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MW419084.1__QQO40486.1__000TH008_58__00058
Bact-VirMW419084.1__QQO40486.1__000TH008_58__00058
Identity
- Accession:
- MW419084 ↗
- Kingdom:
- phage
Quality
70.4
mean pLDDT
Taxonomy
TaxID: 2801830
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 2-91
Domain cluster:
rep: IMGVR_UViG_3300037454_000906-3300037454-Ga0394156_0000018_122143_122796__D10-91
CATH (25)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1gmuA01 | 3.30.70.790 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › UreE, C-terminal domain | 0.59 | 38.0 | 4.18e-01 | 85.6% | 86.6% |
| 1earA02 | 3.30.70.790 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › UreE, C-terminal domain | 0.59 | 38.0 | 4.17e-01 | 85.6% | 84.1% |
| 1wvqA00 | 3.40.1520.10 | Alpha Beta › 3-Layer(aba) Sandwich › hypothetical protein tt1634 › Ta1353-like | 0.59 | 48.0 | 4.09e-01 | 93.3% | 78.5% |
| 3rrkA03 | 3.30.70.2750 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.58 | 41.0 | 4.39e-01 | 84.4% | 89.2% |
| 1qh5A00 | 3.60.15.10 | Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like | 0.56 | 42.0 | 3.11e-01 | 82.2% | 36.5% |
| 2r7hB00 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.55 | 43.0 | 3.63e-01 | 85.6% | 96.9% |
| 1ctfA00 | 3.30.1390.10 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein L30; Chain: A, › Ribosomal protein L7/L12, C-terminal domain/Adaptor protein ClpS | 0.54 | 39.0 | 4.24e-01 | 93.3% | 100.0% |
| 1sc6A03 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.54 | 39.0 | 4.12e-01 | 84.4% | 85.4% |
| 3pm9A03 | 3.30.70.2190 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.54 | 43.0 | 3.99e-01 | 90.0% | 82.6% |
| 1rwuA00 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.53 | 40.0 | 4.11e-01 | 84.4% | 83.9% |
| 2kdoA03 | 3.30.70.240 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.53 | 38.0 | 4.03e-01 | 87.8% | 86.3% |
| 2p1wA01 | 3.30.2430.10 | Alpha Beta › 2-Layer Sandwich › Phosphothreonine lyase fold › phosphothreonine lyase | 0.53 | 44.0 | 3.61e-01 | 94.4% | 71.3% |
| 1f0xA01 | 3.30.70.610 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › D-lactate dehydrogenase, cap domain, subdomain 1 | 0.53 | 44.0 | 4.27e-01 | 91.1% | 87.0% |
| 4x0qA03 | 3.30.70.370 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.53 | 43.0 | 3.74e-01 | 91.1% | 65.0% |
| 3gz7B00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.53 | 43.0 | 4.20e-01 | 90.0% | 92.9% |
| 3lnlB02 | 3.30.70.120 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.52 | 41.0 | 4.15e-01 | 91.1% | 89.8% |
| 3d68A01 | 3.30.70.340 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Metallocarboxypeptidase-like | 0.52 | 40.0 | 4.01e-01 | 93.3% | 82.6% |
| 3c8mA02 | 3.30.360.10 | Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 | 0.51 | 36.0 | 2.98e-01 | 72.2% | 87.0% |
| 5k9fA00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.51 | 42.0 | 4.07e-01 | 90.0% | 90.3% |
| 4hl9A00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.51 | 41.0 | 4.07e-01 | 90.0% | 93.6% |
| 6lpnA03 | 3.30.70.2190 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.51 | 41.0 | 3.83e-01 | 90.0% | 87.7% |
| 4ushA00 | 3.30.70.120 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.51 | 42.0 | 4.10e-01 | 95.6% | 85.4% |
| 3e8oB00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.50 | 40.0 | 3.96e-01 | 90.0% | 90.0% |
| 4pcqA02 | 3.30.70.920 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Lrp/AsnC effector binding domain/regulation of amino acid metabolism (RAM) domain | 0.50 | 39.0 | 4.01e-01 | 91.1% | 89.3% |
| 4zosB00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.50 | 41.0 | 4.02e-01 | 91.1% | 93.8% |
ECOD (30)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3539611 | 2485.1.1.51 ↗ | a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › Thioredoxin_14 | 0.66 | 44.0 | 3.21e-01 | 70.0% | 26.7% |
| 5031632 | 101.1.4.0 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like | 0.60 | 46.0 | 4.96e-01 | 94.4% | 98.7% |
| None | — | 0.60 | 43.0 | 3.86e-01 | 75.6% | 86.2% | |
| 3879126 | 108.1.1.97 ↗ | alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_1, EF-hand_7 | 0.60 | 42.0 | 4.26e-01 | 72.2% | 98.9% |
| 3934758 | 3775.1.1.1 ↗ | beta barrels › Lysosome membrane protein 2 lumenal domain › Lysosome membrane protein 2 lumenal domain › Lysosome membrane protein 2 lumenal domain › CD36 | 0.59 | 41.0 | 2.62e-01 | 71.1% | 52.2% |
| 3166613 | 304.107.1.7 ↗ | a+b two layers › Alpha-beta plaits › Aminomethyltransferase folate-binding domain › Aminomethyltransferase folate-binding domain › POP1_N+POPLD | 0.59 | 47.0 | 3.24e-01 | 90.0% | 81.2% |
| 2859887 | 3345.1.1.0 ↗ | alpha arrays › MRG domain › MRG domain › MRG domain | 0.58 | 45.0 | 3.75e-01 | 82.2% | 91.2% |
| 3639587 | 2002.1.1.22 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › ICL | 0.58 | 42.0 | 2.57e-01 | 75.6% | 18.4% |
| 4389062 | 101.1.9.8 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › IF2_N | 0.57 | 34.0 | 3.96e-01 | 70.0% | 88.3% |
| 4995419 | 592.2.1.0 ↗ | alpha arrays › PWI domain-like › YugE-like › YugE-like | 0.57 | 40.0 | 4.09e-01 | 72.2% | 92.9% |
| 5012698 | 101.1.4.0 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like | 0.56 | 47.0 | 4.81e-01 | 94.4% | 98.8% |
| 4126255 | 4967.1.1.25 ↗ | alpha bundles › helical bundle domain in reverse transcriptase-like polymerases › helical bundle domain in reverse transcriptase-like polymerases › helical bundle domain in reverse transcriptase-like polymerases › Intron_maturas2+MatK_N | 0.56 | 45.0 | 3.23e-01 | 87.8% | 83.3% |
| 3715080 | 304.9.1.1 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › RRM_1 | 0.56 | 46.0 | 3.73e-01 | 94.4% | 82.6% |
| 4997285 | 304.6.1.1 ↗ | a+b two layers › Alpha-beta plaits › FAD-linked oxidases, C-terminal domain › FAD-linked oxidases, C-terminal domain › FAD-oxidase_C | 0.56 | 47.0 | 3.46e-01 | 94.4% | 48.0% |
| 5064558 | 2003.6.1.1 ↗ | a/b three-layered sandwiches › Rossmann-like › Ribokinase-like › Ribokinase-like › PfkB | 0.55 | 47.0 | 3.18e-01 | 96.7% | 30.0% |
| 5023541 | 101.1.4.0 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like | 0.55 | 48.0 | 4.59e-01 | 97.8% | 94.3% |
| 3438142 | 108.1.1.73 ↗ | alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_5+EF-hand_7 | 0.55 | 40.0 | 3.63e-01 | 76.7% | 70.4% |
| 4162668 | 308.1.1.1 ↗ | a+b two layers › ClpS-like › ClpS-related › ClpS-related › Ribosomal_L12 | 0.55 | 41.0 | 4.15e-01 | 94.4% | 80.9% |
| 3624832 | 304.9.1.0 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD | 0.54 | 44.0 | 4.20e-01 | 92.2% | 79.1% |
| 3284838 | 304.6.1.1 ↗ | a+b two layers › Alpha-beta plaits › FAD-linked oxidases, C-terminal domain › FAD-linked oxidases, C-terminal domain › FAD-oxidase_C | 0.53 | 44.0 | 3.31e-01 | 93.3% | 47.9% |
| 4521579 | 873.1.1.1 ↗ | a+b complex topology › H-NOX domain › H-NOX domain › H-NOX domain › V4R | 0.53 | 44.0 | 3.52e-01 | 93.3% | 94.7% |
| 3195389 | 304.9.1.43 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › NCBP3 | 0.53 | 42.0 | 3.78e-01 | 92.2% | 77.1% |
| 3596843 | 108.1.1.0 ↗ | alpha arrays › EF-hand › EF-hand-related › EF-hand | 0.52 | 39.0 | 3.86e-01 | 80.0% | 98.9% |
| 3297020 | 108.1.1.99 ↗ | alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_5, EF-hand_6, EF-hand_7 | 0.52 | 36.0 | 3.52e-01 | 72.2% | 85.0% |
| 3637587 | 2486.1.1.7 ↗ | a/b three-layered sandwiches › ClpP/crotonase › ClpP/crotonase › ClpP/crotonase › Peptidase_S41 | 0.52 | 44.0 | 3.02e-01 | 94.4% | 71.7% |
| 3958135 | 308.1.1.0 ↗ | a+b two layers › ClpS-like › ClpS-related › ClpS-related | 0.52 | 38.0 | 3.97e-01 | 90.0% | 90.0% |
| 3267461 | 108.1.1.99 ↗ | alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_5, EF-hand_6, EF-hand_7 | 0.51 | 37.0 | 3.35e-01 | 75.6% | 68.8% |
| 3802087 | 108.1.1.99 ↗ | alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_5, EF-hand_6, EF-hand_7 | 0.51 | 36.0 | 2.91e-01 | 75.6% | 64.1% |
| 1234960 | 304.4.1.24 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › DyP_N | 0.51 | 42.0 | 3.44e-01 | 92.2% | 77.8% |
| 3957032 | 308.2.1.0 ↗ | a+b two layers › ClpS-like › Penicillin binding protein ClpS-like domain › Penicillin binding protein ClpS-like domain | 0.50 | 40.0 | 4.18e-01 | 94.4% | 100.0% |
D2
medium
residues 114-171
Domain cluster:
representative