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MW452562.1__QRE00947.1__X__00072
Bact-VirMW452562.1__QRE00947.1__X__00072
Identity
- Accession:
- MW452562 ↗
- Kingdom:
- phage
Quality
70.3
mean pLDDT
Taxonomy
TaxID: 2805752
Cluster
View cluster (14 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 10-50
Domain cluster:
rep: OR159667.1__WKW86489.1__SEA_SHROOMBOI_77__00077__D62-101
CATH (15)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3q6bA02 | 3.10.20.310 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › membrane protein fhac | 0.69 | 58.0 | 4.88e-01 | 100.0% | 87.8% |
| 1i1gA02 | 3.30.70.920 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Lrp/AsnC effector binding domain/regulation of amino acid metabolism (RAM) domain | 0.65 | 46.0 | 3.91e-01 | 82.9% | 42.9% |
| 3i24B00 | 3.30.428.10 | Alpha Beta › 2-Layer Sandwich › HIT family, subunit A › HIT-like | 0.63 | 49.0 | 3.63e-01 | 100.0% | 43.2% |
| 2yweA03 | 3.30.70.870 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Elongation Factor G (Translational Gtpase), domain 3 | 0.63 | 47.0 | 4.08e-01 | 100.0% | 48.8% |
| 2kjzA01 | 3.30.720.120 | Alpha Beta › 2-Layer Sandwich › Signal recognition particle alu RNA binding heterodimer, srp9/1 › | 0.59 | 40.0 | 3.76e-01 | 100.0% | 53.7% |
| 4kc9A02 | 1.20.120.1750 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › | 0.58 | 47.0 | 3.03e-01 | 95.1% | 43.4% |
| 3p9dG01 | 1.10.560.10 | Mainly Alpha › Orthogonal Bundle › GROEL; domain 1 › GroEL-like equatorial domain | 0.57 | 47.0 | 2.98e-01 | 100.0% | 44.7% |
| 2o6yA02 | 1.20.200.10 | Mainly Alpha › Up-down Bundle › Fumarase C; Chain A, domain 2 › Fumarase/aspartase (Central domain) | 0.57 | 48.0 | 2.91e-01 | 100.0% | 93.7% |
| 5ig0A00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.56 | 46.0 | 3.32e-01 | 95.1% | 92.4% |
| 1x31B02 | 3.30.9.10 | Alpha Beta › 2-Layer Sandwich › D-Amino Acid Oxidase; Chain A, domain 2 › D-Amino Acid Oxidase, subunit A, domain 2 | 0.55 | 44.0 | 3.15e-01 | 100.0% | 35.1% |
| 3q0bX00 | 2.30.280.10 | Mainly Beta › Roll › PUA domain-like › SRA-YDG | 0.55 | 44.0 | 3.16e-01 | 100.0% | 45.9% |
| 5adxJ01 | 3.90.640.10 | Alpha Beta › Alpha-Beta Complex › Actin; Chain A, domain 4 › ATPase, substrate binding domain, subdomain 4 | 0.55 | 43.0 | 3.32e-01 | 90.2% | 38.7% |
| 2xs2A00 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.52 | 40.0 | 3.39e-01 | 100.0% | 47.1% |
| 2krbA00 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.52 | 40.0 | 3.44e-01 | 100.0% | 51.9% |
| 3lvqE02 | 1.25.40.950 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.51 | 34.0 | 3.02e-01 | 73.2% | 63.5% |
ECOD (23)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4042262 | 3121.1.1.1 ↗ | a+b duplicates or obligate multimers › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain › POTRA | 0.67 | 57.0 | 4.69e-01 | 100.0% | 82.5% |
| 3783976 | 192.2.1.2 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin | 0.66 | 47.0 | 3.66e-01 | 73.2% | 90.0% |
| 4023956 | 3871.1.1.1 ↗ | alpha duplicates or obligate multimers › PHIST › PHIST › PHIST › PRESAN | 0.64 | 50.0 | 3.52e-01 | 85.4% | 29.2% |
| 4337983 | 601.7.1.40 ↗ | alpha bundles › Four-helical up-and-down bundle › HEPN › Nucleotidyltransferase substrate binding subunit/domain › Cas13a_C | 0.64 | 47.0 | 2.60e-01 | 80.5% | 34.3% |
| 4028080 | 148.1.3.8 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › ClpB_D2-small | 0.62 | 51.0 | 4.01e-01 | 95.1% | 63.2% |
| 5032993 | 2003.1.5.66 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_11 | 0.62 | 54.0 | 3.41e-01 | 100.0% | 48.0% |
| 3247604 | 323.1.1.3 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › AMP-binding | 0.62 | 41.0 | 2.76e-01 | 70.7% | 49.7% |
| 5025477 | 2003.1.5.42 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_21 | 0.61 | 52.0 | 3.57e-01 | 97.6% | 29.0% |
| 4454794 | 4207.1.2.0 ↗ | alpha duplicates or obligate multimers › Mediator hinge subcomplex-like › Mediator hinge subcomplex-like › MED7 hinge region | 0.60 | 43.0 | 2.92e-01 | 92.7% | 20.7% |
| 3959233 | 3754.1.1.1 ↗ | alpha bundles › Bacterial cell wall synthesis membrane enzyme MraY-related › Bacterial cell wall synthesis membrane enzyme MraY-related › Bacterial cell wall synthesis membrane enzyme MraY-related › Glycos_transf_4 | 0.60 | 50.0 | 3.16e-01 | 95.1% | 88.1% |
| 4998402 | 242.1.1.0 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases | 0.59 | 49.0 | 3.88e-01 | 100.0% | 48.4% |
| 3723860 | 387.1.5.0 ↗ | few secondary structure elements › omega toxin-like › omega toxin-related › Scorpion toxin-like | 0.58 | 44.0 | 4.42e-01 | 95.1% | 88.9% |
| 3509317 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.58 | 49.0 | 3.59e-01 | 100.0% | 78.3% |
| 3768060 | 216.1.1.1 ↗ | a+b two layers › UBC-like › UBC-like › UBC-like › UQ_con | 0.57 | 46.0 | 2.89e-01 | 92.7% | 43.2% |
| 3987312 | 148.1.3.8 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › ClpB_D2-small | 0.57 | 46.0 | 3.66e-01 | 95.1% | 83.3% |
| 3660861 | 387.1.5.0 ↗ | few secondary structure elements › omega toxin-like › omega toxin-related › Scorpion toxin-like | 0.55 | 42.0 | 3.94e-01 | 100.0% | 67.8% |
| 3326552 | 148.1.3.8 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › ClpB_D2-small | 0.53 | 40.0 | 3.24e-01 | 95.1% | 73.0% |
| 5055281 | 7584.1.1.0 ↗ | a/b three-layered sandwiches › Rossmann-like domain in Acetyl-CoA synthetase-like proteins › Rossmann-like domain in Acetyl-CoA synthetase-like proteins › Rossmann-like domain in Acetyl-CoA synthetase-like proteins | 0.53 | 45.0 | 2.79e-01 | 100.0% | 26.4% |
| 4558328 | 270.1.1.2 ↗ | beta barrels › FMT C-terminal domain-like › FMT C-terminal domain-related › FMT C-terminal domain-related › Formyl_trans_C | 0.53 | 41.0 | 3.23e-01 | 100.0% | 67.0% |
| 3775678 | 2484.1.1.2 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Actin | 0.52 | 38.0 | 2.50e-01 | 90.2% | 77.2% |
| 5001529 | 205.1.1.16 ↗ | a+b two layers › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › Fer4_7 | 0.51 | 35.0 | 2.94e-01 | 100.0% | 35.8% |
| 3527717 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.51 | 34.0 | 3.28e-01 | 70.7% | 86.8% |
| 3941364 | 304.9.1.36 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › RRM_10 | 0.51 | 36.0 | 3.00e-01 | 100.0% | 37.1% |