160.20.10 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like 0.69 64.0 5.89e-01 98.3% 92.0%
1qjvA00 2.160.20.10 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like 0.68 63.0 4.99e-01 97.2% 64.9%
3b4nA02 2.160.20.10 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like 0.67 63.0 5.84e-01 100.0% 86.3%
3p4gD00 2.160.20.160 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › 0.67 54.0 4.47e-01 100.0% 48.7%
1k4zA00 2.160.20.70 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › 0.66 48.0 5.11e-01 96.7% 85.4%
3nb2A01 2.160.20.80 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › E3 ubiquitin-protein ligase SopA 0.66 52.0 5.25e-01 100.0% 83.1%
3ak5D02 2.160.20.20 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › 0.66 61.0 4.06e-01 100.0% 31.1%
4i84A00 2.160.20.10 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like 0.65 60.0 5.10e-01 100.0% 81.4%
1k8fA00 2.160.20.70 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › 0.64 51.0 5.42e-01 98.3% 94.3%
1rwrA00 2.160.20.10 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like 0.64 59.0 4.98e-01 99.4% 67.0%
2yuhA01 2.160.20.70 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › 0.64 52.0 5.40e-01 99.4% 90.7%
4kh3A00 2.160.20.20 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › 0.56 52.0 3.75e-01 100.0% 37.2%
ECOD (47)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5062061 207.2.1.13 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › NosD 0.84 68.0 6.09e-01 94.5% 62.5%
3963707 207.14.1.0 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Bactofilin A › Bactofilin A 0.80 37.0 5.50e-01 87.3% 100.0%
1720156 207.14.1.1 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Bactofilin A › Bactofilin A › Bactofilin 0.77 45.0 5.78e-01 90.6% 100.0%
4949579 207.2.1.0 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like 0.77 73.0 5.14e-01 99.4% 48.8%
3254891 207.6.1.8 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Serralysin-like metalloprotease-C › Serralysin-like metalloprotease-C › Nucleoporin_FG 0.77 51.0 5.85e-01 98.3% 90.4%
3591496 207.2.1.22 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Beta_helix 0.76 66.0 4.80e-01 99.4% 36.5%
4026564 208.1.1.0 ↗ beta duplicates or obligate multimers › Single-stranded left-handed beta-helix › Trimeric LpxA-like enzymes › Trimeric LpxA-like enzymes 0.76 50.0 4.87e-01 98.3% 61.0%
4888693 207.4.1.1 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › C-CAP/cofactor C-like › C-CAP/cofactor C-like › TBCC 0.75 44.0 5.18e-01 84.5% 80.8%
3758283 207.6.1.0 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Serralysin-like metalloprotease-C › Serralysin-like metalloprotease-C 0.75 61.0 6.19e-01 98.3% 86.3%
3744798 208.1.1.43 ↗ beta duplicates or obligate multimers › Single-stranded left-handed beta-helix › Trimeric LpxA-like enzymes › Trimeric LpxA-like enzymes › DUF1720 0.74 44.0 4.86e-01 98.3% 70.7%
3546698 207.6.1.0 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Serralysin-like metalloprotease-C › Serralysin-like metalloprotease-C 0.73 55.0 5.86e-01 99.4% 88.7%
3787858 207.9.1.0 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pentapeptide repeats › Pentapeptide repeats 0.73 45.0 4.95e-01 97.2% 74.7%
3713775 207.2.1.22 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Beta_helix 0.69 66.0 5.05e-01 100.0% 67.7%
4971789 208.1.1.0 ↗ beta duplicates or obligate multimers › Single-stranded left-handed beta-helix › Trimeric LpxA-like enzymes › Trimeric LpxA-like enzymes 0.69 48.0 5.58e-01 97.2% 97.7%
3577699 207.4.1.1 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › C-CAP/cofactor C-like › C-CAP/cofactor C-like › TBCC 0.69 52.0 5.69e-01 97.8% 94.0%
4002541 207.4.1.1 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › C-CAP/cofactor C-like › C-CAP/cofactor C-like › TBCC 0.68 52.0 5.56e-01 98.9% 90.0%
3596944 208.1.1.0 ↗ beta duplicates or obligate multimers › Single-stranded left-handed beta-helix › Trimeric LpxA-like enzymes › Trimeric LpxA-like enzymes 0.68 41.0 4.43e-01 97.2% 69.0%
3627892 207.14.1.0 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Bactofilin A › Bactofilin A 0.67 54.0 5.15e-01 98.3% 73.7%
3708824 207.2.1.22 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Beta_helix 0.67 60.0 5.04e-01 98.3% 57.9%
3531139 207.6.1.26 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Serralysin-like metalloprotease-C › Serralysin-like metalloprotease-C › MUC20 0.66 50.0 4.64e-01 98.3% 62.7%
3345005 207.4.1.1 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › C-CAP/cofactor C-like › C-CAP/cofactor C-like › TBCC 0.65 52.0 5.44e-01 97.2% 90.9%
3903674 207.2.1.0 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like 0.65 46.0 4.22e-01 98.3% 57.0%
3492291 207.4.1.2 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › C-CAP/cofactor C-like › C-CAP/cofactor C-like › CAP_C 0.64 50.0 5.26e-01 97.2% 89.6%
3560250 208.2.1.7 ↗ beta duplicates or obligate multimers › Single-stranded left-handed beta-helix › Adhesin YadA, collagen-binding domain › Adhesin YadA, collagen-binding domain › Epiglycanin_TR 0.64 41.0 4.50e-01 99.4% 79.3%
3708794 207.4.1.2 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › C-CAP/cofactor C-like › C-CAP/cofactor C-like › CAP_C 0.63 49.0 5.03e-01 97.8% 84.6%
3904571 207.6.1.0 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Serralysin-like metalloprotease-C › Serralysin-like metalloprotease-C 0.63 56.0 4.83e-01 100.0% 61.4%
3498904 207.4.1.1 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › C-CAP/cofactor C-like › C-CAP/cofactor C-like › TBCC 0.63 55.0 4.63e-01 100.0% 56.4%
3937756 207.6.1.0 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Serralysin-like metalloprotease-C › Serralysin-like metalloprotease-C 0.63 49.0 4.45e-01 97.8% 61.7%
5058080 207.8.1.1 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Stabilizer of iron transporter sufD › Stabilizer of iron transporter sufD › SUFBD 0.62 58.0 4.46e-01 100.0% 70.7%
3355383 207.8.1.1 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Stabilizer of iron transporter sufD › Stabilizer of iron transporter sufD › SUFBD 0.62 58.0 4.89e-01 100.0% 68.6%
4567319 207.8.1.1 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Stabilizer of iron transporter sufD › Stabilizer of iron transporter sufD › SUFBD 0.62 57.0 4.27e-01 100.0% 74.9%
5059814 207.8.1.1 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Stabilizer of iron transporter sufD › Stabilizer of iron transporter sufD › SUFBD 0.62 56.0 4.45e-01 100.0% 56.0%
3708312 208.2.1.0 ↗ beta duplicates or obligate multimers › Single-stranded left-handed beta-helix › Adhesin YadA, collagen-binding domain › Adhesin YadA, collagen-binding domain 0.61 55.0 5.02e-01 99.4% 73.8%
3961601 207.8.1.2 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Stabilizer of iron transporter sufD › Stabilizer of iron transporter sufD › SUFBD,SufBD_N 0.60 55.0 4.14e-01 99.4% 55.0%
3605595 207.6.1.0 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Serralysin-like metalloprotease-C › Serralysin-like metalloprotease-C 0.60 35.0 3.51e-01 99.4% 57.2%
3869345 207.6.1.0 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Serralysin-like metalloprotease-C › Serralysin-like metalloprotease-C 0.59 55.0 5.10e-01 100.0% 95.6%
5010532 207.8.1.1 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Stabilizer of iron transporter sufD › Stabilizer of iron transporter sufD › SUFBD 0.59 54.0 4.28e-01 100.0% 50.1%
4371237 207.6.1.1 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Serralysin-like metalloprotease-C › Serralysin-like metalloprotease-C › HemolysinCabind 0.59 54.0 4.75e-01 100.0% 70.9%
3614748 207.4.1.1 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › C-CAP/cofactor C-like › C-CAP/cofactor C-like › TBCC 0.59 55.0 4.93e-01 100.0% 78.4%
2429370 207.13.1.0 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix 0.59 53.0 4.20e-01 98.3% 49.3%
3567623 208.7.1.5 ↗ beta duplicates or obligate multimers › Single-stranded left-handed beta-helix › Grass antifreeze protein › Grass antifreeze protein › Epiglycanin_TR 0.59 41.0 4.36e-01 97.2% 80.6%
3855439 207.8.1.0 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Stabilizer of iron transporter sufD › Stabilizer of iron transporter sufD 0.57 52.0 4.49e-01 100.0% 75.1%
3246091 389.1.1.157 ↗ few secondary structure elements › EGF-like › EGF-related › EGF/Laminin › Epiglycanin_TR 0.57 50.0 5.08e-01 93.4% 98.9%
1141999 207.2.1.25 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › AIDA 0.56 52.0 3.75e-01 100.0% 37.2%
3987739 207.4.1.6 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › C-CAP/cofactor C-like › C-CAP/cofactor C-like › CFSR 0.53 49.0 4.43e-01 99.4% 90.4%
3454749 207.4.1.1 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › C-CAP/cofactor C-like › C-CAP/cofactor C-like › TBCC 0.52 48.0 4.52e-01 99.4% 87.9%
3175357 207.6.1.0 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Serralysin-like metalloprotease-C › Serralysin-like metalloprotease-C 0.52 39.0 4.29e-01 96.7% 97.2%
D4 medium residues 383-435
PDB