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MW419087.1__QQO41233.1__015DV004_17__00017

Bact-Vir

MW419087.1__QQO41233.1__015DV004_17__00017

Identity

Accession:
MW419087 ↗
Kingdom:
phage

Quality

77.4 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Herelleviridae› Bacillus_phage_015DV004

TaxID: 2801833

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 11-71
PDB
Domain cluster: representative
CATH (43)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1wjrA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.81 64.0 4.92e-01 83.6% 74.8%
3ceyB01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.81 63.0 4.75e-01 83.6% 63.1%
6bhdA03 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.74 54.0 5.42e-01 77.0% 76.2%
4ytlA01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.74 54.0 5.96e-01 78.7% 94.0%
5hk0B00 2.30.30.110 Mainly Beta › Roll › SH3 type barrels. › 0.74 65.0 5.43e-01 100.0% 88.8%
3goxA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.74 55.0 5.96e-01 78.7% 98.0%
7k9cA01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.74 64.0 5.72e-01 96.7% 83.7%
1sf9A02 2.30.30.340 Mainly Beta › Roll › SH3 type barrels. › Hypothetical protein YfhH like domains 0.73 52.0 5.42e-01 80.3% 85.2%
4c5eC02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.73 57.0 4.82e-01 83.6% 79.2%
2vb6A01 2.30.30.360 Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal 0.72 55.0 5.77e-01 80.3% 90.7%
1b7tA02 2.30.30.360 Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal 0.71 53.0 5.66e-01 80.3% 92.3%
2mysA01 2.30.30.360 Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal 0.71 51.0 5.58e-01 78.7% 95.8%
4m4zA01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.71 48.0 5.29e-01 70.5% 100.0%
6bogA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.70 51.0 5.49e-01 78.7% 92.3%
3h8zA02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.70 52.0 5.12e-01 80.3% 75.0%
4x9cD00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.70 50.0 5.06e-01 80.3% 76.7%
4ii1A02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.70 52.0 5.44e-01 78.7% 85.7%
7cfdA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.70 53.0 4.97e-01 80.3% 67.1%
2cudA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.70 53.0 4.86e-01 82.0% 74.7%
4q66D01 6.20.120.50 Special › Other non-globular › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.69 45.0 4.22e-01 73.8% 56.2%
3udcA02 2.30.30.60 Mainly Beta › Roll › SH3 type barrels. › 0.69 48.0 5.13e-01 85.2% 90.0%
5i4eA01 2.30.30.360 Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal 0.69 46.0 5.06e-01 72.1% 91.3%
3fb9B00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.68 52.0 4.69e-01 82.0% 71.4%
2do3A01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.68 51.0 5.52e-01 82.0% 96.1%
3j7yD02 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.68 51.0 4.65e-01 80.3% 70.4%
3h8zA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.68 47.0 5.08e-01 72.1% 91.7%
1lckA01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.68 51.0 5.26e-01 82.0% 100.0%
2rqrA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.67 50.0 4.07e-01 82.0% 51.3%
5ajiB02 2.30.30.60 Mainly Beta › Roll › SH3 type barrels. › 0.66 48.0 5.12e-01 80.3% 94.0%
2rprA00 2.20.25.240 Mainly Beta › Single Sheet › N-terminal domain of TfIIb › 0.66 49.0 4.39e-01 80.3% 75.9%
4iimA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.66 50.0 5.18e-01 82.0% 100.0%
1x6bA01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.66 49.0 4.90e-01 82.0% 92.2%
7u32F02 2.30.30.10 Mainly Beta › Roll › SH3 type barrels. › Integrase, C-terminal domain superfamily, retroviral 0.65 47.0 5.03e-01 77.0% 100.0%
2in5A00 2.40.360.10 Mainly Beta › Beta Barrel › YmcC-like fold › YmcC-like 0.62 47.0 3.30e-01 82.0% 84.1%
4ry2A01 3.90.70.10 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases 0.61 54.0 4.14e-01 100.0% 44.0%
2xanA01 3.30.200.110 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Inositol-pentakisphosphate 2-kinase, N-lobe 0.61 43.0 3.31e-01 75.4% 74.8%
7afrX02 2.30.30.180 Mainly Beta › Roll › SH3 type barrels. › Ribosome maturation factor RimP, C-terminal domain 0.61 45.0 4.60e-01 83.6% 83.3%
1ycyA00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.61 45.0 4.56e-01 82.0% 83.9%
4n4iA02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.60 52.0 4.56e-01 96.7% 92.2%
2hbpA00 2.30.30.700 Mainly Beta › Roll › SH3 type barrels. › SLA1 homology domain 1 0.59 45.0 4.45e-01 85.2% 83.3%
1vr5A01 3.40.190.10 Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II 0.53 36.0 2.73e-01 72.1% 78.2%
3dnsA00 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.51 35.0 2.87e-01 73.8% 58.0%
1wgeA00 3.10.660.10 Alpha Beta › Roll › Microbial ribonuclease fold › DPH Zinc finger 0.51 37.0 3.46e-01 100.0% 60.2%
ECOD (73)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4369736 4.1.1.175 ↗ beta barrels › SH3 › SH3 › SH3 › MSSS 0.86 57.0 6.52e-01 82.0% 93.3%
5042477 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.85 55.0 6.28e-01 75.4% 88.9%
4182977 4.1.1.297 ↗ beta barrels › SH3 › SH3 › SH3 › YajC 0.82 53.0 5.44e-01 78.7% 68.3%
5033075 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.82 60.0 6.33e-01 82.0% 85.5%
5050433 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.82 51.0 5.81e-01 73.8% 86.7%
4950396 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.80 58.0 6.09e-01 85.2% 85.5%
4031578 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.80 53.0 5.78e-01 82.0% 84.0%
5058671 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.79 57.0 6.03e-01 82.0% 85.5%
2581407 241.14.1.0 ↗ a+b two layers › Type III secretory system chaperone-like › SARS-unique domain-C › SARS-unique domain-C 0.79 46.0 4.24e-01 70.5% 46.2%
4992872 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.78 59.0 6.22e-01 82.0% 89.1%
5017214 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.78 60.0 6.24e-01 85.2% 90.9%
4997767 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.78 50.0 5.60e-01 73.8% 88.9%
3981575 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.77 60.0 6.28e-01 85.2% 92.7%
4946165 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.77 57.0 5.96e-01 82.0% 87.3%
3603357 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.77 58.0 6.03e-01 82.0% 89.1%
4550511 4.1.1.175 ↗ beta barrels › SH3 › SH3 › SH3 › MSSS 0.76 48.0 5.40e-01 72.1% 86.7%
4947995 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.76 57.0 5.94e-01 85.2% 89.1%
4952887 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.76 57.0 5.92e-01 85.2% 89.1%
3931805 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.76 53.0 5.81e-01 73.8% 96.0%
5040416 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.75 53.0 5.71e-01 80.3% 90.0%
3622846 4.1.1.33 ↗ beta barrels › SH3 › SH3 › SH3 › Myosin_N 0.74 56.0 6.12e-01 82.0% 98.0%
4003473 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.74 46.0 4.52e-01 70.5% 58.5%
4990212 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.72 56.0 5.87e-01 85.2% 92.7%
3961546 4.1.1.13 ↗ beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd 0.72 53.0 5.23e-01 82.0% 73.8%
3451171 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.72 54.0 5.29e-01 80.3% 80.0%
3400388 708.1.1.4 ↗ beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain › FLYWCH 0.72 49.0 4.87e-01 72.1% 70.8%
3412823 708.1.1.4 ↗ beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain › FLYWCH 0.72 48.0 5.08e-01 70.5% 80.0%
3631165 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.71 56.0 5.01e-01 85.2% 82.4%
5060760 4.1.1.13 ↗ beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd 0.71 52.0 5.14e-01 82.0% 73.8%
3300848 4.1.1.38 ↗ beta barrels › SH3 › SH3 › SH3 › Ribosomal_L2_C 0.71 47.0 3.97e-01 78.7% 40.8%
3457106 4.1.1.42 ↗ beta barrels › SH3 › SH3 › SH3 › Agenet 0.71 53.0 5.22e-01 80.3% 87.7%
3395415 708.1.1.4 ↗ beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain › FLYWCH 0.71 48.0 4.65e-01 72.1% 68.6%
5025079 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.71 53.0 5.49e-01 82.0% 89.1%
3368864 4.1.1.42 ↗ beta barrels › SH3 › SH3 › SH3 › Agenet 0.71 53.0 5.23e-01 80.3% 87.7%
3409941 708.1.1.4 ↗ beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain › FLYWCH 0.70 49.0 4.67e-01 72.1% 68.6%
3402051 708.1.1.4 ↗ beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain › FLYWCH 0.70 48.0 4.46e-01 72.1% 64.1%
4000819 708.1.1.4 ↗ beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain › FLYWCH 0.70 48.0 4.63e-01 72.1% 62.9%
4964421 4.1.1.13 ↗ beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd 0.70 50.0 4.98e-01 80.3% 70.8%
5044373 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.70 55.0 5.60e-01 90.2% 86.7%
4937423 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.70 53.0 4.74e-01 82.0% 75.3%
3415678 708.1.1.4 ↗ beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain › FLYWCH 0.70 48.0 4.66e-01 72.1% 72.1%
5036647 4.1.1.13 ↗ beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd 0.69 52.0 4.97e-01 83.6% 70.0%
4655719 4.1.1.92 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_9 0.69 50.0 4.40e-01 77.0% 71.1%
3992026 708.1.1.4 ↗ beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain › FLYWCH 0.68 47.0 4.65e-01 72.1% 67.7%
3396057 708.1.1.4 ↗ beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain › FLYWCH 0.68 47.0 4.32e-01 72.1% 56.2%
4972872 4.1.1.13 ↗ beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd 0.68 47.0 5.19e-01 80.3% 100.0%
3333322 4.1.1.42 ↗ beta barrels › SH3 › SH3 › SH3 › Agenet 0.68 53.0 4.10e-01 85.2% 45.9%
3395585 708.1.1.4 ↗ beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain › FLYWCH 0.67 47.0 4.60e-01 72.1% 69.2%
3398841 708.1.1.4 ↗ beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain › FLYWCH 0.67 46.0 4.46e-01 72.1% 66.7%
3252765 223.2.1.1 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like › Profilin 0.67 46.0 3.54e-01 72.1% 34.1%
4348606 4.1.1.440 ↗ beta barrels › SH3 › SH3 › SH3 › PF27165 0.66 57.0 5.60e-01 95.1% 92.3%
135919 708.1.1.4 ↗ beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain › FLYWCH 0.66 49.0 4.39e-01 80.3% 75.9%
3273196 223.2.1.1 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like › Profilin 0.66 45.0 3.32e-01 72.1% 28.7%
3778012 708.1.1.4 ↗ beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain › FLYWCH 0.66 49.0 4.40e-01 80.3% 77.6%
3520226 101.1.1.388 ↗ alpha arrays › HTH › HTH › Three-helical HTH › FLYWCH 0.66 49.0 3.83e-01 80.3% 54.6%
4962256 101.1.2.937 ↗ alpha arrays › HTH › HTH › winged helix domain › PF25943 0.65 47.0 3.90e-01 77.0% 67.3%
3402874 708.1.1.4 ↗ beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain › FLYWCH 0.65 45.0 4.44e-01 72.1% 67.7%
3470353 223.2.1.1 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like › Profilin 0.64 41.0 3.22e-01 70.5% 31.2%
3248413 223.2.1.1 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like › Profilin 0.64 41.0 3.20e-01 70.5% 29.6%
3625149 708.1.1.4 ↗ beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain › FLYWCH 0.64 48.0 4.41e-01 80.3% 85.0%
5048098 223.2.1.0 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like 0.64 42.0 3.34e-01 70.5% 33.6%
5048945 223.2.1.0 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like 0.61 42.0 3.32e-01 72.1% 34.4%
5052949 223.2.1.0 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like 0.61 41.0 3.27e-01 72.1% 34.4%
3604264 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.61 43.0 3.69e-01 75.4% 70.0%
5078711 223.2.1.0 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like 0.60 41.0 3.34e-01 72.1% 36.7%
3231154 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.60 50.0 4.65e-01 96.7% 81.2%
3831652 71.1.1.17 ↗ beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › PF28435 0.60 40.0 3.00e-01 72.1% 26.6%
3250283 223.2.1.1 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like › Profilin 0.60 39.0 3.09e-01 72.1% 31.5%
5073723 223.2.1.0 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like 0.59 41.0 3.31e-01 72.1% 37.0%
5049481 223.2.1.0 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like 0.59 40.0 3.24e-01 72.1% 36.6%
2393360 223.2.1.0 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like 0.59 40.0 3.27e-01 72.1% 37.0%
3574587 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.57 41.0 3.62e-01 75.4% 62.2%
4352841 325.1.7.0 ↗ a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif 0.51 36.0 3.38e-01 77.0% 73.8%