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MW419084.1__QQO40648.1__000TH008_220__00220
Bact-VirMW419084.1__QQO40648.1__000TH008_220__00220
Identity
- Accession:
- MW419084 ↗
- Kingdom:
- phage
Quality
85.0
mean pLDDT
Taxonomy
TaxID: 2801830
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 12-53
Domain cluster:
rep: MN043729.1__QDP42811.1__Goe8_c00270__00027__D11-52
D2
high
residues 66-139
Domain cluster:
representative
CATH (41)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1ri6A00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.70 | 54.0 | 3.52e-01 | 83.8% | 55.3% |
| 5wbyC01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.69 | 54.0 | 3.52e-01 | 83.8% | 33.2% |
| 3u4yA00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.69 | 53.0 | 3.46e-01 | 82.4% | 33.5% |
| 1e2rA02 | 2.140.10.20 | Mainly Beta › 8 Propeller › Methanol Dehydrogenase; Chain A › C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase | 0.69 | 54.0 | 3.35e-01 | 85.1% | 43.8% |
| 3hfqA00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.69 | 52.0 | 3.35e-01 | 81.1% | 40.6% |
| 1l0qA01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.68 | 54.0 | 3.54e-01 | 85.1% | 47.5% |
| 3cqyB01 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.67 | 46.0 | 3.43e-01 | 70.3% | 44.6% |
| 3bwsA02 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.67 | 53.0 | 3.49e-01 | 86.5% | 37.2% |
| 7x36A01 | 2.120.10.30 | Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain | 0.67 | 52.0 | 3.42e-01 | 85.1% | 46.8% |
| 6grrB01 | 3.30.457.10 | Alpha Beta › 2-Layer Sandwich › Copper Amine Oxidase; Chain A, domain 1 › Copper amine oxidase-like, N-terminal domain | 0.66 | 56.0 | 5.56e-01 | 100.0% | 88.6% |
| 7uhyA01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.65 | 56.0 | 3.63e-01 | 93.2% | 99.0% |
| 4nsxA02 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.64 | 49.0 | 3.29e-01 | 83.8% | 51.3% |
| 2p4oA01 | 2.120.10.30 | Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain | 0.64 | 51.0 | 3.42e-01 | 87.8% | 70.5% |
| 4ozuA01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.63 | 55.0 | 3.53e-01 | 95.9% | 89.0% |
| 4azzA00 | 2.60.120.560 | Mainly Beta › Sandwich › Jelly Rolls › Exo-inulinase; domain 1 | 0.62 | 53.0 | 4.20e-01 | 100.0% | 55.8% |
| 4g7nA01 | 3.30.1120.120 | Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › | 0.61 | 52.0 | 4.46e-01 | 95.9% | 62.8% |
| 1gbgA00 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.60 | 52.0 | 3.84e-01 | 100.0% | 44.9% |
| 1k32A02 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.60 | 49.0 | 3.23e-01 | 91.9% | 30.6% |
| 1npeA00 | 2.120.10.30 | Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain | 0.60 | 49.0 | 3.42e-01 | 91.9% | 60.8% |
| 7ne4A01 | 2.130.10.120 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › Prolyl oligopeptidase, N-terminal domain | 0.60 | 47.0 | 3.08e-01 | 85.1% | 38.6% |
| 1p32B00 | 3.10.280.10 | Alpha Beta › Roll › Mitochondrial Matrix Protein; Chain A › Mitochondrial glycoprotein | 0.60 | 49.0 | 3.75e-01 | 98.6% | 39.2% |
| 6qk7A01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.60 | 50.0 | 3.23e-01 | 91.9% | 91.4% |
| 5gm0A01 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.59 | 51.0 | 4.16e-01 | 100.0% | 66.9% |
| 3vv1A00 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.59 | 50.0 | 4.19e-01 | 100.0% | 66.0% |
| 1jofA00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.58 | 48.0 | 3.12e-01 | 91.9% | 99.2% |
| 6fcvB00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.58 | 49.0 | 3.19e-01 | 95.9% | 75.3% |
| 5z5dA02 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.57 | 48.0 | 3.67e-01 | 100.0% | 47.2% |
| 4wvmA04 | 2.60.120.920 | Mainly Beta › Sandwich › Jelly Rolls › SPRY domain | 0.56 | 48.0 | 3.61e-01 | 97.3% | 83.5% |
| 5f7uA02 | 2.60.40.1760 | Mainly Beta › Sandwich › Immunoglobulin-like › glycosyl hydrolase (family 31) | 0.54 | 47.0 | 3.37e-01 | 97.3% | 81.9% |
| 5mu3B00 | 3.40.50.12050 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.54 | 45.0 | 3.57e-01 | 94.6% | 72.4% |
| 2xqyA01 | 3.30.500.50 | Alpha Beta › 2-Layer Sandwich › Murine Class I Major Histocompatibility Complex, H2-DB; Chain A, domain 1 › | 0.53 | 44.0 | 3.36e-01 | 91.9% | 57.9% |
| 4h63Q04 | 3.90.1150.120 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › | 0.53 | 46.0 | 4.00e-01 | 97.3% | 72.4% |
| 2giaB00 | 2.30.31.40 | Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › | 0.53 | 41.0 | 3.39e-01 | 86.5% | 72.6% |
| 5h4eA02 | 3.30.920.50 | Alpha Beta › 2-Layer Sandwich › Metal Transport, Frataxin; Chain A › Beta-1,3-glucanase, C-terminal domain | 0.53 | 40.0 | 3.47e-01 | 90.5% | 51.3% |
| 3gvzA00 | 3.60.60.10 | Alpha Beta › 4-Layer Sandwich › Penicillin V Acylase; Chain A › Penicillin V Acylase; Chain A | 0.53 | 42.0 | 3.01e-01 | 91.9% | 80.5% |
| 2o3iA02 | 2.40.390.10 | Mainly Beta › Beta Barrel › CV3147-like › CV3147-like | 0.52 | 44.0 | 3.80e-01 | 100.0% | 65.6% |
| 1e2tA03 | 2.40.128.150 | Mainly Beta › Beta Barrel › Lipocalin › Cysteine proteinases | 0.51 | 44.0 | 3.86e-01 | 100.0% | 62.4% |
| 1si5H01 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.51 | 41.0 | 3.57e-01 | 90.5% | 97.5% |
| 1autC01 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.51 | 40.0 | 3.39e-01 | 89.2% | 99.3% |
| 5pabH01 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.51 | 41.0 | 3.49e-01 | 91.9% | 98.4% |
| 1buiA01 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.50 | 40.0 | 3.46e-01 | 91.9% | 98.4% |
ECOD (46)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3487741 | 5.1.3.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed | 0.70 | 59.0 | 3.90e-01 | 90.5% | 56.2% |
| 3257215 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.69 | 57.0 | 3.56e-01 | 90.5% | 58.0% |
| 3274509 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.69 | 58.0 | 3.53e-01 | 91.9% | 65.3% |
| 145091 | 5.1.4.35 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Lactonase | 0.69 | 53.0 | 3.46e-01 | 82.4% | 33.5% |
| 5046360 | 12.3.1.0 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich | 0.69 | 60.0 | 4.18e-01 | 98.6% | 90.4% |
| 3703728 | 5.1.5.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed | 0.67 | 51.0 | 3.32e-01 | 79.7% | 21.6% |
| 4969372 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.67 | 53.0 | 3.15e-01 | 86.5% | 28.8% |
| 5051212 | 506.2.1.2 ↗ | beta meanders › Colicin E3 ribonuclease domain-like › UvrB interaction domain › UvrB interaction domain › UvrB_inter | 0.66 | 46.0 | 4.31e-01 | 95.9% | 58.9% |
| 135088 | 241.3.1.1 ↗ | a+b two layers › Type III secretory system chaperone-like › N domain of copper amine oxidase › N domain of copper amine oxidase › Cu_amine_oxidN1 | 0.66 | 56.0 | 5.39e-01 | 100.0% | 81.4% |
| 3740435 | 5.1.4.35 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Lactonase | 0.66 | 54.0 | 3.52e-01 | 90.5% | 49.7% |
| 4101337 | 3425.2.1.0 ↗ | a+b three layers › Two-component system yycF/yycG regulatory protein yycH-like › YycH C-terminal domain › YycH C-terminal domain | 0.66 | 47.0 | 3.23e-01 | 74.3% | 42.0% |
| 3520807 | 5.1.4.139 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40_2 | 0.66 | 55.0 | 3.32e-01 | 90.5% | 72.9% |
| 143915 | 5.1.4.35 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Lactonase | 0.66 | 51.0 | 3.30e-01 | 85.1% | 54.5% |
| 5017944 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.65 | 53.0 | 3.50e-01 | 89.2% | 59.7% |
| 3608100 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.65 | 51.0 | 3.23e-01 | 86.5% | 40.7% |
| 4383876 | 5.1.11.21 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 9-bladed › WD40, Beta-prop_NOL10_N | 0.65 | 54.0 | 3.43e-01 | 91.9% | 68.9% |
| 4405848 | 5.1.3.154 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › PF30361 | 0.65 | 57.0 | 3.62e-01 | 97.3% | 90.7% |
| 3775550 | 5.1.4.254 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40, Beta-prop_NOL10_N | 0.65 | 54.0 | 3.41e-01 | 93.2% | 89.0% |
| 3392175 | 5.1.3.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed | 0.65 | 54.0 | 3.66e-01 | 91.9% | 97.4% |
| 3485597 | 5.1.5.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed | 0.64 | 53.0 | 3.39e-01 | 90.5% | 31.8% |
| 3607492 | 5.1.4.4 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40,DUF1899,WD40_4 | 0.64 | 56.0 | 3.49e-01 | 95.9% | 76.0% |
| 3707403 | 5.1.4.382 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40, DUF1899, ANAPC4_WD40, WD40_4 | 0.64 | 56.0 | 3.52e-01 | 95.9% | 77.9% |
| 4648951 | 4099.1.1.26 ↗ | a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like › Kre28 | 0.64 | 54.0 | 4.95e-01 | 95.9% | 77.0% |
| 5060548 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.63 | 54.0 | 3.91e-01 | 95.9% | 90.2% |
| 3719566 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.63 | 50.0 | 3.34e-01 | 86.5% | 61.0% |
| 3269700 | 5.1.4.8 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › CNH | 0.63 | 50.0 | 3.33e-01 | 86.5% | 44.1% |
| 4179057 | 4099.1.1.26 ↗ | a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like › Kre28 | 0.62 | 54.0 | 4.92e-01 | 98.6% | 80.0% |
| 3323488 | 5.1.5.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed | 0.62 | 51.0 | 3.41e-01 | 91.9% | 97.7% |
| 3248668 | 79.1.1.0 ↗ | beta duplicates or obligate multimers › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain | 0.62 | 48.0 | 4.76e-01 | 85.1% | 78.8% |
| 3708814 | 5.1.4.102 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40_3 | 0.61 | 51.0 | 3.47e-01 | 91.9% | 36.4% |
| 3599544 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.60 | 51.0 | 3.33e-01 | 93.2% | 75.8% |
| 3962450 | 9.27.1.0 ↗ | beta barrels › Lipocalins/Streptavidin › LpqH › LpqH | 0.59 | 52.0 | 4.70e-01 | 100.0% | 81.9% |
| 7390 | 219.1.1.6 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Acetyltransf_2 | 0.59 | 48.0 | 3.26e-01 | 89.2% | 86.9% |
| 3678440 | 5.3.1.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-Prism II › beta-Prism II › S_locus_glycop | 0.58 | 49.0 | 4.09e-01 | 97.3% | 100.0% |
| 3276788 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.58 | 49.0 | 4.15e-01 | 94.6% | 96.8% |
| 3953943 | 9.27.1.1 ↗ | beta barrels › Lipocalins/Streptavidin › LpqH › LpqH › Myco_19_kDa | 0.58 | 51.0 | 4.52e-01 | 100.0% | 77.3% |
| 3222419 | 331.23.1.0 ↗ | a+b two layers › TBP-like › Integrator IntS9/IntS11 C-terminal domain › Integrator IntS9/IntS11 C-terminal domain | 0.58 | 43.0 | 4.29e-01 | 95.9% | 77.3% |
| 3174725 | 5.1.3.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed | 0.58 | 45.0 | 2.96e-01 | 89.2% | 43.9% |
| 4949569 | 4312.1.1.3 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like › ParE_toxin | 0.58 | 37.0 | 3.56e-01 | 75.7% | 54.4% |
| 1503842 | 9.27.1.1 ↗ | beta barrels › Lipocalins/Streptavidin › LpqH › LpqH › Myco_19_kDa | 0.57 | 50.0 | 4.38e-01 | 100.0% | 79.8% |
| 3596915 | 2002.1.1.0 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels | 0.57 | 51.0 | 3.01e-01 | 100.0% | 32.8% |
| 3617987 | 4099.1.1.28 ↗ | a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like › PF29108 | 0.57 | 49.0 | 4.74e-01 | 100.0% | 84.7% |
| 3588455 | 274.1.1.0 ↗ | a+b two layers › Pili subunits › Pili subunits › Pili subunits | 0.55 | 38.0 | 3.92e-01 | 74.3% | 75.7% |
| 5037569 | 12.3.1.19 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › Gal_mutarotas_2 | 0.54 | 49.0 | 3.58e-01 | 100.0% | 69.2% |
| 1005590 | 3561.1.1.0 ↗ | a+b complex topology › Mediator of RNA polymerase II transcription subunit 17 › Mediator of RNA polymerase II transcription subunit 17 › Mediator of RNA polymerase II transcription subunit 17 | 0.53 | 44.0 | 2.80e-01 | 93.2% | 20.2% |
| 3282808 | 241.11.1.5 ↗ | a+b two layers › Type III secretory system chaperone-like › YjbR-like › YjbR-like › DUF5655 | 0.51 | 45.0 | 3.85e-01 | 100.0% | 70.2% |