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MW394391.1__QQV92113.1__vBKpMFBKp24_152__00152

Bact-Vir

MW394391.1__QQV92113.1__vBKpMFBKp24_152__00152

Identity

Accession:
MW394391 ↗
Kingdom:
phage

Quality

92.5 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Chimalliviridae› Maaswegvirus› Klebsiella_phage_vB_KpM_FBKp24

TaxID: 2801834

Cluster

Singleton — not in a non-trivial cluster

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 5-103
PDB
Domain cluster: rep: GWB1_scaffold_5_curated_closed_complete_prodigal-single.1__X__X__00514__D1-118
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF13328.13 best HD_4 35.8 9.40e-09 73.7% 35.3%
CATH (35)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1vj7B01 1.10.3210.10 Mainly Alpha › Orthogonal Bundle › Hypothetical protein af1432 › Hypothetical protein af1432 0.94 76.0 6.08e-01 100.0% 48.0%
7smgD00 1.10.3210.10 Mainly Alpha › Orthogonal Bundle › Hypothetical protein af1432 › Hypothetical protein af1432 0.92 72.0 6.22e-01 100.0% 56.3%
7qocA01 1.10.3210.10 Mainly Alpha › Orthogonal Bundle › Hypothetical protein af1432 › Hypothetical protein af1432 0.90 72.0 5.65e-01 96.0% 43.9%
3nqwA00 1.10.3210.10 Mainly Alpha › Orthogonal Bundle › Hypothetical protein af1432 › Hypothetical protein af1432 0.89 75.0 5.97e-01 100.0% 48.9%
2qgsB01 1.10.472.50 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › HD-domain/PDEase-like 0.79 67.0 7.07e-01 99.0% 100.0%
2pq7A00 1.10.3210.10 Mainly Alpha › Orthogonal Bundle › Hypothetical protein af1432 › Hypothetical protein af1432 0.72 66.0 5.41e-01 99.0% 59.5%
3bg2A01 1.10.3210.10 Mainly Alpha › Orthogonal Bundle › Hypothetical protein af1432 › Hypothetical protein af1432 0.69 64.0 5.08e-01 100.0% 66.1%
4rfsS00 1.10.1760.20 Mainly Alpha › Orthogonal Bundle › Arp2/3 complex 21 kDa subunit ARPC3 › 0.67 50.0 4.06e-01 79.8% 89.3%
4mlmA00 1.10.3210.10 Mainly Alpha › Orthogonal Bundle › Hypothetical protein af1432 › Hypothetical protein af1432 0.66 60.0 4.79e-01 97.0% 53.2%
3g2eB00 3.40.920.10 Alpha Beta › 3-Layer(aba) Sandwich › Pyruvate-ferredoxin Oxidoreductase; domain 3 › Pyruvate-ferredoxin oxidoreductase, PFOR, domain III 0.64 56.0 4.62e-01 98.0% 90.8%
6n2nA01 3.40.920.10 Alpha Beta › 3-Layer(aba) Sandwich › Pyruvate-ferredoxin Oxidoreductase; domain 3 › Pyruvate-ferredoxin oxidoreductase, PFOR, domain III 0.63 54.0 4.54e-01 98.0% 93.8%
2guhB00 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.61 33.0 2.74e-01 100.0% 28.1%
4s3mB02 1.10.1040.10 Mainly Alpha › Orthogonal Bundle › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 0.61 41.0 4.01e-01 100.0% 63.2%
4nb5B01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.60 42.0 4.45e-01 72.7% 97.6%
7kypB01 1.10.3470.10 Mainly Alpha › Orthogonal Bundle › ABC transporter involved in vitamin B12 uptake, BtuC › ABC transporter involved in vitamin B12 uptake, BtuC 0.60 46.0 3.36e-01 82.8% 59.6%
2pg0A03 1.20.140.10 Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 0.59 50.0 4.36e-01 91.9% 78.5%
1jkwA01 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.59 50.0 4.19e-01 98.0% 52.8%
3veaA01 1.20.1270.380 Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › MatP, N-terminal domain 0.59 44.0 4.58e-01 82.8% 86.5%
4v1gA00 1.20.20.10 Mainly Alpha › Up-down Bundle › F1FO ATP Synthase › F1F0 ATP synthase subunit C 0.59 31.0 3.31e-01 86.9% 58.8%
1egdA03 1.20.140.10 Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 0.59 49.0 4.38e-01 91.9% 83.0%
3h20A04 1.10.1240.50 Mainly Alpha › Orthogonal Bundle › Methyltransferase, Methionine Synthase (B12-binding Domains); Chain A, domain 1 › 0.58 42.0 4.36e-01 89.9% 84.3%
3b4qA00 1.10.1200.100 Mainly Alpha › Orthogonal Bundle › Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A › conserved protein domain from corynebacterium diphtheriae 0.58 37.0 3.92e-01 85.9% 73.6%
2yxlA01 1.10.940.10 Mainly Alpha › Orthogonal Bundle › N-utilizing Substance Protein B Homolog; Chain A › NusB-like 0.57 47.0 4.17e-01 93.9% 82.2%
2ld7B00 1.20.1160.11 Mainly Alpha › Up-down Bundle › Paired amphipathic helix 2 (pah2 repeat) › Paired amphipathic helix 0.56 37.0 4.13e-01 88.9% 90.7%
2hoqA02 1.10.150.520 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › 0.56 41.0 4.47e-01 81.8% 100.0%
5zw7A03 1.20.140.10 Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 0.55 48.0 4.17e-01 94.9% 72.4%
3r2cA00 1.10.940.10 Mainly Alpha › Orthogonal Bundle › N-utilizing Substance Protein B Homolog; Chain A › NusB-like 0.55 46.0 4.16e-01 92.9% 91.3%
2jifA03 1.20.140.10 Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 0.55 45.0 3.98e-01 92.9% 71.4%
4akgA06 1.10.8.710 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Dynein motor, AAA1 domain, small subdomain 0.55 45.0 4.40e-01 98.0% 84.1%
3h4cA02 1.10.472.110 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › 0.55 45.0 4.44e-01 98.0% 83.6%
2x3mA00 1.25.40.670 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › 0.54 39.0 3.31e-01 75.8% 73.5%
1q6aA00 1.10.1240.30 Mainly Alpha › Orthogonal Bundle › Methyltransferase, Methionine Synthase (B12-binding Domains); Chain A, domain 1 › KaiA/RbsU domain 0.52 42.0 4.15e-01 86.9% 82.2%
2v57A00 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.51 38.0 3.22e-01 78.8% 80.1%
3ie7A00 3.40.1190.20 Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase 0.51 38.0 2.71e-01 78.8% 32.0%
4g1tA02 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.50 28.0 3.25e-01 96.0% 82.0%
ECOD (49)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4606782 131.1.1.12 ↗ alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like › HD_4 0.95 78.0 6.21e-01 100.0% 48.0%
4215090 131.1.1.12 ↗ alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like › HD_4 0.94 76.0 5.78e-01 100.0% 40.5%
3961396 131.1.1.12 ↗ alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like › HD_4 0.94 76.0 5.90e-01 100.0% 43.7%
3683167 131.1.1.12 ↗ alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like › HD_4 0.94 75.0 5.82e-01 99.0% 43.2%
3386161 131.1.1.12 ↗ alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like › HD_4 0.93 74.0 5.64e-01 99.0% 40.0%
4822932 131.1.1.0 ↗ alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like 0.92 70.0 7.09e-01 98.0% 78.8%
3668020 131.1.1.12 ↗ alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like › HD_4 0.92 75.0 5.72e-01 100.0% 41.0%
3265073 131.1.1.12 ↗ alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like › HD_4 0.92 75.0 5.73e-01 98.0% 42.0%
4959337 131.1.1.0 ↗ alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like 0.91 70.0 6.05e-01 100.0% 55.7%
3584809 131.1.1.12 ↗ alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like › HD_4 0.90 76.0 5.91e-01 100.0% 45.1%
4929438 131.1.1.12 ↗ alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like › HD_4 0.89 72.0 5.63e-01 100.0% 43.7%
5038603 131.1.1.12 ↗ alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like › HD_4 0.89 75.0 5.65e-01 100.0% 41.3%
2998334 131.1.1.12 ↗ alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like › HD_4 0.88 67.0 5.36e-01 100.0% 43.2%
3964980 131.1.1.12 ↗ alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like › HD_4 0.86 70.0 5.38e-01 100.0% 42.0%
4789 131.1.1.3 ↗ alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like › HD 0.76 71.0 5.44e-01 100.0% 47.4%
4452139 131.1.1.3 ↗ alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like › HD 0.69 59.0 5.17e-01 93.9% 72.0%
5001655 131.1.1.3 ↗ alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like › HD 0.69 63.0 4.98e-01 100.0% 64.5%
3686110 131.1.1.3 ↗ alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like › HD 0.65 60.0 4.61e-01 100.0% 59.5%
5059392 2004.1.3.1 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › Pyruvate-ferredoxin oxidoreductase, PFOR, domain III › POR 0.64 56.0 4.56e-01 98.0% 86.3%
5080366 2004.1.3.1 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › Pyruvate-ferredoxin oxidoreductase, PFOR, domain III › POR 0.63 56.0 4.62e-01 98.0% 93.1%
4951565 2004.1.3.1 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › Pyruvate-ferredoxin oxidoreductase, PFOR, domain III › POR 0.63 56.0 4.58e-01 98.0% 86.1%
5042339 5065.1.1.1 ↗ alpha bundles › Type II ABC importer transmembrane domain fold › Type II ABC importer transmembrane domain fold › Type II ABC importer transmembrane domain fold › ABC-3 0.61 46.0 3.42e-01 80.8% 69.8%
4091818 377.1.1.11 ↗ few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › RecO_C 0.61 48.0 4.16e-01 85.9% 97.4%
4398761 377.1.1.11 ↗ few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › RecO_C 0.60 47.0 4.17e-01 85.9% 98.0%
4380981 377.1.1.11 ↗ few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › RecO_C 0.60 47.0 4.09e-01 85.9% 97.4%
3972586 377.1.1.11 ↗ few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › RecO_C 0.60 47.0 4.08e-01 85.9% 95.5%
4152848 377.1.1.11 ↗ few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › RecO_C 0.59 46.0 4.09e-01 85.9% 97.3%
5065847 528.1.1.1 ↗ alpha bundles › ADP-ribosylglycohydrolase › ADP-ribosylglycohydrolase › ADP-ribosylglycohydrolase › ADP_ribosyl_GH 0.59 44.0 3.16e-01 79.8% 89.3%
3962600 633.6.1.0 ↗ alpha bundles › Bromodomain-like › Acyl-CoA dehydrogenase C-terminal domain-like › Acyl-CoA dehydrogenase C-terminal domain-like 0.58 48.0 4.27e-01 91.9% 79.1%
5041499 633.6.1.1 ↗ alpha bundles › Bromodomain-like › Acyl-CoA dehydrogenase C-terminal domain-like › Acyl-CoA dehydrogenase C-terminal domain-like › Acyl-CoA_dh_1 0.58 50.0 4.36e-01 94.9% 77.3%
5038534 633.6.1.1 ↗ alpha bundles › Bromodomain-like › Acyl-CoA dehydrogenase C-terminal domain-like › Acyl-CoA dehydrogenase C-terminal domain-like › Acyl-CoA_dh_1 0.58 48.0 4.28e-01 91.9% 80.7%
2391969 633.6.1.1 ↗ alpha bundles › Bromodomain-like › Acyl-CoA dehydrogenase C-terminal domain-like › Acyl-CoA dehydrogenase C-terminal domain-like › Acyl-CoA_dh_1 0.58 49.0 4.16e-01 93.9% 68.9%
4679946 3869.1.1.1 ↗ alpha arrays › Mitochondrial 54S ribosomal protein L2 › Mitochondrial 54S ribosomal protein L2 › Mitochondrial 54S ribosomal protein L2 › Ribosomal_L27_C 0.57 43.0 3.44e-01 82.8% 42.5%
3962329 633.6.1.0 ↗ alpha bundles › Bromodomain-like › Acyl-CoA dehydrogenase C-terminal domain-like › Acyl-CoA dehydrogenase C-terminal domain-like 0.57 49.0 4.25e-01 94.9% 70.3%
3903368 310.2.1.0 ↗ a+b two layers › RRF/tRNA synthetase additional domain-like › Ribosome recycling factor, RRF › Ribosome recycling factor, RRF 0.56 44.0 3.88e-01 84.8% 74.7%
223656 633.6.1.1 ↗ alpha bundles › Bromodomain-like › Acyl-CoA dehydrogenase C-terminal domain-like › Acyl-CoA dehydrogenase C-terminal domain-like › Acyl-CoA_dh_1 0.55 47.0 4.06e-01 94.9% 71.5%
5027041 102.3.1.0 ↗ alpha arrays › HhH/H2TH › eIF2alpha middle domain › eIF2alpha middle domain 0.55 39.0 4.13e-01 72.7% 88.2%
3626546 109.4.1.921 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_IF140-IFT172 0.55 37.0 3.22e-01 97.0% 44.5%
5040685 5065.1.1.1 ↗ alpha bundles › Type II ABC importer transmembrane domain fold › Type II ABC importer transmembrane domain fold › Type II ABC importer transmembrane domain fold › ABC-3 0.55 43.0 3.16e-01 83.8% 63.0%
4003044 109.4.1.2155 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_8, TPR_IF140-IFT172 0.54 37.0 3.25e-01 97.0% 47.6%
3476205 5050.1.1.0 ↗ alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter 0.54 44.0 3.61e-01 92.9% 98.0%
3290961 106.1.1.11 ↗ alpha arrays › Globin-like › Globin-like › Globin-like › RsbRD_N 0.54 46.0 4.06e-01 100.0% 82.6%
5012016 5050.1.1.0 ↗ alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter 0.53 42.0 3.36e-01 86.9% 78.5%
3551542 873.1.1.5 ↗ a+b complex topology › H-NOX domain › H-NOX domain › H-NOX domain › HNOB 0.53 45.0 3.62e-01 92.9% 68.9%
4986745 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.53 39.0 3.30e-01 78.8% 57.4%
4454896 129.1.1.4 ↗ alpha arrays › 6-phosphogluconate dehydrogenase C-terminal domain-like › 6-phosphogluconate dehydrogenase C-terminal domain-like › 6-phosphogluconate dehydrogenase C-terminal domain-like › IlvC 0.52 41.0 3.57e-01 85.9% 56.6%
4928273 3236.1.1.1 ↗ alpha complex topology › Cation-proton antiporter › Cation-proton antiporter (CPA) › Cation-proton antiporter (CPA) › Na_H_Exchanger 0.52 42.0 2.91e-01 89.9% 75.7%
4991072 129.1.1.4 ↗ alpha arrays › 6-phosphogluconate dehydrogenase C-terminal domain-like › 6-phosphogluconate dehydrogenase C-terminal domain-like › 6-phosphogluconate dehydrogenase C-terminal domain-like › IlvC 0.52 40.0 3.54e-01 85.9% 56.6%
3735597 148.1.3.0 ↗ alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain 0.51 38.0 4.07e-01 100.0% 95.3%
D2 high residues 116-225
PDB
Domain cluster: representative
CATH (18)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1t98A02 1.20.58.590 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Chromosome partition protein MukF, middle domain 0.70 50.0 4.41e-01 74.5% 93.3%
4c0eA01 1.25.40.790 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › 0.68 52.0 3.87e-01 80.9% 38.5%
2q1fA02 1.50.10.100 Mainly Alpha › Alpha/alpha barrel › Glycosyltransferase › Chondroitin AC/alginate lyase 0.68 55.0 3.68e-01 85.5% 54.3%
4gyvE00 1.20.900.10 Mainly Alpha › Up-down Bundle › Dbl Homology Domain; Chain A › Dbl homology (DH) domain 0.67 48.0 3.88e-01 74.5% 87.4%
3mpxA01 1.20.900.10 Mainly Alpha › Up-down Bundle › Dbl Homology Domain; Chain A › Dbl homology (DH) domain 0.67 53.0 4.34e-01 85.5% 98.5%
4gouA03 1.20.900.10 Mainly Alpha › Up-down Bundle › Dbl Homology Domain; Chain A › Dbl homology (DH) domain 0.65 46.0 3.82e-01 73.6% 98.5%
1oe8A02 1.20.1050.10 Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › 0.64 50.0 4.79e-01 81.8% 87.1%
2sqcA02 1.50.10.20 Mainly Alpha › Alpha/alpha barrel › Glycosyltransferase › 0.64 56.0 4.21e-01 96.4% 89.0%
1w6kA03 1.50.10.20 Mainly Alpha › Alpha/alpha barrel › Glycosyltransferase › 0.63 55.0 4.10e-01 98.2% 90.2%
6idxA01 1.25.10.10 Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant 0.62 48.0 3.90e-01 84.5% 44.3%
4epzA00 1.25.40.810 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › UpxZ 0.62 51.0 4.63e-01 91.8% 86.4%
3n3dB00 1.10.600.10 Mainly Alpha › Orthogonal Bundle › Farnesyl Diphosphate Synthase › Farnesyl Diphosphate Synthase 0.61 44.0 3.23e-01 75.5% 76.7%
1sz9C00 1.25.40.90 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › 0.60 48.0 4.44e-01 88.2% 67.9%
2ongA01 1.50.10.130 Mainly Alpha › Alpha/alpha barrel › Glycosyltransferase › Terpene synthase, N-terminal domain 0.55 49.0 4.06e-01 100.0% 83.8%
4n1yB00 1.10.565.10 Mainly Alpha › Orthogonal Bundle › Retinoid X Receptor › Retinoid X Receptor 0.54 49.0 3.83e-01 99.1% 87.2%
4d0nB01 1.20.900.10 Mainly Alpha › Up-down Bundle › Dbl Homology Domain; Chain A › Dbl homology (DH) domain 0.52 39.0 3.16e-01 82.7% 69.4%
4dhdA00 1.10.600.10 Mainly Alpha › Orthogonal Bundle › Farnesyl Diphosphate Synthase › Farnesyl Diphosphate Synthase 0.52 39.0 2.86e-01 80.9% 79.0%
1oshA00 1.10.565.10 Mainly Alpha › Orthogonal Bundle › Retinoid X Receptor › Retinoid X Receptor 0.50 43.0 3.52e-01 96.4% 75.9%
ECOD (36)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3740079 109.4.1.207 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › HEAT_2 0.74 53.0 4.41e-01 76.4% 43.8%
3875003 133.1.1.1 ↗ alpha bundles › DH domain-like › DBL homology domain (DH-domain) › DBL homology domain (DH-domain) › RhoGEF 0.74 53.0 4.17e-01 73.6% 80.0%
3194155 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.73 56.0 3.56e-01 80.9% 45.0%
3613711 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.71 52.0 3.78e-01 77.3% 41.3%
3599948 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.71 51.0 3.93e-01 74.5% 50.2%
5046003 4070.1.1.0 ↗ alpha arrays › FtsH protease domain-like › FtsH protease domain-like › FtsH protease domain-like 0.70 50.0 4.17e-01 73.6% 82.6%
4998419 109.4.1.257 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PDS5 0.70 53.0 4.04e-01 80.9% 34.8%
3536158 133.1.1.1 ↗ alpha bundles › DH domain-like › DBL homology domain (DH-domain) › DBL homology domain (DH-domain) › RhoGEF 0.68 48.0 3.87e-01 73.6% 72.1%
3896722 622.6.1.0 ↗ alpha bundles › YvfG-like › NLR family member X1 C-terminal domain › NLR family member X1 C-terminal domain 0.67 48.0 3.39e-01 74.5% 37.9%
4619006 109.4.1.25 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › DIL 0.66 59.0 4.11e-01 100.0% 77.5%
3477817 133.1.1.1 ↗ alpha bundles › DH domain-like › DBL homology domain (DH-domain) › DBL homology domain (DH-domain) › RhoGEF 0.66 49.0 3.79e-01 78.2% 86.5%
3486343 109.54.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › C-terminal tetramerization domain of Utp1/Utp21/Utp12/Utp13 › C-terminal tetramerization domain of Utp1/Utp21/Utp12/Utp13 0.65 49.0 4.14e-01 78.2% 60.6%
3268903 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.65 48.0 3.59e-01 78.2% 31.1%
3692148 603.1.1.0 ↗ alpha bundles › STAT-like › t-snare proteins › t-snare proteins 0.65 55.0 5.00e-01 93.6% 85.3%
2775146 184.1.1.0 ↗ alpha arrays › Nucleoside phosphorylase/phosphoribosyltransferase-N › Nucleoside phosphorylase/phosphoribosyltransferase-N › Nucleoside phosphorylase/phosphoribosyltransferase-N 0.64 47.0 5.19e-01 82.7% 97.7%
3607331 109.4.1.1255 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Adaptin_N, Cnd1 0.64 58.0 3.49e-01 100.0% 16.3%
3192502 109.4.1.356 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Fungal_trans 0.63 55.0 3.72e-01 96.4% 56.7%
3711872 109.4.1.1255 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Adaptin_N, Cnd1 0.63 56.0 3.39e-01 100.0% 20.4%
3830303 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.62 50.0 3.28e-01 84.5% 24.1%
4249547 304.41.1.1 ↗ a+b two layers › Alpha-beta plaits › Glutamyl tRNA-reductase catalytic, N-terminal domain › Glutamyl tRNA-reductase catalytic, N-terminal domain › GlutR_N 0.62 43.0 4.03e-01 71.8% 80.7%
3605579 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.62 46.0 3.50e-01 79.1% 60.7%
3736151 109.4.1.356 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Fungal_trans 0.62 52.0 3.34e-01 91.8% 64.0%
3652671 109.4.1.329 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › CDC14 0.61 50.0 3.79e-01 88.2% 54.0%
4022483 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.61 51.0 3.48e-01 93.6% 67.7%
3847522 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.60 51.0 3.80e-01 92.7% 82.1%
4013444 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.59 43.0 4.38e-01 80.9% 79.0%
3709348 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.59 46.0 4.57e-01 84.5% 83.5%
3177931 133.1.1.1 ↗ alpha bundles › DH domain-like › DBL homology domain (DH-domain) › DBL homology domain (DH-domain) › RhoGEF 0.58 40.0 3.18e-01 70.9% 80.9%
3409330 109.4.1.110 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Mad3_BUB1_I 0.57 45.0 3.64e-01 83.6% 91.4%
3974874 4946.1.1.1 ↗ alpha bundles › helical domain in YacF-like proteins › helical domain in YacF-like proteins › helical domain in YacF-like proteins › ZapD 0.57 40.0 3.45e-01 72.7% 65.0%
3514289 109.4.1.159 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › ELMO_ARM 0.57 44.0 3.59e-01 84.5% 42.3%
4948103 613.1.1.1 ↗ alpha complex topology › Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) › Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) › Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) › tRNA-synt_2c 0.56 47.0 3.79e-01 94.5% 75.1%
3314757 109.4.1.1256 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, PPR_3 0.55 40.0 3.37e-01 76.4% 46.2%
2141494 4002.1.1.5 ↗ alpha bundles › alpha-helical domain in dehydroquinate synthase-like enzymes › alpha-helical domain in dehydroquinate synthase-like enzymes › alpha-helical domain in dehydroquinate synthase-like enzymes › ADH_Fe_C 0.54 44.0 3.65e-01 91.8% 82.1%
3575934 109.4.1.891 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › HEAT_HEATR1 0.54 44.0 3.43e-01 92.7% 46.7%
5050505 4002.1.1.5 ↗ alpha bundles › alpha-helical domain in dehydroquinate synthase-like enzymes › alpha-helical domain in dehydroquinate synthase-like enzymes › alpha-helical domain in dehydroquinate synthase-like enzymes › ADH_Fe_C 0.53 42.0 3.44e-01 87.3% 77.2%