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MW460245.1__QRE00181.1__X__00138
Bact-VirMW460245.1__QRE00181.1__X__00138
Identity
- Accession:
- MW460245 ↗
- Kingdom:
- phage
Quality
82.0
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 11-59
Domain cluster:
representative
CATH (48)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4gf3A00 | 3.30.1460.10 | Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › | 0.74 | 54.0 | 4.05e-01 | 79.6% | 38.2% |
| 2r55A00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.73 | 63.0 | 4.16e-01 | 100.0% | 76.9% |
| 3r7wB02 | 3.30.450.190 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › | 0.73 | 63.0 | 4.73e-01 | 100.0% | 40.7% |
| 2a2jA00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.69 | 54.0 | 3.65e-01 | 89.8% | 94.6% |
| 3ovcA01 | 3.30.200.150 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › | 0.69 | 50.0 | 4.51e-01 | 79.6% | 90.1% |
| 2grgA01 | 3.40.1840.10 | Alpha Beta › 3-Layer(aba) Sandwich › Profilin-like › YNR034W-A-like | 0.69 | 52.0 | 4.53e-01 | 100.0% | 51.8% |
| 3k1lA01 | 3.30.457.40 | Alpha Beta › 2-Layer Sandwich › Copper Amine Oxidase; Chain A, domain 1 › | 0.68 | 46.0 | 3.80e-01 | 71.4% | 54.3% |
| 2qcuA02 | 3.30.9.10 | Alpha Beta › 2-Layer Sandwich › D-Amino Acid Oxidase; Chain A, domain 2 › D-Amino Acid Oxidase, subunit A, domain 2 | 0.66 | 48.0 | 3.35e-01 | 77.6% | 39.8% |
| 1sbkA00 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.66 | 49.0 | 3.66e-01 | 83.7% | 62.0% |
| 1milA00 | 3.30.505.10 | Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain | 0.65 | 50.0 | 3.90e-01 | 89.8% | 39.4% |
| 4aghA00 | 2.30.31.10 | Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › Transcriptional Coactivator Pc4; Chain A | 0.64 | 42.0 | 3.61e-01 | 71.4% | 41.2% |
| 1s7jA02 | 3.10.310.10 | Alpha Beta › Roll › Diaminopimelate Epimerase; Chain A, domain 1 › Diaminopimelate Epimerase; Chain A, domain 1 | 0.63 | 52.0 | 3.91e-01 | 98.0% | 35.6% |
| 2x0qA01 | 3.30.310.280 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › | 0.63 | 54.0 | 4.01e-01 | 100.0% | 48.9% |
| 5cw7B00 | 3.30.2310.20 | Alpha Beta › 2-Layer Sandwich › YaeB-like fold › RelE-like | 0.63 | 52.0 | 4.34e-01 | 100.0% | 52.1% |
| 1mdaH00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.63 | 51.0 | 3.05e-01 | 91.8% | 15.2% |
| 4nehA01 | 2.130.10.130 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › Integrin alpha, N-terminal | 0.62 | 45.0 | 2.72e-01 | 81.6% | 15.6% |
| 3mx7A00 | 2.40.128.180 | Mainly Beta › Beta Barrel › Lipocalin › | 0.62 | 53.0 | 4.41e-01 | 100.0% | 82.2% |
| 4ml0B00 | 3.30.2310.20 | Alpha Beta › 2-Layer Sandwich › YaeB-like fold › RelE-like | 0.62 | 51.0 | 4.33e-01 | 100.0% | 61.1% |
| 3u1wA01 | 3.10.450.360 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.62 | 48.0 | 3.25e-01 | 85.7% | 32.2% |
| 4j87A00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.61 | 50.0 | 3.09e-01 | 95.9% | 25.9% |
| 4l68A01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.61 | 51.0 | 4.05e-01 | 100.0% | 87.3% |
| 2fm8B00 | 3.30.1460.10 | Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › | 0.61 | 45.0 | 3.34e-01 | 79.6% | 33.6% |
| 3ow8C00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.61 | 50.0 | 3.11e-01 | 95.9% | 20.0% |
| 3c4sA00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.61 | 42.0 | 4.02e-01 | 81.6% | 63.2% |
| 4agiA00 | 2.120.10.70 | Mainly Beta › 6 Propeller › Neuraminidase › Fucose-specific lectin | 0.60 | 47.0 | 2.94e-01 | 89.8% | 22.9% |
| 3s27B01 | 3.10.450.330 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.59 | 49.0 | 3.73e-01 | 100.0% | 74.4% |
| 1p9rA01 | 3.30.450.90 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › | 0.59 | 51.0 | 3.96e-01 | 100.0% | 84.7% |
| 6j8yC00 | 3.70.10.10 | Alpha Beta › Box › Proliferating Cell Nuclear Antigen › | 0.59 | 46.0 | 2.98e-01 | 89.8% | 92.5% |
| 2dx0B01 | 3.30.505.10 | Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain | 0.59 | 47.0 | 4.14e-01 | 89.8% | 58.7% |
| 2pt7C01 | 3.30.450.90 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › | 0.59 | 48.0 | 3.88e-01 | 98.0% | 92.5% |
| 5hr9A01 | 3.30.460.10 | Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › Beta Polymerase, domain 2 | 0.57 | 43.0 | 3.53e-01 | 87.8% | 94.4% |
| 3vpbE00 | 2.20.28.160 | Mainly Beta › Single Sheet › Rubrerythrin, domain 2 › | 0.57 | 42.0 | 4.14e-01 | 100.0% | 75.0% |
| 2lc4A00 | 2.30.30.830 | Mainly Beta › Roll › SH3 type barrels. › | 0.57 | 44.0 | 3.48e-01 | 87.8% | 83.8% |
| 1uypA01 | 2.115.10.20 | Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 | 0.56 | 45.0 | 2.85e-01 | 89.8% | 25.8% |
| 3frnA01 | 3.10.129.70 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › | 0.56 | 41.0 | 3.17e-01 | 87.8% | 91.4% |
| 2joiA00 | 3.30.310.190 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › | 0.55 | 44.0 | 3.67e-01 | 93.9% | 57.3% |
| 6x6aA01 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.55 | 45.0 | 2.92e-01 | 100.0% | 98.9% |
| 1sxjH02 | 3.10.150.10 | Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 | 0.55 | 46.0 | 3.49e-01 | 100.0% | 96.1% |
| 3fqmA02 | 2.20.25.220 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › Hepatitis C virus NS5A, 1B domain | 0.54 | 36.0 | 3.17e-01 | 71.4% | 91.9% |
| 6l4qB01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.54 | 43.0 | 3.29e-01 | 98.0% | 74.1% |
| 3qpbF00 | 3.40.50.1580 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nucleoside phosphorylase domain | 0.53 | 45.0 | 2.91e-01 | 98.0% | 24.3% |
| 1t6lA00 | 3.70.10.10 | Alpha Beta › Box › Proliferating Cell Nuclear Antigen › | 0.53 | 41.0 | 2.70e-01 | 91.8% | 91.2% |
| 4mchA00 | 3.40.50.1580 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nucleoside phosphorylase domain | 0.52 | 44.0 | 2.85e-01 | 95.9% | 21.8% |
| 5wt7A00 | 2.30.180.10 | Mainly Beta › Roll › FAS1 domain › FAS1 domain | 0.52 | 41.0 | 3.15e-01 | 98.0% | 69.3% |
| 6k5gA01 | 3.40.50.1580 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nucleoside phosphorylase domain | 0.51 | 43.0 | 2.72e-01 | 100.0% | 17.9% |
| 2wb8A01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.51 | 40.0 | 3.02e-01 | 100.0% | 82.6% |
| 1k8kD02 | 3.30.1460.20 | Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › | 0.51 | 38.0 | 3.10e-01 | 100.0% | 87.8% |
| 2qm4A01 | 2.170.210.10 | Mainly Beta › Beta Complex › Dna Repair Protein Xrcc4; Chain: A, domain 1 › DNA double-strand break repair and VJ recombination XRCC4, N-terminal | 0.50 | 44.0 | 3.18e-01 | 100.0% | 42.7% |
ECOD (52)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3967510 | 3454.1.1.0 ↗ | beta barrels › GspC HR domain/PilP-like › GspC HR domain/PilP-like › GspC HR domain/PilP-like | 0.76 | 50.0 | 4.41e-01 | 71.4% | 47.1% |
| 3168516 | 223.2.1.10 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like › Gtr1_RagA | 0.75 | 67.0 | 4.68e-01 | 100.0% | 45.3% |
| 4266074 | 394.1.1.1 ↗ | few secondary structure elements › Invertebrate chitin-binding proteins › Invertebrate chitin-binding proteins › Invertebrate chitin-binding proteins › CBM_14 | 0.72 | 52.0 | 4.89e-01 | 89.8% | 63.3% |
| 3941391 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.71 | 48.0 | 4.53e-01 | 71.4% | 68.3% |
| 6632 | 241.1.1.1 ↗ | a+b two layers › Type III secretory system chaperone-like › Type III secretory system chaperone › Type III secretory system chaperone › Invas_SpaK | 0.68 | 51.0 | 3.72e-01 | 81.6% | 38.1% |
| 1171967 | 66.1.1.0 ↗ | beta sandwiches › ISP domain › ISP domain › ISP domain | 0.67 | 50.0 | 5.32e-01 | 100.0% | 97.6% |
| 3701779 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.67 | 58.0 | 4.01e-01 | 100.0% | 33.3% |
| 1512998 | 3953.1.1.1 ↗ | a+b two layers › Csd3 N-terminal domain › Csd3 N-terminal domain › Csd3 N-terminal domain › Csd3_N | 0.64 | 51.0 | 4.31e-01 | 89.8% | 84.7% |
| 3663339 | 331.4.1.7 ↗ | a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 › DUF1499 | 0.63 | 55.0 | 3.87e-01 | 100.0% | 63.9% |
| 3512462 | 214.1.1.10 ↗ | a+b two layers › SH2 › SH2 › SH2 › DUF7145 | 0.62 | 46.0 | 3.56e-01 | 89.8% | 33.3% |
| 3959969 | 3270.1.1.1 ↗ | a+b two layers › a+b domain in heme oxygenase › a+b domain in heme oxygenase › a+b domain in heme oxygenase › DUF2470 | 0.62 | 42.0 | 3.49e-01 | 71.4% | 57.8% |
| 3690077 | 2003.1.2.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain | 0.62 | 43.0 | 2.75e-01 | 73.5% | 23.8% |
| 3244701 | 316.1.1.0 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase | 0.62 | 47.0 | 3.29e-01 | 87.8% | 53.3% |
| 4485741 | 5.1.5.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › WD40 | 0.62 | 50.0 | 2.80e-01 | 95.9% | 9.2% |
| 3201539 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.61 | 53.0 | 3.46e-01 | 95.9% | 35.5% |
| 3414808 | 214.1.1.1 ↗ | a+b two layers › SH2 › SH2 › SH2 › SH2 | 0.61 | 49.0 | 3.67e-01 | 89.8% | 35.8% |
| 4212381 | 227.1.1.6 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C | 0.61 | 53.0 | 3.88e-01 | 100.0% | 90.4% |
| 3622645 | 4184.1.1.2 ↗ | beta barrels › MFPT repeat › MFPT repeat › MFPT repeat › MFP2b | 0.61 | 44.0 | 3.65e-01 | 81.6% | 49.5% |
| 3605532 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.60 | 51.0 | 3.05e-01 | 95.9% | 18.0% |
| 3508120 | 214.1.1.10 ↗ | a+b two layers › SH2 › SH2 › SH2 › DUF7145 | 0.60 | 45.0 | 3.48e-01 | 89.8% | 34.8% |
| 682 | 4184.1.1.2 ↗ | beta barrels › MFPT repeat › MFPT repeat › MFPT repeat › MFP2b | 0.60 | 45.0 | 3.68e-01 | 83.7% | 49.5% |
| 3168104 | 5.1.5.52 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › EMC1_C | 0.59 | 49.0 | 2.74e-01 | 98.0% | 25.6% |
| 3918876 | 5.1.4.295 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40, Beta-prop_DCAF12 | 0.59 | 48.0 | 2.78e-01 | 95.9% | 12.1% |
| 3282977 | 300.1.1.12 ↗ | a+b three layers › Phospholipase D/nuclease › Phospholipase D/nuclease › Phospholipase D/nuclease › DUF5753 | 0.59 | 47.0 | 3.24e-01 | 91.8% | 78.8% |
| 3509350 | 214.1.1.10 ↗ | a+b two layers › SH2 › SH2 › SH2 › DUF7145 | 0.59 | 45.0 | 3.29e-01 | 89.8% | 30.6% |
| 3788355 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.59 | 48.0 | 2.85e-01 | 95.9% | 15.2% |
| 3616471 | 206.1.1.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase | 0.58 | 41.0 | 2.56e-01 | 75.5% | 25.0% |
| 3977938 | 4312.1.1.0 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like | 0.57 | 49.0 | 4.42e-01 | 100.0% | 71.4% |
| 4998585 | 227.1.1.6 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C | 0.57 | 48.0 | 3.72e-01 | 100.0% | 95.0% |
| 3803611 | 206.1.1.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase | 0.57 | 46.0 | 2.86e-01 | 100.0% | 28.8% |
| 3479101 | 241.6.1.0 ↗ | a+b two layers › Type III secretory system chaperone-like › Arp2/3 complex subunits › Arp2/3 complex subunits | 0.57 | 48.0 | 3.61e-01 | 95.9% | 44.2% |
| 4123857 | 391.1.2.0 ↗ | few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › VWC domain-related | 0.56 | 38.0 | 4.08e-01 | 85.7% | 90.0% |
| 3698212 | 2003.1.2.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain | 0.56 | 39.0 | 2.39e-01 | 73.5% | 29.9% |
| 3700578 | 708.1.1.0 ↗ | beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain | 0.56 | 44.0 | 4.22e-01 | 91.8% | 98.3% |
| 3873763 | 391.1.2.0 ↗ | few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › VWC domain-related | 0.56 | 39.0 | 4.10e-01 | 85.7% | 90.0% |
| 4029049 | 2004.1.1.250 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Kinesin,Microtub_bd | 0.56 | 39.0 | 2.41e-01 | 75.5% | 86.8% |
| 3173175 | 239.3.1.1 ↗ | beta barrels › Ribosomal protein L25-like › FAS1 domain › FAS1 domain › Fasciclin | 0.55 | 49.0 | 3.57e-01 | 100.0% | 84.3% |
| 3230503 | 5.1.3.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed | 0.55 | 48.0 | 3.23e-01 | 100.0% | 26.8% |
| 4943724 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.55 | 46.0 | 2.79e-01 | 98.0% | 14.3% |
| 3268619 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.55 | 44.0 | 3.11e-01 | 91.8% | 55.3% |
| 1952982 | 316.1.1.4 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › NTP_transf_2,DNA_pol_B_thumb | 0.54 | 42.0 | 2.98e-01 | 89.8% | 61.8% |
| 3681619 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.54 | 42.0 | 2.76e-01 | 100.0% | 17.0% |
| 1952984 | 316.1.1.23 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › DNA_pol_B_thumb | 0.53 | 39.0 | 2.88e-01 | 89.8% | 55.9% |
| 3692073 | 4.1.1.92 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_9 | 0.53 | 38.0 | 3.44e-01 | 77.6% | 71.4% |
| 4011809 | 206.1.1.11 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › APH | 0.53 | 39.0 | 2.36e-01 | 87.8% | 23.3% |
| 5035119 | 331.16.1.1 ↗ | a+b two layers › TBP-like › TA0095-like › TA0095-like › DUF5611 | 0.53 | 42.0 | 3.56e-01 | 93.9% | 58.9% |
| 3762791 | 913.1.1.9 ↗ | few secondary structure elements › Hormone receptor domain (HRM, Pfam 02793) › Hormone receptor domain (HRM, Pfam 02793) › Hormone receptor domain (HRM, Pfam 02793) › PF27521 | 0.53 | 38.0 | 3.94e-01 | 81.6% | 86.7% |
| 4528718 | 10.1.1.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases | 0.52 | 39.0 | 2.74e-01 | 89.8% | 34.1% |
| 1387073 | 227.1.1.6 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C | 0.52 | 36.0 | 3.00e-01 | 73.5% | 59.3% |
| 3608730 | 601.23.1.4 ↗ | alpha bundles › Four-helical up-and-down bundle › DNA repair protein MutS, domain III › DNA repair protein MutS, domain III › MutS_IV, MutS_III | 0.52 | 40.0 | 2.49e-01 | 89.8% | 85.8% |
| 3422058 | 5.1.3.144 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › b-prop_At3g26010-like | 0.52 | 40.0 | 2.69e-01 | 98.0% | 28.8% |
| 3370517 | 109.1.1.6 ↗ | alpha superhelices › Repetitive alpha hairpins › Glutathione S-transferase (GST)-C › Glutathione S-transferase (GST)-C › GST_C_2 | 0.50 | 40.0 | 2.80e-01 | 87.8% | 31.2% |