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MW394391.1__QQV92286.1__vBKpMFBKp24_148__00148

Bact-Vir

MW394391.1__QQV92286.1__vBKpMFBKp24_148__00148

Identity

Accession:
MW394391 ↗
Kingdom:
phage

Quality

77.4 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 56-110
PDB
Domain cluster: representative
CATH (50)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
6v7xB02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.92 65.0 6.54e-01 74.5% 73.2%
1a04A02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.91 64.0 5.52e-01 72.7% 50.0%
3vfzB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.91 72.0 6.84e-01 83.6% 74.6%
5fgmA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.91 70.0 6.60e-01 81.8% 72.3%
6uglB02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.91 65.0 6.36e-01 74.5% 70.7%
6cc0A02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.90 64.0 5.84e-01 74.5% 60.0%
3p7nA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.89 64.0 5.75e-01 74.5% 56.9%
5f64A02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.88 63.0 5.61e-01 74.5% 56.0%
3hugA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.88 67.0 5.87e-01 81.8% 58.7%
3ulqB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.87 62.0 6.12e-01 74.5% 70.7%
1p4wA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.86 60.0 5.07e-01 72.7% 47.1%
6jqsA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.86 62.0 5.73e-01 74.5% 61.2%
2w7nA00 1.10.10.2690 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › 0.86 68.0 5.60e-01 85.5% 54.3%
2lvsA01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.85 59.0 5.93e-01 72.7% 71.4%
1l3lA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.84 60.0 5.75e-01 74.5% 66.7%
3c57B00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.84 65.0 6.84e-01 83.6% 91.8%
4rocA01 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.83 58.0 4.62e-01 72.7% 43.7%
1k78A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.83 64.0 6.00e-01 94.5% 68.2%
5z4zC00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.83 59.0 4.96e-01 74.5% 48.9%
4go1A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.82 61.0 6.22e-01 78.2% 81.5%
2esnA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.81 58.0 4.88e-01 74.5% 46.1%
2x4hA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.79 55.0 4.10e-01 72.7% 35.7%
3tgnB02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.79 55.0 5.26e-01 72.7% 65.1%
4pcqA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.78 57.0 5.97e-01 76.4% 88.0%
1wi9A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.78 54.0 5.36e-01 72.7% 72.4%
1c9bA01 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.77 56.0 4.62e-01 78.2% 47.4%
1ho8A01 1.25.10.10 Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant 0.75 44.0 2.67e-01 81.8% 9.9%
5jciA01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.75 60.0 4.00e-01 87.3% 97.2%
3fdqA01 1.20.120.1030 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Motility repressor MogR, DNA-binding domain 0.74 64.0 5.02e-01 100.0% 63.1%
3zh9B03 1.20.272.10 Mainly Alpha › Up-down Bundle › Zinc Finger, Delta Prime; domain 3 › 0.73 60.0 4.49e-01 89.1% 61.1%
3bs3A00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.72 48.0 4.70e-01 96.4% 63.3%
2jn6A01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.72 64.0 5.48e-01 98.2% 65.9%
3g2bA00 1.10.10.1150 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Coenzyme PQQ synthesis protein D (PqqD) 0.71 52.0 4.45e-01 78.2% 53.3%
2om6A02 1.10.150.400 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › 0.71 54.0 4.69e-01 80.0% 72.2%
2a6cA00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.69 52.0 4.67e-01 100.0% 57.9%
3vbbE01 1.10.287.40 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Serine-tRNA synthetase, tRNA binding domain 0.69 60.0 4.74e-01 100.0% 98.3%
6sdkA01 1.10.10.2830 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › 0.68 59.0 4.89e-01 96.4% 57.7%
2elhA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.68 59.0 5.57e-01 96.4% 78.8%
3op9A01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.68 47.0 4.43e-01 98.2% 58.8%
3qo8A01 1.10.287.40 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Serine-tRNA synthetase, tRNA binding domain 0.68 59.0 4.83e-01 100.0% 96.2%
2ebyA01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.68 49.0 4.39e-01 78.2% 97.5%
3ivpD01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.66 46.0 4.21e-01 100.0% 54.7%
6rnzA00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.65 49.0 4.59e-01 100.0% 66.7%
7dvrA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.64 48.0 3.63e-01 83.6% 70.2%
6ig5A01 1.10.275.10 Mainly Alpha › Orthogonal Bundle › Fumarase C; Chain B, domain 1 › Fumarase/aspartase (N-terminal domain) 0.63 55.0 4.10e-01 98.2% 47.8%
4yg1A00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.62 46.0 4.23e-01 100.0% 61.1%
1lliA00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.60 45.0 3.84e-01 96.4% 49.4%
1hy0A01 1.10.275.10 Mainly Alpha › Orthogonal Bundle › Fumarase C; Chain B, domain 1 › Fumarase/aspartase (N-terminal domain) 0.60 54.0 4.02e-01 100.0% 47.4%
1qdmA03 1.10.225.10 Mainly Alpha › Orthogonal Bundle › NK-Lysin › Saposin-like 0.56 47.0 4.25e-01 98.2% 81.8%
1op1A00 1.20.81.10 Mainly Alpha › Up-down Bundle › Receptor-associated Protein › RAP domain 0.54 46.0 4.11e-01 100.0% 75.6%
ECOD (72)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4347676 101.1.6.4 alpha arrays › HTH › HTH › TrpR › Bac_DnaA_C 0.96 72.0 5.91e-01 78.2% 48.9%
4978135 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.95 74.0 5.21e-01 81.8% 31.0%
4976095 101.1.2.141 alpha arrays › HTH › HTH › winged helix domain › HTH_24 0.94 65.0 6.60e-01 72.7% 72.7%
5022417 101.1.3.8 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › Sigma70_r4_2 0.94 67.0 5.63e-01 74.5% 49.4%
4987653 101.1.2.139 alpha arrays › HTH › HTH › winged helix domain › HTH_23 0.93 62.0 6.90e-01 72.7% 84.4%
3314861 101.1.1.267 alpha arrays › HTH › HTH › Three-helical HTH › PF26138 0.93 72.0 5.43e-01 81.8% 38.3%
3943462 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.93 71.0 7.13e-01 80.0% 81.8%
4947436 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.92 73.0 7.37e-01 83.6% 87.3%
3944309 101.1.3.1 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.92 66.0 6.96e-01 74.5% 82.0%
4944726 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.92 75.0 7.27e-01 85.5% 80.0%
4943227 101.1.1.63 alpha arrays › HTH › HTH › Three-helical HTH › HTH_28 0.92 63.0 6.89e-01 70.9% 86.7%
3741290 101.1.1.201 alpha arrays › HTH › HTH › Three-helical HTH › Bot1p 0.92 78.0 6.43e-01 89.1% 54.4%
4148347 101.1.1.26 alpha arrays › HTH › HTH › Three-helical HTH › UPF0122 0.92 71.0 5.62e-01 81.8% 44.2%
3409145 101.1.1.24 alpha arrays › HTH › HTH › Three-helical HTH › CENP-B_N 0.92 60.0 6.27e-01 70.9% 74.0%
3340619 2484.1.1.0 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.92 67.0 4.14e-01 76.4% 16.5%
4010691 101.1.3.1 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.91 65.0 6.55e-01 74.5% 74.5%
4197050 101.1.6.4 alpha arrays › HTH › HTH › TrpR › Bac_DnaA_C 0.91 71.0 5.55e-01 81.8% 42.9%
4534822 101.1.1.107 alpha arrays › HTH › HTH › Three-helical HTH › DUF134 0.91 73.0 6.49e-01 85.5% 65.3%
4934485 101.1.1.107 alpha arrays › HTH › HTH › Three-helical HTH › DUF134 0.91 73.0 6.52e-01 85.5% 66.2%
4979402 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.90 63.0 6.13e-01 72.7% 66.7%
4974140 101.1.2.141 alpha arrays › HTH › HTH › winged helix domain › HTH_24 0.90 60.0 4.77e-01 94.5% 38.0%
4944862 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.90 73.0 6.28e-01 85.5% 61.3%
3204111 101.1.1.201 alpha arrays › HTH › HTH › Three-helical HTH › Bot1p 0.90 79.0 6.63e-01 92.7% 63.5%
4014894 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.89 78.0 5.53e-01 92.7% 37.5%
3190018 101.1.1.201 alpha arrays › HTH › HTH › Three-helical HTH › Bot1p 0.89 78.0 6.72e-01 92.7% 67.5%
4244028 101.1.1.107 alpha arrays › HTH › HTH › Three-helical HTH › DUF134 0.89 71.0 6.92e-01 85.5% 81.7%
5061884 101.1.2.887 alpha arrays › HTH › HTH › winged helix domain › DUF1670 0.88 77.0 5.36e-01 94.5% 35.6%
5064701 101.1.2.879 alpha arrays › HTH › HTH › winged helix domain › DUF134 0.88 70.0 6.09e-01 85.5% 61.3%
3988724 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.87 64.0 6.18e-01 90.9% 70.0%
5021231 101.1.1.544 alpha arrays › HTH › HTH › Three-helical HTH › DUF1670 0.87 76.0 6.46e-01 94.5% 68.2%
4969699 101.1.6.40 alpha arrays › HTH › HTH › TrpR › DUF1670 0.87 75.0 6.56e-01 94.5% 75.0%
5023952 101.1.2.888 alpha arrays › HTH › HTH › winged helix domain › Sigma70_r4_2 0.86 64.0 5.86e-01 78.2% 62.9%
3509159 101.1.1.24 alpha arrays › HTH › HTH › Three-helical HTH › CENP-B_N 0.86 60.0 5.83e-01 76.4% 66.7%
4659976 101.1.1.25 alpha arrays › HTH › HTH › Three-helical HTH › DUF433 0.85 62.0 4.44e-01 76.4% 29.4%
3947091 101.1.3.0 alpha arrays › HTH › HTH › tetra-helical, LuxR-like 0.85 61.0 5.91e-01 74.5% 68.3%
3857628 101.1.3.29 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › CENP-B_N 0.84 59.0 5.53e-01 76.4% 61.5%
3981688 101.1.3.0 alpha arrays › HTH › HTH › tetra-helical, LuxR-like 0.84 60.0 5.62e-01 74.5% 64.6%
3502245 101.1.6.13 alpha arrays › HTH › HTH › TrpR › HTH_28 0.84 63.0 6.94e-01 94.5% 97.8%
4010015 101.1.6.23 alpha arrays › HTH › HTH › TrpR › PF30445 0.83 58.0 6.62e-01 94.5% 100.0%
3476699 101.1.1.60 alpha arrays › HTH › HTH › Three-helical HTH › HTH_23 0.83 62.0 5.23e-01 78.2% 68.2%
3565285 101.1.1.24 alpha arrays › HTH › HTH › Three-helical HTH › CENP-B_N 0.83 59.0 5.56e-01 76.4% 63.1%
5064314 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.82 69.0 6.71e-01 100.0% 81.7%
3279913 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.82 72.0 4.83e-01 96.4% 35.3%
4334910 101.1.1.107 alpha arrays › HTH › HTH › Three-helical HTH › DUF134 0.81 71.0 5.30e-01 94.5% 44.8%
3198859 101.1.1.63 alpha arrays › HTH › HTH › Three-helical HTH › HTH_28 0.81 59.0 5.73e-01 94.5% 70.0%
4945039 101.1.6.0 alpha arrays › HTH › HTH › TrpR 0.81 66.0 6.43e-01 94.5% 80.0%
4383273 101.1.1.201 alpha arrays › HTH › HTH › Three-helical HTH › Bot1p 0.80 73.0 5.32e-01 100.0% 48.2%
3693312 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.78 57.0 5.60e-01 78.2% 78.3%
4973961 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.75 59.0 4.90e-01 85.5% 87.4%
3998880 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.75 62.0 5.25e-01 94.5% 69.5%
4060647 101.1.6.0 alpha arrays › HTH › HTH › TrpR 0.74 65.0 6.13e-01 94.5% 90.8%
3544647 101.1.1.24 alpha arrays › HTH › HTH › Three-helical HTH › CENP-B_N 0.73 64.0 5.99e-01 92.7% 83.1%
3410877 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.73 52.0 4.84e-01 90.9% 60.0%
4125982 101.1.2.40 alpha arrays › HTH › HTH › winged helix domain › CPSase_L_D3 0.73 61.0 4.24e-01 94.5% 30.0%
4862437 101.1.1.198 alpha arrays › HTH › HTH › Three-helical HTH › KorB 0.72 63.0 5.89e-01 98.2% 80.9%
3590885 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.71 58.0 5.38e-01 94.5% 70.0%
4968186 101.1.6.12 alpha arrays › HTH › HTH › TrpR › HTH_23 0.71 53.0 5.69e-01 92.7% 97.8%
4002185 101.1.1.24 alpha arrays › HTH › HTH › Three-helical HTH › CENP-B_N 0.70 63.0 5.55e-01 94.5% 85.3%
3963064 101.1.1.251 alpha arrays › HTH › HTH › Three-helical HTH › HTH_ParB 0.70 61.0 5.05e-01 100.0% 56.0%
5016203 101.1.2.40 alpha arrays › HTH › HTH › winged helix domain › CPSase_L_D3 0.69 56.0 4.14e-01 94.5% 41.2%
4492078 1.1.2.1 beta barrels › cradle loop barrel › RIFT-related › double psi › RNA_pol_Rpb2_6 0.69 61.0 3.93e-01 100.0% 27.6%
3753093 101.1.1.24 alpha arrays › HTH › HTH › Three-helical HTH › CENP-B_N 0.68 60.0 5.62e-01 94.5% 83.1%
3618452 101.1.1.52 alpha arrays › HTH › HTH › Three-helical HTH › BrkDBD 0.68 55.0 5.55e-01 98.2% 87.3%
3873677 101.1.1.24 alpha arrays › HTH › HTH › Three-helical HTH › CENP-B_N 0.67 60.0 5.50e-01 98.2% 75.7%
3509240 101.1.1.24 alpha arrays › HTH › HTH › Three-helical HTH › CENP-B_N 0.67 58.0 5.46e-01 94.5% 78.5%
3404418 101.1.1.24 alpha arrays › HTH › HTH › Three-helical HTH › CENP-B_N 0.66 59.0 5.44e-01 98.2% 78.6%
4114241 4952.1.1.0 alpha arrays › L-aspartase N-terminal domain-like › L-aspartase N-terminal domain-like › L-aspartase N-terminal domain-like 0.64 57.0 4.66e-01 98.2% 65.0%
4291782 4952.1.1.0 alpha arrays › L-aspartase N-terminal domain-like › L-aspartase N-terminal domain-like › L-aspartase N-terminal domain-like 0.62 56.0 4.43e-01 100.0% 60.0%
2767750 101.1.4.8 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › Phage_CP76 0.60 42.0 3.70e-01 96.4% 47.6%
4935457 5054.1.1.6 alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels › TrkH 0.59 44.0 3.15e-01 81.8% 40.0%
4999897 101.1.4.0 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like 0.57 46.0 4.14e-01 98.2% 64.0%
4295116 6130.1.1.1 alpha complex topology › Selenocysteine synthase N-terminal domain › Selenocysteine synthase N-terminal domain › Selenocysteine synthase N-terminal domain › Se-cys_synth_N 0.52 43.0 3.91e-01 92.7% 88.0%