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QRD99712.1
Arc-VirMW450817__QRD99712.1__VOLN27-89__00085
Identity
- Accession:
- MW450817 ↗
- Protein ID:
- QRD99712.1 ↗
- Kingdom:
- archaea
Quality
74.6
mean pLDDT
Taxonomy
Heunggongvirae›
Uroviricota›
Caudoviricetes›
Thumleimavirales›
Hafunaviridae›
Haloferacalesvirus›
Halorubrum_virus_VOLN27B
TaxID: 2802002
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 8-51
Domain cluster:
representative
CATH (2)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4pt4B00 | 4.10.520.10 | Few Secondary Structures › Irregular › HU Protein; Chain A › IHF-like DNA-binding proteins | 0.68 | 46.0 | 3.53e-01 | 70.5% | 41.2% |
| 3zbqA00 | 3.40.50.1440 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Tubulin/FtsZ, GTPase domain | 0.63 | 52.0 | 3.17e-01 | 95.5% | 40.0% |
ECOD (10)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4309086 | 5056.1.1.1 ↗ | extended segments › Gated mechanosensitive channel › Gated mechanosensitive channel › Gated mechanosensitive channel › MscL | 0.80 | 55.0 | 3.67e-01 | 72.7% | 21.2% |
| 3706052 | 2488.1.1.18 ↗ | a/b three-layered sandwiches › alpha/beta knot › alpha/beta knot › alpha/beta knot › DTW | 0.78 | 56.0 | 3.31e-01 | 77.3% | 10.9% |
| None | — | 0.65 | 59.0 | 4.23e-01 | 100.0% | 40.0% | |
| 3598294 | 226.1.1.0 ↗ | a+b two layers › POZ domain › POZ domain › POZ domain | 0.65 | 52.0 | 3.73e-01 | 88.6% | 88.8% |
| 3923484 | 4291.1.1.1 ↗ | beta barrels › Oxysterol-binding protein › Oxysterol-binding protein › Oxysterol-binding protein › Oxysterol_BP | 0.64 | 49.0 | 2.97e-01 | 90.9% | 72.5% |
| 4028682 | 102.2.1.0 ↗ | alpha arrays › HhH/H2TH › H2TH › H2TH | 0.63 | 45.0 | 3.25e-01 | 79.5% | 31.4% |
| 4290714 | 109.3.1.162 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank, Ank_2, Ank_5 | 0.62 | 52.0 | 3.37e-01 | 97.7% | 26.8% |
| 3663757 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.60 | 43.0 | 3.79e-01 | 100.0% | 50.8% |
| 3786957 | 4291.1.1.1 ↗ | beta barrels › Oxysterol-binding protein › Oxysterol-binding protein › Oxysterol-binding protein › Oxysterol_BP | 0.59 | 50.0 | 2.87e-01 | 93.2% | 11.3% |
| 4011234 | 4291.1.1.0 ↗ | beta barrels › Oxysterol-binding protein › Oxysterol-binding protein › Oxysterol-binding protein | 0.58 | 49.0 | 2.89e-01 | 93.2% | 12.5% |