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MW394390.1__QQV91861.1__vBKpMFBKp34_030__00030
Bact-VirMW394390.1__QQV91861.1__vBKpMFBKp34_030__00030
Identity
- Accession:
- MW394390 ↗
- Kingdom:
- phage
Quality
90.7
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 19-124
Domain cluster:
representative
CATH (16)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4kwyA00 | 3.30.160.150 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Lipoprotein like domain | 0.74 | 51.0 | 4.63e-01 | 70.8% | 81.0% |
| 2iqiB00 | 3.40.50.10610 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › ABC-type transport auxiliary lipoprotein component | 0.67 | 53.0 | 4.49e-01 | 84.0% | 93.0% |
| 3ecrB03 | 3.30.160.40 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Porphobilinogen deaminase, C-terminal domain | 0.63 | 44.0 | 4.49e-01 | 71.7% | 86.3% |
| 4ojdH01 | 2.60.98.60 | Mainly Beta › Sandwich › Tick-borne Encephalitis virus Glycoprotein; domain 1 › Cell-cell fusogen EFF/AFF, domain 1 | 0.61 | 45.0 | 3.91e-01 | 78.3% | 56.7% |
| 3natA01 | 3.40.50.11250 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Protein of unknown function DUF3013 | 0.58 | 41.0 | 3.65e-01 | 71.7% | 68.0% |
| 2ihmB03 | 3.30.460.10 | Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › Beta Polymerase, domain 2 | 0.58 | 38.0 | 3.77e-01 | 83.0% | 62.3% |
| 3oguA03 | 3.30.460.10 | Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › Beta Polymerase, domain 2 | 0.56 | 37.0 | 3.57e-01 | 84.0% | 58.5% |
| 1aq3A00 | 3.30.380.10 | Alpha Beta › 2-Layer Sandwich › MS2 Viral Coat Protein › MS2 Viral Coat Protein | 0.56 | 39.0 | 3.69e-01 | 72.6% | 95.3% |
| 4q05A00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.55 | 39.0 | 2.78e-01 | 73.6% | 80.1% |
| 2yfsA01 | 2.115.10.20 | Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 | 0.55 | 47.0 | 3.17e-01 | 100.0% | 83.9% |
| 3d9rB00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.53 | 39.0 | 3.69e-01 | 78.3% | 71.4% |
| 1vgyA01 | 3.40.630.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Zn peptidases | 0.52 | 42.0 | 3.22e-01 | 88.7% | 100.0% |
| 4afkA00 | 2.40.160.100 | Mainly Beta › Beta Barrel › Porin › | 0.52 | 41.0 | 2.84e-01 | 87.7% | 95.8% |
| 1e54A00 | 2.40.160.10 | Mainly Beta › Beta Barrel › Porin › Porin | 0.52 | 40.0 | 2.92e-01 | 84.0% | 96.4% |
| 4pibA00 | 2.60.40.3910 | Mainly Beta › Sandwich › Immunoglobulin-like › Inclusion body protein | 0.50 | 40.0 | 3.39e-01 | 84.9% | 83.3% |
| 4f8lA00 | 2.60.40.3590 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.50 | 40.0 | 3.63e-01 | 84.0% | 93.5% |
ECOD (22)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4973090 | 330.2.1.0 ↗ | a+b two layers › dsRBD-like › Ribosome binding protein Y (YfiA homologue) › Ribosome binding protein Y (YfiA homologue) | 0.72 | 50.0 | 5.20e-01 | 71.7% | 89.0% |
| 5023930 | 330.1.1.0 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like | 0.63 | 45.0 | 4.95e-01 | 94.3% | 92.9% |
| 3244569 | 330.1.1.1 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm | 0.58 | 43.0 | 4.72e-01 | 82.1% | 97.6% |
| 3624927 | 330.1.1.1 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm | 0.57 | 43.0 | 4.34e-01 | 82.1% | 80.0% |
| 3461988 | 5.1.3.54 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › DUF1668 | 0.56 | 44.0 | 3.18e-01 | 86.8% | 98.0% |
| 3503920 | 5090.1.1.8 ↗ | beta complex topology › Viral glycoprotein, central and dimerisation domains-like › Viral glycoprotein, central and dimerisation domains › Viral glycoprotein, central and dimerisation domains › EFF-AFF | 0.56 | 41.0 | 2.89e-01 | 78.3% | 94.6% |
| 4188870 | 5084.5.1.10 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Porin › MDM10 | 0.55 | 41.0 | 2.89e-01 | 80.2% | 99.5% |
| 3600840 | 330.1.1.0 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like | 0.54 | 46.0 | 4.74e-01 | 93.4% | 98.0% |
| 3516108 | 2004.1.1.250 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Kinesin,Microtub_bd | 0.54 | 45.0 | 3.07e-01 | 92.5% | 90.2% |
| 3741960 | 5.1.4.242 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › PEP5_VPS11_N | 0.52 | 41.0 | 2.96e-01 | 85.8% | 100.0% |
| 4969719 | 4272.1.1.1 ↗ | a+b two layers › Nqo5-like › Nqo5-like › Nqo5-like › Complex1_30kDa | 0.52 | 37.0 | 3.34e-01 | 85.8% | 52.7% |
| 3582030 | 2007.2.3.21 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › (Phosphotyrosine protein) phosphatases II › Y_phosphatase, PTP-SAK | 0.52 | 44.0 | 3.10e-01 | 90.6% | 36.1% |
| 3805924 | 9.1.1.0 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins | 0.52 | 43.0 | 3.59e-01 | 90.6% | 83.2% |
| 4238279 | 2.1.1.6 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › SSB | 0.52 | 37.0 | 3.68e-01 | 75.5% | 84.3% |
| 3607862 | 330.1.1.0 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like | 0.51 | 40.0 | 4.25e-01 | 84.0% | 97.9% |
| 3522230 | 11.1.1.38 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Big_2 | 0.51 | 38.0 | 4.14e-01 | 84.0% | 93.3% |
| 2658958 | 265.1.1.1 ↗ | a+b two layers › RNA bacteriophage capsid protein › RNA bacteriophage capsid protein › RNA bacteriophage capsid protein › Levi_coat | 0.51 | 35.0 | 3.34e-01 | 70.8% | 94.4% |
| 3426315 | 274.1.1.0 ↗ | a+b two layers › Pili subunits › Pili subunits › Pili subunits | 0.51 | 36.0 | 3.95e-01 | 83.0% | 87.8% |
| 3520621 | 2007.2.3.1 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › (Phosphotyrosine protein) phosphatases II › Y_phosphatase | 0.51 | 43.0 | 3.20e-01 | 93.4% | 40.7% |
| 3718042 | 5.1.3.28 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › BNR_3 | 0.50 | 44.0 | 2.99e-01 | 100.0% | 91.6% |
| 3170704 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.50 | 43.0 | 3.01e-01 | 100.0% | 92.9% |
| 5013600 | 512.1.1.2 ↗ | a+b two layers › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › PmbA_TldD_2nd | 0.50 | 42.0 | 4.00e-01 | 94.3% | 83.8% |