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MW419087.1__QQO41466.1__015DV004_251__00251

Bact-Vir

MW419087.1__QQO41466.1__015DV004_251__00251

Identity

Accession:
MW419087 ↗
Kingdom:
phage

Quality

82.0 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 9-51
PDB
Domain cluster: representative
CATH (65)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2lqjA00 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.78 63.0 4.95e-01 100.0% 42.6%
8a9xA01 3.30.1360.100 Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › General secretion pathway protein M, EpsM 0.76 54.0 4.53e-01 93.0% 44.0%
3a27A00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.75 65.0 4.09e-01 100.0% 20.5%
2bkyX00 3.30.110.20 Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor IF3 › Alba-like domain 0.73 59.0 4.78e-01 93.0% 51.2%
2kigA00 2.30.29.110 Mainly Beta › Roll › PH-domain like › 0.72 58.0 3.99e-01 100.0% 25.5%
1vm0A00 3.30.110.20 Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor IF3 › Alba-like domain 0.72 58.0 4.58e-01 93.0% 45.2%
7r7eA01 3.30.300.30 Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › ANL, C-terminal domain 0.69 56.0 4.24e-01 100.0% 36.1%
4dg8A02 3.30.300.30 Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › ANL, C-terminal domain 0.68 57.0 4.56e-01 100.0% 48.9%
5wpjA02 3.30.70.420 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Hydroxymethylglutaryl-CoA reductase, class I/II, NAD/NADP-binding domain 0.68 58.0 4.37e-01 100.0% 45.4%
1l3iA00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.67 47.0 3.08e-01 74.4% 43.2%
3dr6B00 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.66 46.0 3.02e-01 72.1% 69.2%
4ozjA00 3.30.70.120 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.66 52.0 4.15e-01 100.0% 40.4%
1ygyA04 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.66 54.0 4.56e-01 100.0% 53.9%
1s7mA03 2.20.25.140 Mainly Beta › Single Sheet › N-terminal domain of TfIIb › 0.65 39.0 4.40e-01 93.0% 89.3%
5cm2Z00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.65 57.0 3.71e-01 100.0% 32.6%
2fmaA00 3.30.1490.140 Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › Amyloidogenic glycoprotein, copper-binding domain 0.64 52.0 4.84e-01 100.0% 71.2%
4y6iA00 3.30.70.120 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.64 49.0 4.02e-01 100.0% 47.6%
3luyA03 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.64 50.0 4.19e-01 100.0% 47.2%
7o4xA01 3.30.70.120 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.64 52.0 4.18e-01 100.0% 44.4%
2p8jA00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.64 51.0 3.34e-01 95.3% 34.5%
3bh7B02 3.30.70.141 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Nucleoside diphosphate kinase-like domain 0.63 50.0 3.88e-01 100.0% 48.8%
1i5eA00 3.40.50.2020 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.63 46.0 2.95e-01 79.1% 34.6%
3ahpA00 3.30.70.120 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.63 49.0 3.94e-01 100.0% 82.1%
4e98C00 3.30.70.120 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.63 49.0 3.95e-01 100.0% 46.7%
2onfA01 3.30.300.20 Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › K homology (KH) domain 0.63 52.0 3.80e-01 100.0% 41.0%
3s1tA02 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.63 48.0 4.10e-01 100.0% 50.0%
1nxiA00 3.30.70.970 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RraB-like 0.62 52.0 3.80e-01 97.7% 81.8%
3n0vA01 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.62 48.0 3.99e-01 95.3% 46.4%
6vh5C03 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.61 48.0 3.91e-01 95.3% 44.9%
4kt5C00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.61 44.0 3.58e-01 100.0% 39.8%
3ce8A00 3.30.70.120 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.60 47.0 3.97e-01 100.0% 48.3%
3m2tA02 3.30.360.10 Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 0.60 48.0 3.48e-01 100.0% 77.0%
4ic1D00 3.90.320.10 Alpha Beta › Alpha-Beta Complex › Lambda Exonuclease; Chain A › 0.60 47.0 3.05e-01 88.4% 48.1%
2dt9A02 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.59 48.0 4.13e-01 100.0% 55.7%
4bsjA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.59 48.0 3.64e-01 100.0% 48.0%
4djbA00 3.30.70.2870 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Mastadenovirus E4 ORF3 0.59 49.0 3.73e-01 100.0% 36.4%
2nq2D00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.58 43.0 2.74e-01 95.3% 14.5%
5axmB00 3.30.70.3000 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › tRNA(His) guanylyltransferase (Thg1) 0.58 42.0 2.67e-01 79.1% 16.3%
5b55A01 3.40.50.1100 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.58 44.0 3.04e-01 93.0% 53.7%
4bqqB02 3.90.1750.20 Alpha Beta › Alpha-Beta Complex › Hect, E3 ligase catalytic domain fold › Putative Large Serine Recombinase; Chain B, Domain 2 0.58 42.0 2.76e-01 72.1% 17.9%
3lvtA03 2.60.40.2210 Mainly Beta › Sandwich › Immunoglobulin-like › 0.58 48.0 3.53e-01 100.0% 34.1%
3e9mB02 3.30.360.10 Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 0.58 47.0 3.15e-01 100.0% 23.2%
3e3pA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.58 48.0 4.06e-01 100.0% 64.1%
5yppA00 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.57 45.0 3.80e-01 100.0% 46.7%
5vogA00 3.40.50.2020 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.57 42.0 2.87e-01 81.4% 81.8%
2jlmA00 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.57 43.0 2.98e-01 93.0% 21.5%
5c0oH00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.57 44.0 2.99e-01 100.0% 25.6%
4tyzA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.57 47.0 3.62e-01 97.7% 38.5%
2qswA00 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.56 42.0 3.42e-01 86.0% 42.2%
2znhA03 6.20.40.10 Special › Other non-globular › Porin MspA ribbon fold › 0.56 42.0 4.14e-01 86.0% 93.6%
3bt7A02 2.40.50.1070 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.56 45.0 3.27e-01 100.0% 29.7%
2l2nA00 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.55 43.0 3.77e-01 90.7% 56.3%
4lgvD02 3.30.360.10 Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 0.54 45.0 2.76e-01 95.3% 67.9%
2n3gA00 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.54 44.0 3.81e-01 95.3% 97.2%
3bzwF00 3.40.50.1110 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › SGNH hydrolase 0.53 41.0 2.70e-01 97.7% 80.2%
3kvnA02 2.40.128.130 Mainly Beta › Beta Barrel › Lipocalin › Autotransporter beta-domain 0.52 45.0 2.74e-01 100.0% 97.7%
1v1qA00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.51 38.0 2.99e-01 88.4% 84.5%
1whnA01 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.51 36.0 3.07e-01 93.0% 38.6%
2i79D00 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.51 45.0 3.02e-01 100.0% 42.5%
2v4jB03 3.30.70.20 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.51 37.0 3.47e-01 95.3% 60.0%
2dixA01 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.51 39.0 3.31e-01 88.4% 82.1%
3o27B00 2.10.260.10 Mainly Beta › Ribbon › Pemi-like Protein 1; Chain: D › 0.51 43.0 3.97e-01 95.3% 71.9%
3mpxA02 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.51 36.0 2.99e-01 83.7% 36.1%
3p9aF00 1.10.132.80 Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › 0.51 39.0 2.83e-01 88.4% 73.9%
6qcbA00 2.40.70.10 Mainly Beta › Beta Barrel › Cathepsin D, subunit A; domain 1 › Acid Proteases 0.50 37.0 3.11e-01 93.0% 49.5%
ECOD (83)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4995957 310.3.1.0 a+b two layers › RRF/tRNA synthetase additional domain-like › General secretion pathway protein M (EpsM) periplasmic domain-related › General secretion pathway protein M (EpsM) periplasmic domain-related 0.80 63.0 5.48e-01 100.0% 55.7%
3667432 304.8.1.0 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.80 64.0 5.03e-01 100.0% 42.1%
3645120 304.8.1.55 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT_ACR9_C 0.80 68.0 5.16e-01 100.0% 41.9%
3323771 4011.1.1.0 beta barrels › beta-barrel domain in acetyl-CoA synthetase-like proteins › beta-barrel domain in acetyl-CoA synthetase-like proteins › beta-barrel domain in acetyl-CoA synthetase-like proteins 0.78 63.0 4.50e-01 95.3% 30.4%
5076310 316.1.1.2 a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › NTP_transf_2 0.78 61.0 4.20e-01 93.0% 25.2%
3508353 2484.1.1.1 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › HSP70 0.76 56.0 3.44e-01 79.1% 22.8%
3330535 304.8.1.55 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT_ACR9_C 0.76 63.0 5.39e-01 100.0% 58.7%
5031992 316.1.1.2 a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › NTP_transf_2 0.74 60.0 4.18e-01 95.3% 26.5%
4667221 2003.1.2.8 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FAD_binding_2,Pyr_redox_2 0.71 59.0 3.80e-01 93.0% 53.1%
5043215 304.8.1.82 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › PF27325 0.71 58.0 4.26e-01 100.0% 32.3%
4971602 316.1.1.45 a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › DUF4269 0.71 55.0 3.97e-01 95.3% 27.7%
3262357 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.71 58.0 4.09e-01 97.7% 28.0%
4943953 304.31.1.1 a+b two layers › Alpha-beta plaits › HMG-CoA reductase › NAD-binding domain of HMG-CoA reductase › HMG-CoA_red 0.71 59.0 4.47e-01 100.0% 43.5%
4966859 304.51.1.8 a+b two layers › Alpha-beta plaits › CRISPR transcript (pre-crRNA) processing endoribonuclease-related › CRISPR transcript (pre-crRNA) processing endoribonuclease-related › Cas6b_C 0.71 54.0 4.63e-01 88.4% 66.7%
3250183 4956.1.1.0 a+b two layers › ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit › ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit › ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit 0.70 55.0 4.76e-01 100.0% 54.3%
3666034 225.1.1.7 a+b two layers › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase-like › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › HATPase_c_3 0.70 57.0 4.31e-01 97.7% 37.3%
5051923 304.8.1.12 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT_8 0.70 54.0 5.01e-01 100.0% 65.0%
3602563 2007.1.5.14 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › ATC-like › PF27247 0.70 50.0 3.56e-01 76.7% 92.0%
2755261 2003.1.2.15 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FAD_binding_3 0.69 50.0 3.23e-01 76.7% 96.8%
4941364 330.2.1.0 a+b two layers › dsRBD-like › Ribosome binding protein Y (YfiA homologue) › Ribosome binding protein Y (YfiA homologue) 0.69 55.0 4.30e-01 100.0% 40.0%
5058329 2003.1.5.81 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_25 0.68 60.0 3.76e-01 100.0% 35.0%
3223461 304.8.1.0 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.67 55.0 4.66e-01 100.0% 57.5%
3993716 327.7.1.0 a+b two layers › Alpha-lytic protease prodomain-like › Cation efflux protein cytoplasmic domain-like › Cation efflux protein cytoplasmic domain-like 0.67 53.0 4.75e-01 100.0% 60.0%
4802890 3274.1.1.0 extended segments › N-terminal region in 40S ribosomal protein rpS2 (S5p) › N-terminal region in 40S ribosomal protein rpS2 (S5p) › N-terminal region in 40S ribosomal protein rpS2 (S5p) 0.67 46.0 3.59e-01 72.1% 33.7%
4257110 256.1.1.11 a+b two layers › MTH1598-like › MTH1598-like › MTH1598-like › DUF2536 0.66 52.0 4.92e-01 100.0% 75.0%
4189845 4964.1.1.0 alpha arrays › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › helical bundle in Bacillus stearothermophilus-like DNA polymerase I 0.66 43.0 2.67e-01 95.3% 13.2%
3251044 242.1.1.2 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_2 0.66 47.0 3.26e-01 76.7% 24.0%
4183868 878.1.1.1 a+b two layers › Hypothetical protein MTH677 › Hypothetical protein MTH677 › Hypothetical protein MTH677 › DUF3194 0.66 56.0 4.66e-01 100.0% 54.4%
4958890 304.114.1.0 a+b two layers › Alpha-beta plaits › Family B DNA polymerase insertion domain › Family B DNA polymerase insertion domain 0.65 52.0 4.41e-01 95.3% 58.7%
4954522 878.1.1.1 a+b two layers › Hypothetical protein MTH677 › Hypothetical protein MTH677 › Hypothetical protein MTH677 › DUF3194 0.65 57.0 4.47e-01 100.0% 50.0%
4618987 242.1.1.0 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases 0.65 52.0 3.95e-01 100.0% 36.8%
4564327 878.1.1.1 a+b two layers › Hypothetical protein MTH677 › Hypothetical protein MTH677 › Hypothetical protein MTH677 › DUF3194 0.65 56.0 4.58e-01 100.0% 51.8%
4991990 878.1.1.0 a+b two layers › Hypothetical protein MTH677 › Hypothetical protein MTH677 › Hypothetical protein MTH677 0.65 53.0 4.14e-01 100.0% 41.0%
1144777 4.25.1.0 beta barrels › SH3 › Auxin response factor dimerization domain and ancillary domain › Auxin response factor dimerization domain and ancillary domain 0.65 57.0 4.31e-01 100.0% 73.1%
5050213 192.2.1.87 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › ATP-synt_D 0.65 45.0 2.88e-01 72.1% 17.4%
4980163 2003.1.5.81 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_25 0.65 51.0 3.45e-01 95.3% 22.8%
5028837 304.114.1.0 a+b two layers › Alpha-beta plaits › Family B DNA polymerase insertion domain › Family B DNA polymerase insertion domain 0.64 50.0 4.52e-01 100.0% 60.0%
4047331 221.10.1.1 a+b two layers › beta-Grasp › FdhD/NarQ beta-grasp fold domain › FdhD/NarQ beta-grasp fold domain › FdhD-NarQ 0.64 54.0 4.18e-01 100.0% 42.0%
5045252 878.1.1.1 a+b two layers › Hypothetical protein MTH677 › Hypothetical protein MTH677 › Hypothetical protein MTH677 › DUF3194 0.64 55.0 4.28e-01 100.0% 47.0%
3839035 213.1.1.1 a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_1 0.64 50.0 3.52e-01 93.0% 25.6%
3669809 221.4.1.0 a+b two layers › beta-Grasp › Nudix › Nudix 0.64 48.0 3.60e-01 88.4% 40.8%
4003943 883.1.1.0 a+b complex topology › Aha1/BPI domain-like › Aha1/BPI domain-like › Aha1/BPI domain-like 0.64 51.0 3.71e-01 100.0% 46.0%
5052597 242.1.1.7 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 0.64 50.0 3.70e-01 100.0% 33.6%
5039399 304.114.1.0 a+b two layers › Alpha-beta plaits › Family B DNA polymerase insertion domain › Family B DNA polymerase insertion domain 0.64 49.0 4.32e-01 100.0% 55.0%
5066518 206.1.1.0 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase 0.64 55.0 3.77e-01 100.0% 27.7%
3603739 101.1.1.498 alpha arrays › HTH › HTH › Three-helical HTH › LAGLIDADG_3 0.63 51.0 3.11e-01 100.0% 14.5%
3962429 221.4.1.0 a+b two layers › beta-Grasp › Nudix › Nudix 0.63 49.0 3.70e-01 93.0% 49.2%
3994737 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.63 43.0 2.36e-01 100.0% 4.4%
5026603 256.1.1.1 a+b two layers › MTH1598-like › MTH1598-like › MTH1598-like › Archease 0.63 53.0 3.93e-01 100.0% 36.7%
4972140 242.1.1.0 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases 0.63 49.0 3.59e-01 100.0% 34.7%
4933755 242.1.1.0 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases 0.63 50.0 3.79e-01 100.0% 36.8%
3168821 101.1.10.1 alpha arrays › HTH › HTH › Cyclin-like › Cyclin_N 0.63 45.0 2.65e-01 76.7% 58.5%
4928518 304.51.1.1 a+b two layers › Alpha-beta plaits › CRISPR transcript (pre-crRNA) processing endoribonuclease-related › CRISPR transcript (pre-crRNA) processing endoribonuclease-related › Cas_Cas6_C 0.62 52.0 3.41e-01 100.0% 27.2%
5042516 2008.1.1.235 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › PF26618 0.62 51.0 3.81e-01 100.0% 36.0%
4948152 256.1.1.0 a+b two layers › MTH1598-like › MTH1598-like › MTH1598-like 0.62 52.0 4.54e-01 100.0% 62.9%
4945568 242.1.1.0 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases 0.62 49.0 3.62e-01 100.0% 35.2%
4958551 304.114.1.0 a+b two layers › Alpha-beta plaits › Family B DNA polymerase insertion domain › Family B DNA polymerase insertion domain 0.62 48.0 4.24e-01 100.0% 55.7%
5027887 256.1.1.1 a+b two layers › MTH1598-like › MTH1598-like › MTH1598-like › Archease 0.62 52.0 4.53e-01 100.0% 62.9%
3727458 330.1.1.0 a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like 0.62 46.0 3.83e-01 86.0% 82.4%
3587593 304.8.1.0 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.60 49.0 4.19e-01 100.0% 53.8%
222168 2008.1.1.59 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › PDDEXK_1 0.60 47.0 3.05e-01 88.4% 48.1%
5040659 256.1.1.1 a+b two layers › MTH1598-like › MTH1598-like › MTH1598-like › Archease 0.60 49.0 4.31e-01 100.0% 62.9%
4941725 304.5.1.3 a+b two layers › Alpha-beta plaits › GlnB-like › GlnB-like › CutA1 0.59 45.0 3.77e-01 100.0% 50.0%
3426692 330.1.1.1 a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm 0.57 44.0 3.85e-01 93.0% 93.3%
5012791 2008.1.1.0 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like 0.57 48.0 3.29e-01 97.7% 27.3%
3245175 330.1.1.1 a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm 0.57 43.0 3.47e-01 88.4% 71.6%
4203238 220.1.1.217 beta barrels › PH domain-like › PH domain-like › PH domain-like › PH, GRAM 0.56 43.0 2.74e-01 88.4% 16.4%
5047179 2003.6.1.1 a/b three-layered sandwiches › Rossmann-like › Ribokinase-like › Ribokinase-like › PfkB 0.56 46.0 2.84e-01 93.0% 18.3%
3266298 220.1.1.8 beta barrels › PH domain-like › PH domain-like › PH domain-like › GRAM 0.56 43.0 3.19e-01 88.4% 31.3%
3508781 243.1.1.0 a+b two layers › Cystatin-like › NTF2-like › NTF2-like 0.56 48.0 3.85e-01 100.0% 97.8%
3164763 2004.1.1.99 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Terminase_6N 0.56 42.0 2.81e-01 100.0% 18.0%
3314246 109.4.1.1267 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, DYW_deaminase, E_motif 0.55 39.0 2.44e-01 81.4% 72.7%
3585171 330.1.1.5 a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › DND1_DSRM 0.55 42.0 3.46e-01 88.4% 48.2%
5080307 256.1.1.0 a+b two layers › MTH1598-like › MTH1598-like › MTH1598-like 0.54 41.0 4.10e-01 90.7% 86.7%
3992019 1.1.1.14 beta barrels › cradle loop barrel › RIFT-related › acid protease › DUF1758 0.53 38.0 2.91e-01 83.7% 28.5%
5056727 3926.1.1.1 alpha bundles › V-type proton ATPase subunit D › V-type proton ATPase subunit D › V-type proton ATPase subunit D › ATP-synt_D 0.53 42.0 2.68e-01 86.0% 42.0%
4832854 4186.1.1.1 beta barrels › Ribosomal protein L21p › Ribosomal protein L21p › Ribosomal protein L21p › Ribosomal_L21p 0.53 40.0 3.08e-01 95.3% 58.9%
4298531 239.1.1.5 beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like › tRNA-synt_1c_C 0.52 39.0 3.14e-01 95.3% 83.5%
4489098 2003.2.1.1 a/b three-layered sandwiches › Rossmann-like › Formate dehydrogenase/DMSO reductase, domains 2 and 3 › Formate dehydrogenase/DMSO reductase, domains 2 and 3 › Molybdopterin 0.52 41.0 2.48e-01 97.7% 55.1%
1943097 7524.1.1.1 a/b three-layered sandwiches › ALDH-like › ALDH-like › ALDH-like › Aldedh 0.51 39.0 2.57e-01 93.0% 25.8%
3972091 101.1.2.668 alpha arrays › HTH › HTH › winged helix domain › PF28010 0.51 36.0 3.17e-01 83.7% 46.7%
3646876 4.25.1.0 beta barrels › SH3 › Auxin response factor dimerization domain and ancillary domain › Auxin response factor dimerization domain and ancillary domain 0.50 38.0 3.24e-01 100.0% 81.1%
5048560 2004.1.1.119 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Gtr1_RagA 0.50 44.0 2.89e-01 100.0% 33.3%