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MW394467.1__QQO40349.1__268TH004_3__00003

Bact-Vir

MW394467.1__QQO40349.1__268TH004_3__00003

Identity

Accession:
MW394467 ↗
Kingdom:
phage

Quality

78.2 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 3-78
PDB
Domain cluster: representative
CATH (49)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1nafA02 1.20.58.160 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.81 70.0 6.80e-01 94.7% 92.9%
3a98A02 1.20.1270.350 Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Dedicator of cytokinesis N-terminal subdomain 0.79 52.0 4.94e-01 100.0% 58.6%
2cwoA01 1.20.58.1200 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › RNA silencing suppressor P21, N-terminal domain 0.79 69.0 7.04e-01 94.7% 95.9%
2b1eA01 1.20.58.1150 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.78 64.0 6.18e-01 94.7% 79.1%
2zueA03 1.10.730.10 Mainly Alpha › Orthogonal Bundle › Isoleucyl-tRNA Synthetase; Domain 1 › Isoleucyl-tRNA Synthetase; Domain 1 0.78 69.0 5.96e-01 98.7% 73.9%
3kbtA00 1.20.58.60 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.78 64.0 4.30e-01 93.4% 23.9%
1uurA01 1.20.58.240 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › STAT; domain 1 0.78 67.0 5.92e-01 94.7% 88.2%
2mtqA00 1.20.58.130 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.78 62.0 6.33e-01 93.4% 90.4%
1j1jA02 1.20.58.200 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Translin; domain 2 0.77 66.0 6.36e-01 94.7% 83.5%
2v5cA03 1.20.58.460 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Hyaluronidase post-catalytic domain-like 0.77 61.0 5.07e-01 92.1% 50.0%
1chuA03 1.20.58.100 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain 0.76 66.0 6.33e-01 94.7% 83.0%
3axjB02 1.20.58.200 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Translin; domain 2 0.76 63.0 6.08e-01 94.7% 81.2%
4g1tA02 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.76 51.0 5.56e-01 94.7% 86.9%
3r2qA02 1.20.1050.10 Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › 0.75 66.0 5.84e-01 100.0% 77.9%
8d7hD01 1.20.1250.10 Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › 0.75 62.0 4.70e-01 89.5% 69.9%
3zc0D00 1.20.58.2140 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.75 64.0 4.78e-01 94.7% 40.1%
1qsdA00 1.20.58.90 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.75 64.0 5.79e-01 94.7% 99.0%
5u56A02 1.20.1050.10 Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › 0.74 67.0 5.87e-01 100.0% 85.7%
2x1lA03 1.10.730.10 Mainly Alpha › Orthogonal Bundle › Isoleucyl-tRNA Synthetase; Domain 1 › Isoleucyl-tRNA Synthetase; Domain 1 0.74 64.0 4.86e-01 94.7% 86.6%
1j5wA02 1.20.58.180 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Class II aaRS and biotin synthetases; domain 2 0.72 57.0 5.71e-01 94.7% 84.4%
3l8rA00 1.20.58.80 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit 0.72 60.0 5.48e-01 93.4% 83.3%
2b7mA00 1.20.1280.170 Mainly Alpha › Up-down Bundle › Monooxygenase › Exocyst complex component Exo70 0.71 63.0 3.80e-01 100.0% 23.8%
2xevB00 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.71 52.0 4.46e-01 98.7% 48.4%
1br0A00 1.20.58.70 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.70 58.0 5.03e-01 92.1% 86.7%
3l1nA02 1.20.1280.140 Mainly Alpha › Up-down Bundle › Monooxygenase › 0.70 57.0 5.49e-01 89.5% 90.8%
4wzxA01 1.20.58.80 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit 0.70 56.0 5.73e-01 93.4% 90.7%
2i0mA02 1.20.58.220 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphate transport system protein phou homolog 2; domain 2 0.70 58.0 5.28e-01 92.1% 83.2%
3bvoA02 1.20.1280.20 Mainly Alpha › Up-down Bundle › Monooxygenase › HscB, C-terminal domain 0.69 57.0 5.53e-01 90.8% 83.7%
3a7mA01 1.20.58.380 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Flagellar protein flit. 0.68 57.0 5.09e-01 93.4% 67.3%
1rqgA04 1.10.730.10 Mainly Alpha › Orthogonal Bundle › Isoleucyl-tRNA Synthetase; Domain 1 › Isoleucyl-tRNA Synthetase; Domain 1 0.67 57.0 4.65e-01 98.7% 80.1%
4etrB00 1.20.1260.10 Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle 0.67 56.0 4.84e-01 94.7% 87.7%
4aifA00 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.65 56.0 4.59e-01 98.7% 59.0%
1wfdA00 1.20.58.80 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit 0.65 51.0 4.84e-01 96.1% 72.0%
1i36A02 1.10.1040.10 Mainly Alpha › Orthogonal Bundle › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 0.64 53.0 4.88e-01 89.5% 89.9%
7zb5E01 3.40.50.10810 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Tandem AAA-ATPase domain 0.64 54.0 3.75e-01 100.0% 62.5%
1ks9A02 1.10.1040.10 Mainly Alpha › Orthogonal Bundle › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 0.63 53.0 4.56e-01 93.4% 95.1%
3h3mA00 1.20.58.380 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Flagellar protein flit. 0.63 51.0 4.94e-01 92.1% 84.3%
1e7uA05 1.10.1070.11 Mainly Alpha › Orthogonal Bundle › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, Domain 5 › Phosphatidylinositol 3-/4-kinase, catalytic domain 0.63 51.0 3.86e-01 90.8% 61.3%
4rngC00 1.20.1280.290 Mainly Alpha › Up-down Bundle › Monooxygenase › 0.62 50.0 4.95e-01 92.1% 86.7%
2yksA02 1.20.58.390 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Neurotransmitter-gated ion-channel transmembrane domain 0.61 50.0 4.40e-01 93.4% 61.5%
7vkcA01 1.10.1070.20 Mainly Alpha › Orthogonal Bundle › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, Domain 5 › 0.60 47.0 3.74e-01 86.8% 75.8%
2qupA00 1.20.120.490 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Hypothetical protein TM1646-like domain 0.58 50.0 4.34e-01 96.1% 61.3%
3hugA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.57 42.0 4.16e-01 77.6% 77.5%
5wp3B00 1.10.132.20 Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › Ribosome-recycling factor 0.56 46.0 4.23e-01 93.4% 88.2%
1yo7A00 1.20.120.230 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Alpha-catenin/vinculin-like 0.55 44.0 3.96e-01 94.7% 67.5%
2zgyA02 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.55 48.0 3.97e-01 98.7% 85.0%
2wzkA02 1.20.1310.10 Mainly Alpha › Up-down Bundle › 5 helical Cullin repeat like › Cullin Repeats 0.55 46.0 4.03e-01 100.0% 82.7%
3c18A02 1.20.120.330 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Nucleotidyltransferases domain 2 0.54 47.0 4.10e-01 97.4% 77.1%
2m6uA00 1.20.81.20 Mainly Alpha › Up-down Bundle › Receptor-associated Protein › 0.54 39.0 3.89e-01 76.3% 75.6%
ECOD (56)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3584478 1134.1.1.0 alpha bundles › C-terminal helical domain of alanine-tRNA ligase › C-terminal helical domain of alanine-tRNA ligase › Eukaryotic C-Ala helical domain 0.79 66.0 6.23e-01 93.4% 75.6%
1877520 604.1.1.7 alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › SR_plectin_7 0.79 67.0 5.78e-01 93.4% 81.4%
5032064 604.3.1.0 alpha bundles › Spectrin repeat-like › BAG domain › BAG domain 0.77 63.0 6.30e-01 93.4% 86.1%
5045530 604.1.1.0 alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat 0.77 66.0 6.22e-01 93.4% 88.9%
3883670 604.1.1.7 alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › SR_plectin_7 0.77 66.0 5.68e-01 94.7% 80.8%
3577230 604.1.1.5 alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › Spectrin_3 0.77 65.0 5.86e-01 93.4% 85.7%
3497466 604.6.1.0 alpha bundles › Spectrin repeat-like › GAT-like domain › GAT-like domain 0.76 65.0 6.13e-01 93.4% 85.6%
3580283 604.1.1.0 alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat 0.76 65.0 6.31e-01 94.7% 92.9%
3319968 604.12.1.0 alpha bundles › Spectrin repeat-like › MIT domain › MIT domain 0.76 62.0 6.45e-01 94.7% 98.6%
3221764 603.2.1.0 alpha bundles › STAT-like › STAT › STAT 0.76 63.0 6.25e-01 94.7% 87.5%
3637444 4121.1.1.0 a+b three layers › CorA soluble domain-like › CorA soluble domain-like › CorA soluble domain-like 0.75 64.0 4.42e-01 94.7% 30.2%
3812703 3758.1.1.7 alpha bundles › Bacterial hemolysins-like › Bacterial hemolysins › Bacterial hemolysins › BPS1 0.75 66.0 4.71e-01 98.7% 93.7%
3584048 604.1.1.0 alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat 0.73 61.0 5.83e-01 93.4% 80.0%
3601088 109.4.1.643 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › COG2_C 0.73 66.0 3.86e-01 100.0% 20.0%
3628598 603.1.1.0 alpha bundles › STAT-like › t-snare proteins › t-snare proteins 0.73 62.0 6.12e-01 94.7% 92.5%
3947894 604.3.1.0 alpha bundles › Spectrin repeat-like › BAG domain › BAG domain 0.73 60.0 5.94e-01 94.7% 86.3%
5018763 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.73 64.0 4.86e-01 98.7% 50.6%
3716154 604.12.1.0 alpha bundles › Spectrin repeat-like › MIT domain › MIT domain 0.73 58.0 5.79e-01 93.4% 83.7%
3689557 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.72 63.0 4.86e-01 98.7% 73.5%
3245731 604.6.1.0 alpha bundles › Spectrin repeat-like › GAT-like domain › GAT-like domain 0.72 61.0 6.04e-01 94.7% 90.0%
5057804 109.7.1.0 alpha superhelices › Repetitive alpha hairpins › Cytochrome c oxidase subunit E › Cytochrome c oxidase subunit E 0.72 56.0 5.64e-01 94.7% 86.7%
3577229 604.1.1.0 alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat 0.71 60.0 5.23e-01 93.4% 86.1%
3732909 603.1.1.0 alpha bundles › STAT-like › t-snare proteins › t-snare proteins 0.71 60.0 5.93e-01 93.4% 93.8%
3968965 604.3.1.0 alpha bundles › Spectrin repeat-like › BAG domain › BAG domain 0.71 60.0 5.68e-01 93.4% 78.9%
3638386 603.1.1.111 alpha bundles › STAT-like › t-snare proteins › t-snare proteins › TBCC_N 0.71 59.0 5.36e-01 93.4% 71.4%
5072045 604.10.1.0 alpha bundles › Spectrin repeat-like › Enzyme IIa from lactose specific PTS, IIa-lac › Enzyme IIa from lactose specific PTS, IIa-lac 0.70 62.0 5.59e-01 100.0% 83.8%
3535006 604.12.1.1 alpha bundles › Spectrin repeat-like › MIT domain › MIT domain › MIT 0.70 56.0 5.11e-01 93.4% 64.8%
3259313 174.1.1.0 few secondary structure elements › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain 0.69 58.0 4.79e-01 93.4% 68.6%
4998520 604.12.1.1 alpha bundles › Spectrin repeat-like › MIT domain › MIT domain › MIT 0.69 54.0 5.47e-01 94.7% 86.7%
3893371 604.1.1.7 alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › SR_plectin_7 0.69 58.0 5.13e-01 94.7% 87.8%
3402139 604.12.1.1 alpha bundles › Spectrin repeat-like › MIT domain › MIT domain › MIT 0.69 55.0 5.33e-01 93.4% 78.8%
3812592 109.4.1.1948 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Zw10_middle 0.68 62.0 4.82e-01 100.0% 73.1%
3584334 604.12.1.56 alpha bundles › Spectrin repeat-like › MIT domain › MIT domain › ASTER 0.68 57.0 5.43e-01 96.1% 77.8%
3883622 604.12.1.1 alpha bundles › Spectrin repeat-like › MIT domain › MIT domain › MIT 0.68 53.0 5.36e-01 94.7% 86.7%
4999686 604.12.1.1 alpha bundles › Spectrin repeat-like › MIT domain › MIT domain › MIT 0.67 54.0 5.42e-01 94.7% 90.7%
4628458 604.1.1.226 alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › PF26877 0.67 55.0 5.37e-01 93.4% 97.6%
3910599 604.1.1.7 alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › SR_plectin_7 0.67 55.0 4.88e-01 93.4% 83.5%
5055919 159.1.1.4 alpha bundles › all-alpha NTP pyrophosphatases › all-alpha NTP pyrophosphatases › Hypothetical protein AF_0060 › PRA-PH 0.67 46.0 4.40e-01 72.4% 64.4%
5076876 604.12.1.1 alpha bundles › Spectrin repeat-like › MIT domain › MIT domain › MIT 0.66 50.0 4.96e-01 93.4% 78.8%
4036392 140.1.1.11 alpha bundles › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › DALR_1 0.65 53.0 4.75e-01 92.1% 64.5%
3283218 5059.1.1.1 alpha bundles › Drug/Metabolite transporter › Drug/Metabolite transporter › Drug/Metabolite transporter › EamA 0.65 49.0 3.40e-01 82.9% 92.1%
3578534 6155.1.1.2 alpha duplicates or obligate multimers › TOG superfamily › SWEET transporter › SWEET transporter › PQ-loop 0.64 53.0 4.77e-01 90.8% 75.2%
5031064 604.3.1.0 alpha bundles › Spectrin repeat-like › BAG domain › BAG domain 0.64 52.0 4.83e-01 93.4% 70.0%
3717803 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.62 51.0 3.66e-01 92.1% 62.6%
4977808 604.12.1.0 alpha bundles › Spectrin repeat-like › MIT domain › MIT domain 0.62 49.0 5.10e-01 93.4% 95.7%
3268622 604.12.1.1 alpha bundles › Spectrin repeat-like › MIT domain › MIT domain › MIT 0.61 48.0 4.46e-01 94.7% 64.8%
3731082 604.12.1.0 alpha bundles › Spectrin repeat-like › MIT domain › MIT domain 0.61 46.0 4.62e-01 93.4% 84.0%
3862034 6155.1.1.0 alpha duplicates or obligate multimers › TOG superfamily › SWEET transporter › SWEET transporter 0.61 49.0 4.80e-01 92.1% 85.9%
5063219 109.25.1.15 alpha superhelices › Repetitive alpha hairpins › GPCR-autoproteolysis inducing domain subdomain A › GPCR-autoproteolysis inducing domain subdomain A › Cpn60_TCP1 0.60 51.0 4.22e-01 100.0% 51.7%
3915254 563.2.1.0 alpha bundles › ATPD N-terminal domain-like › Cas Cmr5-like › Cas Cmr5-like 0.60 46.0 3.81e-01 84.2% 80.0%
3248619 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.56 46.0 3.46e-01 96.1% 36.3%
3603229 3843.1.1.0 alpha complex topology › NADH-quinone oxidoreductase subunit K › NADH-quinone oxidoreductase subunit K › NADH-quinone oxidoreductase subunit K 0.56 44.0 4.26e-01 100.0% 75.3%
4938085 5058.1.1.0 alpha bundles › Mechanosensitive channel protein MscS (YggB), transmembrane region › Mechanosensitive channel protein MscS (YggB), transmembrane region › Mechanosensitive channel protein MscS (YggB), transmembrane region 0.54 45.0 4.26e-01 93.4% 83.2%
3995656 106.1.1.1 alpha arrays › Globin-like › Globin-like › Globin-like › Globin 0.53 42.0 3.47e-01 93.4% 83.7%
5009732 131.1.1.3 alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like › HD 0.52 43.0 3.32e-01 100.0% 85.7%
4624818 621.1.1.0 alpha bundles › Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain › Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain › Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain 0.50 39.0 3.81e-01 93.4% 87.8%