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MW419087.1__QQO41454.1__015DV004_239__00239
Bact-VirMW419087.1__QQO41454.1__015DV004_239__00239
Identity
- Accession:
- MW419087 ↗
- Kingdom:
- phage
Quality
86.7
mean pLDDT
Taxonomy
TaxID: 2801833
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 17-63
Domain cluster:
representative
CATH (17)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3d79A01 | 3.10.450.120 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › Pre-PUA domain; domain 1 | 0.68 | 50.0 | 4.37e-01 | 80.9% | 79.7% |
| 2od0A00 | 3.30.1460.30 | Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › YgaC/TfoX-N like chaperone | 0.67 | 52.0 | 3.99e-01 | 85.1% | 81.6% |
| 3fvcA03 | 2.30.29.100 | Mainly Beta › Roll › PH-domain like › | 0.65 | 52.0 | 4.08e-01 | 93.6% | 88.2% |
| 2vzoA03 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.61 | 42.0 | 2.54e-01 | 74.5% | 24.5% |
| 4p72A03 | 3.50.40.10 | Alpha Beta › 3-Layer(bba) Sandwich › Phenylalanyl-tRNA Synthetase; Chain B, domain 3 › Phenylalanyl-trna Synthetase, Chain B, domain 3 | 0.60 | 50.0 | 3.38e-01 | 100.0% | 77.9% |
| 1xkhA01 | 2.170.130.10 | Mainly Beta › Beta Complex › Ferric Hydroxamate Uptake Protein; Chain A, domain 1 › TonB-dependent receptor, plug domain | 0.60 | 43.0 | 3.36e-01 | 76.6% | 96.2% |
| 1wfjA01 | 2.60.40.150 | Mainly Beta › Sandwich › Immunoglobulin-like › C2 domain | 0.60 | 47.0 | 3.57e-01 | 91.5% | 87.9% |
| 4gc1A01 | 2.90.10.10 | Mainly Beta › Orthogonal Prism › Agglutinin, subunit A › Bulb-type lectin domain | 0.58 | 42.0 | 3.28e-01 | 78.7% | 69.2% |
| 3hxlA02 | 2.60.40.4290 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.57 | 43.0 | 3.72e-01 | 93.6% | 74.4% |
| 2rh0A01 | 2.60.40.790 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.55 | 38.0 | 3.49e-01 | 72.3% | 54.7% |
| 2ff4A01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.55 | 41.0 | 3.28e-01 | 83.0% | 94.9% |
| 4okcA01 | 2.90.10.10 | Mainly Beta › Orthogonal Prism › Agglutinin, subunit A › Bulb-type lectin domain | 0.54 | 38.0 | 3.39e-01 | 74.5% | 65.2% |
| 2codA01 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.54 | 41.0 | 3.54e-01 | 97.9% | 72.9% |
| 1o0vA03 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.54 | 38.0 | 3.09e-01 | 80.9% | 58.2% |
| 3gjyA00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.51 | 38.0 | 2.39e-01 | 85.1% | 41.2% |
| 3noyB02 | 3.30.413.10 | Alpha Beta › 2-Layer Sandwich › Sulfite Reductase Hemoprotein; domain 1 › Sulfite Reductase Hemoprotein, domain 1 | 0.51 | 42.0 | 3.39e-01 | 93.6% | 62.1% |
| 2r6iA01 | 3.30.2180.10 | Alpha Beta › 2-Layer Sandwich › ATP12-like › ATP12-like | 0.51 | 38.0 | 3.07e-01 | 83.0% | 75.0% |
ECOD (28)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3604572 | 243.6.1.1 ↗ | a+b two layers › Cystatin-like › Pre-PUA domain › Pre-PUA domain › DUF1947 | 0.70 | 53.0 | 4.66e-01 | 83.0% | 78.6% |
| 4548121 | 243.6.1.9 ↗ | a+b two layers › Cystatin-like › Pre-PUA domain › Pre-PUA domain › TGT_C2 | 0.68 | 53.0 | 4.62e-01 | 83.0% | 80.0% |
| 3284412 | 241.11.1.6 ↗ | a+b two layers › Type III secretory system chaperone-like › YjbR-like › YjbR-like › TfoX_N | 0.68 | 53.0 | 4.13e-01 | 87.2% | 82.9% |
| 5005203 | 243.6.1.9 ↗ | a+b two layers › Cystatin-like › Pre-PUA domain › Pre-PUA domain › TGT_C2 | 0.67 | 51.0 | 4.25e-01 | 83.0% | 72.5% |
| 2162624 | 3894.1.1.1 ↗ | beta meanders › O-GlcNAc transferase GtfA beta-meander domain › O-GlcNAc transferase GtfA beta-meander domain › O-GlcNAc transferase GtfA beta-meander domain › Asp1 | 0.66 | 53.0 | 3.81e-01 | 87.2% | 39.7% |
| 4936682 | 243.6.1.8 ↗ | a+b two layers › Cystatin-like › Pre-PUA domain › Pre-PUA domain › AF_0587-like_pre-PUA | 0.65 | 50.0 | 4.13e-01 | 85.1% | 71.8% |
| 4953037 | 243.6.1.9 ↗ | a+b two layers › Cystatin-like › Pre-PUA domain › Pre-PUA domain › TGT_C2 | 0.63 | 50.0 | 4.33e-01 | 85.1% | 74.7% |
| 5053863 | 2003.1.10.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › PreATP-grasp domain | 0.62 | 44.0 | 3.72e-01 | 76.6% | 94.1% |
| 3838834 | 865.1.1.0 ↗ | beta complex topology › PheT/TilS domain › PheT/TilS domain › PheT/TilS domain | 0.61 | 51.0 | 3.52e-01 | 100.0% | 74.6% |
| 4992949 | 2003.1.10.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › PreATP-grasp domain | 0.61 | 49.0 | 3.92e-01 | 93.6% | 93.0% |
| 5041419 | 243.6.1.9 ↗ | a+b two layers › Cystatin-like › Pre-PUA domain › Pre-PUA domain › TGT_C2 | 0.61 | 46.0 | 3.92e-01 | 85.1% | 68.8% |
| 5042849 | 2003.1.10.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › PreATP-grasp domain | 0.60 | 49.0 | 4.04e-01 | 95.7% | 95.6% |
| 3311947 | 2.1.1.15 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon | 0.59 | 45.0 | 3.24e-01 | 85.1% | 68.6% |
| 4361081 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.58 | 42.0 | 4.29e-01 | 91.5% | 84.4% |
| 5012555 | 2003.1.5.81 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_25 | 0.57 | 41.0 | 2.77e-01 | 80.9% | 45.1% |
| 4947429 | 2003.1.10.37 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › PreATP-grasp domain › RimK | 0.56 | 45.0 | 3.70e-01 | 91.5% | 98.9% |
| 3603325 | 2003.1.5.82 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_31 | 0.56 | 41.0 | 2.63e-01 | 80.9% | 34.9% |
| 4971298 | 319.1.1.0 ↗ | beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones | 0.56 | 45.0 | 3.94e-01 | 91.5% | 72.0% |
| 3739513 | 4351.1.1.1 ↗ | alpha arrays › ATP12-like › ATP12-like › ATP12-like › ATP12 | 0.56 | 40.0 | 2.51e-01 | 76.6% | 95.1% |
| 4200177 | 3894.1.1.3 ↗ | beta meanders › O-GlcNAc transferase GtfA beta-meander domain › O-GlcNAc transferase GtfA beta-meander domain › O-GlcNAc transferase GtfA beta-meander domain › GtfB_M | 0.55 | 47.0 | 3.47e-01 | 100.0% | 46.9% |
| 4180071 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.55 | 39.0 | 4.02e-01 | 91.5% | 86.7% |
| 3259505 | 101.1.2.194 ↗ | alpha arrays › HTH › HTH › winged helix domain › RIOX1_C_WH | 0.55 | 41.0 | 3.24e-01 | 89.4% | 64.7% |
| 3578536 | 319.1.1.3 ↗ | beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › CS | 0.54 | 40.0 | 3.15e-01 | 85.1% | 48.7% |
| 4358227 | 2003.1.5.138 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › UPF0020+Methyltrans_SAM | 0.54 | 36.0 | 2.08e-01 | 72.3% | 15.1% |
| 3800797 | 319.1.1.0 ↗ | beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones | 0.53 | 39.0 | 3.13e-01 | 87.2% | 47.8% |
| 5004361 | 2003.1.10.14 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › PreATP-grasp domain › Rimk_N | 0.52 | 38.0 | 3.21e-01 | 78.7% | 96.7% |
| 3839705 | 325.1.8.0 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Ribosomal L27 protein | 0.52 | 35.0 | 2.90e-01 | 91.5% | 38.8% |
| 3488710 | 319.1.1.5 ↗ | beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › PIH1_CS | 0.51 | 40.0 | 3.34e-01 | 91.5% | 67.8% |