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MW452562.1QRE00882.1X__00007

Bact-Vir

MW452562.1__QRE00882.1__X__00007

Identity

Accession:: MW452562 ↗
Kingdom:: phage

Quality

82.1 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Zierdtviridae› Nocardia_phage_NC1

TaxID: 2805752

Cluster

View cluster (8 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 4-128

PDB

Domain cluster: rep: IMGVR_UViG_3300000568_000096-3300000568-Draft_1006303631__D8-117

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF02498.23 best	Bro-N	30.5	6.30e-07	64.8%	83.3%

CATH (6)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
1dq3A04	3.10.28.10	Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases	0.53	35.0	3.71e-01	70.4%	73.7%
4ejoA00	1.10.10.10	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain	0.52	36.0	3.83e-01	89.6%	80.4%
2nnnC00	1.10.10.10	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain	0.52	33.0	3.29e-01	84.0%	59.8%
3l7wA00	1.10.10.10	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain	0.51	37.0	3.95e-01	87.2%	89.5%
5h20A00	1.10.10.10	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain	0.51	34.0	3.72e-01	86.4%	83.5%
1fpqA02	1.10.10.10	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain	0.50	33.0	3.28e-01	78.4%	62.8%

ECOD (16)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3163642	101.1.9.63 ↗	alpha arrays › HTH › HTH › Putative DNA-binding domain › Bro-N	0.77	58.0	6.13e-01	80.8%	88.2%
3978692	101.1.9.143 ↗	alpha arrays › HTH › HTH › Putative DNA-binding domain › Virulence_RhuM	0.76	62.0	5.77e-01	84.8%	78.7%
4033119	101.1.9.63 ↗	alpha arrays › HTH › HTH › Putative DNA-binding domain › Bro-N	0.75	57.0	6.30e-01	82.4%	99.0%
3968916	101.1.9.63 ↗	alpha arrays › HTH › HTH › Putative DNA-binding domain › Bro-N	0.75	54.0	5.86e-01	78.4%	87.6%
3944712	101.1.9.40 ↗	alpha arrays › HTH › HTH › Putative DNA-binding domain › P22_AR_N	0.72	56.0	6.09e-01	82.4%	100.0%
3979592	101.1.9.26 ↗	alpha arrays › HTH › HTH › Putative DNA-binding domain › YfeC-like	0.64	40.0	4.14e-01	72.8%	65.8%
4998593	101.1.9.0 ↗	alpha arrays › HTH › HTH › Putative DNA-binding domain	0.63	46.0	4.76e-01	98.4%	80.9%
5010964	101.1.2.143 ↗	alpha arrays › HTH › HTH › winged helix domain › HTH_34	0.56	34.0	3.69e-01	82.4%	73.0%
4955182	101.1.2.143 ↗	alpha arrays › HTH › HTH › winged helix domain › HTH_34	0.56	37.0	4.11e-01	90.4%	85.0%
3948669	101.1.9.26 ↗	alpha arrays › HTH › HTH › Putative DNA-binding domain › YfeC-like	0.56	35.0	3.62e-01	91.2%	67.0%
4998174	101.1.2.48 ↗	alpha arrays › HTH › HTH › winged helix domain › PadR	0.55	41.0	3.67e-01	90.4%	54.4%
5077851	101.1.2.48 ↗	alpha arrays › HTH › HTH › winged helix domain › PadR	0.55	44.0	4.20e-01	86.4%	82.7%
3261075	206.1.1.0 ↗	a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase	0.53	46.0	3.31e-01	95.2%	85.3%
4999532	101.1.2.48 ↗	alpha arrays › HTH › HTH › winged helix domain › PadR	0.52	39.0	3.23e-01	91.2%	43.0%
4808059	109.28.1.1 ↗	alpha superhelices › Repetitive alpha hairpins › EssB extracellular domain › EssB extracellular domain › YukC	0.51	41.0	3.58e-01	91.2%	90.0%
3628325	327.11.2.0 ↗	a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I)	0.50	23.0	2.98e-01	76.8%	76.9%