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MW394390.1__QQV91962.1__vBKpMFBKp34_042__00042

Bact-Vir

MW394390.1__QQV91962.1__vBKpMFBKp34_042__00042

Identity

Accession:
MW394390 ↗
Kingdom:
phage

Quality

88.7 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 2-60
PDB
CATH (56)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1zpsA01 3.10.20.810 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphoribosyl-AMP cyclohydrolase 0.79 72.0 6.06e-01 100.0% 81.1%
6scxA02 3.90.79.10 Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase 0.72 63.0 4.86e-01 100.0% 63.7%
2d3aA01 3.10.20.70 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Glutamine synthetase, N-terminal domain 0.71 62.0 5.22e-01 98.3% 78.2%
3gwyB00 3.90.79.10 Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase 0.70 60.0 4.72e-01 100.0% 68.4%
1vhzA01 3.90.79.10 Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase 0.69 60.0 4.33e-01 100.0% 50.0%
2b0vA00 3.90.79.10 Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase 0.69 60.0 4.54e-01 100.0% 59.5%
3mcfA00 3.90.79.10 Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase 0.69 59.0 4.67e-01 100.0% 62.3%
3gg6A00 3.90.79.10 Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase 0.68 59.0 4.50e-01 100.0% 59.0%
1qs1A01 3.90.176.10 Alpha Beta › Alpha-Beta Complex › Toxin ADP-ribosyltransferase; Chain A, domain 1 › Toxin ADP-ribosyltransferase; Chain A, domain 1 0.67 52.0 3.60e-01 84.7% 60.6%
3h95A01 3.90.79.10 Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase 0.67 58.0 4.55e-01 100.0% 64.9%
4xzjA01 3.90.176.10 Alpha Beta › Alpha-Beta Complex › Toxin ADP-ribosyltransferase; Chain A, domain 1 › Toxin ADP-ribosyltransferase; Chain A, domain 1 0.67 52.0 3.58e-01 86.4% 51.7%
2azwA00 3.90.79.10 Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase 0.66 56.0 4.32e-01 100.0% 62.3%
1yqyA01 3.90.176.10 Alpha Beta › Alpha-Beta Complex › Toxin ADP-ribosyltransferase; Chain A, domain 1 › Toxin ADP-ribosyltransferase; Chain A, domain 1 0.66 51.0 3.56e-01 86.4% 58.3%
1qtqA01 2.40.240.10 Mainly Beta › Beta Barrel › Ribosomal Protein L25; Chain P › Ribosomal Protein L25; Chain P 0.65 54.0 4.60e-01 98.3% 88.8%
4xsgB00 3.90.176.10 Alpha Beta › Alpha-Beta Complex › Toxin ADP-ribosyltransferase; Chain A, domain 1 › Toxin ADP-ribosyltransferase; Chain A, domain 1 0.65 46.0 3.23e-01 76.3% 100.0%
1ze3D00 3.10.20.410 Alpha Beta › Roll › Ubiquitin-like (UB roll) › PapC, N-terminal domain 0.65 57.0 4.62e-01 100.0% 75.9%
1gzeA00 3.90.176.10 Alpha Beta › Alpha-Beta Complex › Toxin ADP-ribosyltransferase; Chain A, domain 1 › Toxin ADP-ribosyltransferase; Chain A, domain 1 0.65 51.0 3.59e-01 88.1% 98.1%
1ktgA00 3.90.79.10 Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase 0.64 55.0 4.29e-01 100.0% 68.6%
4b0eD00 3.10.20.410 Alpha Beta › Roll › Ubiquitin-like (UB roll) › PapC, N-terminal domain 0.64 56.0 4.75e-01 100.0% 84.0%
3cngC02 3.90.79.10 Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase 0.64 53.0 4.17e-01 100.0% 59.4%
1qs1A02 3.90.176.10 Alpha Beta › Alpha-Beta Complex › Toxin ADP-ribosyltransferase; Chain A, domain 1 › Toxin ADP-ribosyltransferase; Chain A, domain 1 0.64 49.0 3.47e-01 84.7% 59.9%
3rh7A02 3.90.79.10 Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase 0.64 54.0 4.32e-01 100.0% 62.0%
1se9A00 3.10.20.90 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 0.63 54.0 4.58e-01 96.6% 86.1%
6k93A00 3.90.176.10 Alpha Beta › Alpha-Beta Complex › Toxin ADP-ribosyltransferase; Chain A, domain 1 › Toxin ADP-ribosyltransferase; Chain A, domain 1 0.63 48.0 3.24e-01 84.7% 41.4%
1vk6A02 3.90.79.10 Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase 0.63 51.0 4.18e-01 100.0% 64.1%
3a6sA00 3.90.79.10 Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase 0.63 51.0 4.22e-01 100.0% 68.0%
4h3sA02 2.40.240.10 Mainly Beta › Beta Barrel › Ribosomal Protein L25; Chain P › Ribosomal Protein L25; Chain P 0.63 53.0 4.28e-01 98.3% 80.8%
2hz7A05 2.40.240.10 Mainly Beta › Beta Barrel › Ribosomal Protein L25; Chain P › Ribosomal Protein L25; Chain P 0.62 52.0 4.17e-01 98.3% 87.5%
1ojqA00 3.90.176.10 Alpha Beta › Alpha-Beta Complex › Toxin ADP-ribosyltransferase; Chain A, domain 1 › Toxin ADP-ribosyltransferase; Chain A, domain 1 0.62 47.0 3.32e-01 86.4% 99.1%
4kyxA00 3.90.79.10 Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase 0.62 50.0 4.02e-01 100.0% 66.9%
3q91B00 3.90.79.10 Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase 0.61 50.0 4.09e-01 100.0% 64.9%
3eesA00 3.90.79.10 Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase 0.60 49.0 3.99e-01 100.0% 66.4%
6u7tA03 3.90.79.10 Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase 0.59 49.0 4.04e-01 100.0% 69.4%
1v6eA01 3.10.20.90 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 0.59 48.0 4.42e-01 93.2% 98.8%
1tifA00 3.10.20.80 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Translation initiation factor 3 (IF-3), N-terminal domain 0.58 42.0 3.93e-01 91.5% 61.8%
3m62B00 3.10.20.90 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 0.58 47.0 4.49e-01 94.9% 100.0%
7q5yB01 3.30.460.80 Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › NADH:ubiquinone oxidoreductase Nqo5 subunit 0.57 43.0 3.45e-01 81.4% 46.7%
5c68A00 3.10.180.10 Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 0.56 39.0 3.30e-01 83.1% 40.4%
2qdfA03 3.10.20.310 Alpha Beta › Roll › Ubiquitin-like (UB roll) › membrane protein fhac 0.56 47.0 4.40e-01 98.3% 97.4%
2r5vB02 3.10.180.10 Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 0.56 42.0 2.96e-01 83.1% 26.7%
4k3bA03 3.10.20.310 Alpha Beta › Roll › Ubiquitin-like (UB roll) › membrane protein fhac 0.56 47.0 4.12e-01 98.3% 96.7%
3gaaB00 3.40.50.10900 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › PAC-like subunit 0.55 39.0 2.70e-01 78.0% 83.5%
2k75A01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.54 36.0 3.17e-01 71.2% 86.4%
2shpB03 3.90.190.10 Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily 0.54 40.0 2.60e-01 79.7% 20.1%
6j09A04 3.10.20.310 Alpha Beta › Roll › Ubiquitin-like (UB roll) › membrane protein fhac 0.54 43.0 4.03e-01 91.5% 98.7%
2bzlA00 3.90.190.10 Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily 0.53 39.0 2.57e-01 79.7% 19.7%
3pufL00 2.40.128.680 Mainly Beta › Beta Barrel › Lipocalin › 0.53 42.0 3.50e-01 91.5% 65.5%
4bzaA02 3.10.20.310 Alpha Beta › Roll › Ubiquitin-like (UB roll) › membrane protein fhac 0.53 44.0 3.93e-01 94.9% 93.1%
2j4xA02 2.40.50.110 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.52 39.0 3.68e-01 98.3% 66.7%
2b9kA00 2.20.20.70 Mainly Beta › Single Sheet › Anthopleurin-A › 0.52 35.0 3.83e-01 89.8% 89.4%
3gqwB01 3.40.50.12780 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › ANL, N-terminal domain 0.51 43.0 2.57e-01 93.2% 48.3%
1nlrA00 2.60.120.180 Mainly Beta › Sandwich › Jelly Rolls › Glycoside hydrolase family 11/12, catalytic domain 0.51 39.0 2.72e-01 86.4% 33.8%
6iw6A02 3.30.460.10 Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › Beta Polymerase, domain 2 0.51 42.0 3.52e-01 94.9% 93.5%
2ghfA01 3.30.160.60 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Classic Zinc Finger 0.51 41.0 3.69e-01 96.6% 88.8%
8ornD01 2.50.20.10 Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › Lipoprotein localisation LolA/LolB/LppX 0.50 41.0 3.11e-01 100.0% 88.6%
2oc3A00 3.90.190.10 Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily 0.50 36.0 2.44e-01 81.4% 20.1%
ECOD (52)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4542419 239.2.1.1 beta barrels › Ribosomal protein L25-like › HisI-like › HisI-like › PRA-CH 0.80 73.0 5.72e-01 100.0% 63.3%
4928227 239.2.1.1 beta barrels › Ribosomal protein L25-like › HisI-like › HisI-like › PRA-CH 0.79 66.0 6.09e-01 89.8% 98.6%
4947178 239.2.1.1 beta barrels › Ribosomal protein L25-like › HisI-like › HisI-like › PRA-CH 0.79 72.0 5.48e-01 100.0% 59.2%
2775407 239.2.1.1 beta barrels › Ribosomal protein L25-like › HisI-like › HisI-like › PRA-CH 0.79 71.0 5.52e-01 100.0% 62.9%
4303049 239.2.1.1 beta barrels › Ribosomal protein L25-like › HisI-like › HisI-like › PRA-CH 0.79 71.0 5.32e-01 100.0% 56.4%
5075839 239.2.1.1 beta barrels › Ribosomal protein L25-like › HisI-like › HisI-like › PRA-CH 0.78 71.0 5.42e-01 100.0% 59.2%
4669977 239.2.1.0 beta barrels › Ribosomal protein L25-like › HisI-like › HisI-like 0.78 71.0 5.73e-01 100.0% 70.9%
4097972 239.2.1.1 beta barrels › Ribosomal protein L25-like › HisI-like › HisI-like › PRA-CH 0.78 70.0 5.58e-01 100.0% 67.0%
4383498 239.2.1.1 beta barrels › Ribosomal protein L25-like › HisI-like › HisI-like › PRA-CH 0.78 70.0 5.50e-01 100.0% 65.0%
4438870 239.2.1.1 beta barrels › Ribosomal protein L25-like › HisI-like › HisI-like › PRA-CH 0.77 69.0 5.60e-01 100.0% 73.6%
3707909 221.1.1.0 a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like 0.77 70.0 6.03e-01 100.0% 94.4%
4027082 4.6.1.0 beta barrels › SH3 › PRC-barrel domain › PRC-barrel domain 0.75 64.0 5.46e-01 94.9% 91.6%
5003977 2.1.1.380 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › PF26487 0.75 51.0 3.99e-01 71.2% 79.2%
3734548 221.4.1.1 a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX 0.74 65.0 4.52e-01 100.0% 45.1%
3592350 221.4.1.0 a+b two layers › beta-Grasp › Nudix › Nudix 0.72 63.0 4.78e-01 100.0% 57.9%
4964922 2.1.1.380 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › PF26487 0.72 49.0 4.04e-01 71.2% 88.6%
2869198 239.4.1.1 beta barrels › Ribosomal protein L25-like › Glutamine synthetase, N-terminal domain › Glutamine synthetase, N-terminal domain › Gln-synt_N 0.71 61.0 5.13e-01 98.3% 77.5%
4950806 4.6.1.8 beta barrels › SH3 › PRC-barrel domain › PRC-barrel domain › WH_Lhr 0.70 58.0 5.99e-01 98.3% 98.2%
3991309 221.4.1.1 a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX 0.69 59.0 4.07e-01 100.0% 43.6%
4373611 4237.1.1.1 beta barrels › FomD-like › FomD-like › FomD-like › DUF402 0.68 57.0 4.22e-01 100.0% 62.9%
4947785 239.1.1.0 beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like 0.68 58.0 5.58e-01 100.0% 88.4%
2061904 221.4.1.0 a+b two layers › beta-Grasp › Nudix › Nudix 0.68 58.0 4.30e-01 100.0% 50.3%
4157545 237.1.1.8 a+b complex topology › ADP-ribosylation › ADP-ribosylation › ADP-ribosylation › ADPrib_exo_Tox 0.67 50.0 3.77e-01 81.4% 66.7%
3947203 4212.1.1.2 beta barrels › FimD N-terminal domain-like › FimD N-terminal domain-like › FimD N-terminal domain-like › PF30442 0.67 58.0 4.73e-01 100.0% 85.2%
3573551 4.6.1.5 beta barrels › SH3 › PRC-barrel domain › PRC-barrel domain › tRNA_Me_trans_M 0.67 57.0 5.08e-01 96.6% 67.1%
1562728 237.1.1.8 a+b complex topology › ADP-ribosylation › ADP-ribosylation › ADP-ribosylation › ADPrib_exo_Tox 0.65 46.0 3.23e-01 76.3% 100.0%
157262 237.1.1.8 a+b complex topology › ADP-ribosylation › ADP-ribosylation › ADP-ribosylation › ADPrib_exo_Tox 0.65 51.0 3.60e-01 88.1% 97.6%
3886084 237.1.1.2 a+b complex topology › ADP-ribosylation › ADP-ribosylation › ADP-ribosylation › ART 0.65 48.0 3.28e-01 81.4% 45.8%
3176458 221.4.1.1 a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX 0.64 53.0 3.97e-01 100.0% 54.0%
3829376 11.1.4.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like 0.64 54.0 4.07e-01 94.9% 88.3%
7442 237.1.1.8 a+b complex topology › ADP-ribosylation › ADP-ribosylation › ADP-ribosylation › ADPrib_exo_Tox 0.62 47.0 3.32e-01 86.4% 99.1%
4459241 221.4.1.1 a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX 0.62 55.0 4.31e-01 100.0% 68.8%
3847997 239.4.1.1 beta barrels › Ribosomal protein L25-like › Glutamine synthetase, N-terminal domain › Glutamine synthetase, N-terminal domain › Gln-synt_N 0.62 52.0 4.45e-01 100.0% 74.3%
3390160 4.6.1.5 beta barrels › SH3 › PRC-barrel domain › PRC-barrel domain › tRNA_Me_trans_M 0.60 47.0 4.63e-01 91.5% 84.6%
4499818 221.4.1.9 a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX_4 0.60 50.0 4.15e-01 100.0% 73.9%
4012461 11.8.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Osmotin-like › Osmotin-like 0.60 51.0 3.76e-01 96.6% 96.2%
4276265 6012.1.1.0 few secondary structure elements › Antimicrobial peptide LCI › Antimicrobial peptide LCI › Antimicrobial peptide LCI 0.59 39.0 4.35e-01 93.2% 100.0%
3386655 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.59 36.0 3.64e-01 91.5% 58.3%
3666818 2.1.1.138 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › ATG11 0.56 44.0 3.98e-01 98.3% 62.5%
3740185 386.1.1.16 few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › Hat1_N 0.56 42.0 3.44e-01 79.7% 67.6%
3511593 2007.2.3.1 a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › (Phosphotyrosine protein) phosphatases II › Y_phosphatase 0.56 42.0 2.94e-01 81.4% 30.2%
3574082 2498.1.1.39 mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › SprT-like 0.55 38.0 3.27e-01 98.3% 46.7%
3994608 2007.2.3.1 a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › (Phosphotyrosine protein) phosphatases II › Y_phosphatase 0.55 40.0 2.79e-01 79.7% 25.6%
3972388 3121.1.1.1 a+b duplicates or obligate multimers › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain › POTRA 0.55 45.0 4.18e-01 94.9% 95.0%
3401713 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.53 41.0 3.30e-01 100.0% 40.0%
1144506 2.2.1.0 beta barrels › OB-fold › Bacterial enterotoxins › Bacterial enterotoxins 0.53 42.0 3.64e-01 100.0% 55.3%
3920500 4156.1.1.4 alpha arrays › Sec63 N-terminal subdomain-like › Sec63 N-terminal subdomain-like › Sec63 N-terminal subdomain-like › HA2_C 0.53 39.0 2.39e-01 84.7% 31.1%
4424922 237.1.1.34 a+b complex topology › ADP-ribosylation › ADP-ribosylation › ADP-ribosylation › ART, ADPrib_exo_Tox 0.52 37.0 2.62e-01 79.7% 44.7%
3567438 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.52 40.0 3.13e-01 100.0% 37.1%
3926869 2007.2.3.1 a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › (Phosphotyrosine protein) phosphatases II › Y_phosphatase 0.52 38.0 2.46e-01 81.4% 17.9%
3685780 2003.1.2.15 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FAD_binding_3 0.51 46.0 2.76e-01 100.0% 75.6%
3209511 2.1.1.219 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › OB_cyt-4 0.51 41.0 3.61e-01 93.2% 74.7%