Back to structures

MW460245.1__QRE00277.1__X__00234

Bact-Vir

MW460245.1__QRE00277.1__X__00234

Identity

Accession:
MW460245 ↗
Kingdom:
phage

Quality

88.2 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 31-87_366-542
PDB
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF04984.20 best Phage_sheath_1 37.6 2.80e-09 73.5% 95.8%
D2 high residues 96-165_283-357
PDB
CATH (4)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3hxlA02 2.60.40.4290 Mainly Beta › Sandwich › Immunoglobulin-like › 0.81 43.0 5.52e-01 100.0% 85.6%
3lmlA03 2.60.40.4290 Mainly Beta › Sandwich › Immunoglobulin-like › 0.78 44.0 5.67e-01 100.0% 94.1%
2z4hA01 2.40.128.300 Mainly Beta › Beta Barrel › Lipocalin › NlpE, N-terminal domain 0.54 29.0 3.74e-01 87.6% 92.4%
2retA00 3.30.1300.30 Alpha Beta › 2-Layer Sandwich › Pantoate--beta-alanine Ligase; Chain: A,domain 2 › GSPII I/J protein-like 0.53 27.0 3.35e-01 93.8% 79.8%
ECOD (5)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4995821 3629.1.1.0 beta sandwiches › Tail sheath protein beta-sandwich domain › Tail sheath protein beta-sandwich domain › Tail sheath protein beta-sandwich domain 0.78 74.0 7.12e-01 100.0% 91.9%
358962 4401.1.1.1 a+b complex topology › Domain II in tail sheath protein Gp18 › Domain II in tail sheath protein Gp18 › Domain II in tail sheath protein Gp18 › Phage_sheath_domII 0.68 57.0 5.42e-01 87.6% 88.1%
4457428 2.4.1.11 beta barrels › OB-fold › MOP-like › MOP-like › TOBE_3 0.51 27.0 3.05e-01 99.3% 64.5%
3255563 216.1.1.10 a+b two layers › UBC-like › UBC-like › UBC-like › FANCL_d3 0.51 31.0 3.45e-01 86.2% 78.2%
3264749 2008.1.1.0 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like 0.50 43.0 3.63e-01 91.7% 85.8%
D3 high residues 176-268
PDB
CATH (72)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3o0lA00 2.60.40.3230 Mainly Beta › Sandwich › Immunoglobulin-like › 0.74 52.0 4.89e-01 73.1% 61.5%
4hsaF02 2.60.40.2150 Mainly Beta › Sandwich › Immunoglobulin-like › Interleukin-17 receptor A/B, fibronectin-III-like domain 2 0.73 57.0 5.49e-01 82.8% 80.0%
6x3aA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.72 53.0 5.18e-01 78.5% 83.7%
1l9nA03 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.71 56.0 5.28e-01 84.9% 80.7%
1kv3A03 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.69 56.0 5.17e-01 87.1% 82.1%
5z9sA03 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.69 52.0 4.76e-01 80.6% 78.0%
1g0dA03 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.69 55.0 5.26e-01 87.1% 83.6%
4ypjA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.68 55.0 5.09e-01 87.1% 73.1%
1ex0A03 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.68 55.0 5.14e-01 87.1% 83.3%
6rptC00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.68 55.0 5.15e-01 87.1% 78.6%
3bgaA04 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.67 54.0 5.23e-01 87.1% 89.5%
2je8A04 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.67 54.0 5.24e-01 87.1% 85.3%
2vzsA04 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.66 54.0 4.90e-01 88.2% 68.3%
7uzsX03 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.66 53.0 4.92e-01 86.0% 79.1%
2zaiB03 2.60.40.3020 Mainly Beta › Sandwich › Immunoglobulin-like › 0.66 52.0 4.96e-01 87.1% 73.8%
7rskA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.66 53.0 5.10e-01 88.2% 80.7%
5fmvA01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.65 46.0 4.85e-01 79.6% 82.1%
5jtwA03 2.60.40.1940 Mainly Beta › Sandwich › Immunoglobulin-like › 0.65 52.0 4.73e-01 87.1% 79.5%
2r5oA01 2.70.50.60 Mainly Beta › Distorted Sandwich › Coagulation Factor XIII; Chain A, domain 1 › abc- transporter (atp binding component) like domain 0.65 52.0 4.43e-01 87.1% 60.9%
3bgaA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.65 52.0 4.93e-01 87.1% 80.2%
3hlkA01 2.60.40.2240 Mainly Beta › Sandwich › Immunoglobulin-like › Acyl-CoA thioester hydrolase/BAAT N-terminal domain 0.65 52.0 4.56e-01 86.0% 80.7%
3fn9A02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.64 50.0 4.68e-01 84.9% 75.0%
4kkpA02 2.60.40.3880 Mainly Beta › Sandwich › Immunoglobulin-like › 0.64 51.0 4.85e-01 87.1% 72.6%
4kh9A01 2.60.40.3870 Mainly Beta › Sandwich › Immunoglobulin-like › Uncharacterised protein PF16024, DUF4785 0.64 52.0 4.63e-01 88.2% 62.9%
2wb7A02 2.60.40.2050 Mainly Beta › Sandwich › Immunoglobulin-like › 0.63 51.0 4.31e-01 87.1% 75.5%
5z1aA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.63 51.0 4.74e-01 88.2% 77.1%
4l1dC00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.63 49.0 4.66e-01 82.8% 98.2%
1qg3A02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.63 51.0 4.91e-01 87.1% 78.8%
5dmyA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.63 50.0 4.63e-01 88.2% 77.7%
1x4xA00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.62 46.0 4.40e-01 80.6% 67.9%
3up6A01 2.60.40.2580 Mainly Beta › Sandwich › Immunoglobulin-like › 0.62 54.0 4.56e-01 100.0% 87.3%
1qppA01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.62 51.0 4.74e-01 88.2% 78.1%
6kxkG01 2.60.40.150 Mainly Beta › Sandwich › Immunoglobulin-like › C2 domain 0.61 53.0 4.79e-01 100.0% 88.0%
7ui8A01 2.60.40.3930 Mainly Beta › Sandwich › Immunoglobulin-like › 0.61 43.0 4.20e-01 74.2% 71.6%
3e9tB00 2.60.40.2030 Mainly Beta › Sandwich › Immunoglobulin-like › CalX-beta domain 0.61 49.0 4.61e-01 87.1% 78.8%
7uwjC01 2.60.40.2160 Mainly Beta › Sandwich › Immunoglobulin-like › Interleukin-17 receptor A/B, fibronectin-III-like domain 1 0.60 47.0 4.33e-01 84.9% 100.0%
3b7yA00 2.60.40.150 Mainly Beta › Sandwich › Immunoglobulin-like › C2 domain 0.60 53.0 4.64e-01 100.0% 78.5%
1acxA00 2.60.40.230 Mainly Beta › Sandwich › Immunoglobulin-like › Neocarzinostatin-like 0.60 48.0 4.59e-01 87.1% 85.2%
1ueyA00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.59 48.0 4.35e-01 88.2% 63.8%
2q3xA00 2.60.40.150 Mainly Beta › Sandwich › Immunoglobulin-like › C2 domain 0.59 52.0 4.59e-01 100.0% 71.1%
2jdaB00 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.59 44.0 3.87e-01 84.9% 52.1%
1w15A00 2.60.40.150 Mainly Beta › Sandwich › Immunoglobulin-like › C2 domain 0.59 51.0 4.64e-01 100.0% 84.8%
5jtwA01 2.60.40.1930 Mainly Beta › Sandwich › Immunoglobulin-like › Macroglobulin (MG2) domain 0.58 51.0 4.53e-01 100.0% 81.3%
2enqA00 2.60.40.150 Mainly Beta › Sandwich › Immunoglobulin-like › C2 domain 0.58 51.0 4.35e-01 100.0% 86.1%
1s3rA04 2.60.40.1430 Mainly Beta › Sandwich › Immunoglobulin-like › Perfringolysin, domain 4 0.58 52.0 4.93e-01 100.0% 91.9%
1p7hL02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.58 46.0 4.45e-01 87.1% 78.5%
2fauA01 2.60.40.640 Mainly Beta › Sandwich › Immunoglobulin-like › 0.58 46.0 3.97e-01 87.1% 68.9%
2jvuA00 2.60.40.2290 Mainly Beta › Sandwich › Immunoglobulin-like › 0.58 41.0 4.10e-01 75.3% 77.6%
3tiiB02 3.30.470.20 Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › ATP-grasp fold, B domain 0.57 44.0 3.49e-01 80.6% 65.4%
1djxA03 2.60.40.150 Mainly Beta › Sandwich › Immunoglobulin-like › C2 domain 0.57 50.0 4.53e-01 100.0% 82.4%
7tzeA01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.57 43.0 4.12e-01 80.6% 84.4%
2x5pA00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.57 50.0 4.86e-01 96.8% 86.5%
5l73A00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.57 44.0 3.61e-01 96.8% 44.3%
2vm9A01 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.57 44.0 3.78e-01 90.3% 50.6%
3nziA01 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.57 45.0 4.37e-01 86.0% 78.3%
4msvA01 2.60.120.40 Mainly Beta › Sandwich › Jelly Rolls › 0.57 43.0 3.79e-01 80.6% 61.3%
3l9bA00 2.60.40.150 Mainly Beta › Sandwich › Immunoglobulin-like › C2 domain 0.56 49.0 4.45e-01 96.8% 88.1%
1a8mA00 2.60.120.40 Mainly Beta › Sandwich › Jelly Rolls › 0.56 42.0 3.65e-01 80.6% 61.8%
4jqrA00 2.60.120.1350 Mainly Beta › Sandwich › Jelly Rolls › Protein of unknown function DUF4465 0.56 47.0 3.57e-01 92.5% 62.2%
2df7A02 2.60.120.660 Mainly Beta › Sandwich › Jelly Rolls › icosahedral virus 0.55 45.0 3.98e-01 89.2% 67.1%
3hn3A02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.55 45.0 4.34e-01 88.2% 77.9%
4oq8A00 2.60.120.220 Mainly Beta › Sandwich › Jelly Rolls › Satellite virus coat domain 0.55 44.0 3.84e-01 88.2% 56.2%
1uctA01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.55 38.0 3.86e-01 79.6% 72.5%
3gtyX02 3.10.50.30 Alpha Beta › Roll › Chitinase A; domain 3 › Transcription elongation factor, GreA/GreB, C-terminal domain 0.55 36.0 3.80e-01 81.7% 75.0%
2vpaA00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.55 44.0 3.52e-01 90.3% 69.6%
2re9A01 2.60.120.40 Mainly Beta › Sandwich › Jelly Rolls › 0.55 41.0 3.50e-01 80.6% 61.1%
2z04B03 3.30.470.20 Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › ATP-grasp fold, B domain 0.54 42.0 3.36e-01 82.8% 47.3%
4n2kA01 2.60.40.1860 Mainly Beta › Sandwich › Immunoglobulin-like › Protein-arginine deiminase, N-terminal domain 0.53 43.0 3.98e-01 87.1% 73.1%
3no8A00 2.60.120.820 Mainly Beta › Sandwich › Jelly Rolls › PHR domain 0.51 45.0 3.87e-01 100.0% 72.0%
4e4tA03 3.30.470.20 Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › ATP-grasp fold, B domain 0.51 38.0 3.07e-01 81.7% 46.0%
5mj6A03 2.60.40.1910 Mainly Beta › Sandwich › Immunoglobulin-like › 0.51 35.0 3.72e-01 100.0% 83.7%
2c4xA02 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.51 44.0 3.73e-01 96.8% 79.5%
ECOD (91)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3964118 11.14.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Ig-like domains in STT3 › Ig-like domains in STT3 0.86 75.0 7.55e-01 95.7% 91.5%
4162306 109.3.1.162 alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank, Ank_2, Ank_5 0.79 73.0 4.75e-01 100.0% 26.8%
4046226 109.3.1.0 alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat 0.79 73.0 5.92e-01 100.0% 58.2%
4944748 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.74 58.0 5.33e-01 83.9% 75.0%
140125 11.1.1.93 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › DUF1425 0.74 52.0 4.89e-01 73.1% 61.5%
4932993 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.72 58.0 5.80e-01 84.9% 95.8%
4395737 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.71 50.0 5.24e-01 88.2% 80.0%
3905727 11.1.1.17 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Transglut_C 0.71 56.0 5.03e-01 84.9% 71.5%
3522414 11.1.1.17 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Transglut_C 0.70 56.0 5.07e-01 84.9% 73.6%
4629791 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.70 58.0 5.53e-01 87.1% 81.0%
4938556 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.70 56.0 4.85e-01 86.0% 85.7%
5078744 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.70 56.0 4.23e-01 86.0% 38.6%
4999355 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.69 55.0 5.02e-01 83.9% 85.8%
3939165 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.69 56.0 5.23e-01 87.1% 84.3%
3099995 11.1.1.17 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Transglut_C 0.69 56.0 5.14e-01 87.1% 77.7%
3897413 11.1.1.17 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Transglut_C 0.69 56.0 5.24e-01 87.1% 82.6%
3748702 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.69 56.0 3.58e-01 87.1% 21.6%
3573045 11.1.1.17 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Transglut_C 0.69 56.0 5.06e-01 87.1% 76.0%
5083247 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.69 55.0 5.28e-01 88.2% 76.0%
4411709 11.1.1.17 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Transglut_C 0.69 55.0 5.18e-01 86.0% 82.6%
3758040 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.69 56.0 5.12e-01 87.1% 83.3%
5055680 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.69 55.0 5.18e-01 87.1% 72.2%
3895339 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.69 56.0 5.21e-01 87.1% 82.6%
3525299 219.1.1.13 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Transglut_core 0.68 55.0 3.50e-01 86.0% 21.5%
4961062 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.68 55.0 5.15e-01 87.1% 77.4%
3903731 11.1.1.17 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Transglut_C 0.68 55.0 5.15e-01 87.1% 81.7%
1549432 11.1.1.14 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Glyco_hydro_2 0.68 55.0 5.12e-01 87.1% 74.4%
4238325 11.1.1.17 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Transglut_C 0.68 54.0 5.08e-01 86.0% 82.6%
4019584 11.1.1.236 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Mannosidase_ig 0.68 55.0 5.55e-01 88.2% 86.3%
3604288 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.68 55.0 5.30e-01 87.1% 85.7%
3904967 11.1.1.17 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Transglut_C 0.68 55.0 5.13e-01 87.1% 83.5%
3780769 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.67 55.0 5.08e-01 88.2% 82.5%
5060440 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.67 55.0 5.22e-01 88.2% 74.5%
5080593 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.67 53.0 4.04e-01 84.9% 37.7%
4402197 11.1.1.236 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Mannosidase_ig 0.67 55.0 5.48e-01 88.2% 86.3%
3584645 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.67 54.0 5.05e-01 87.1% 79.1%
3234635 11.1.4.63 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like › DUF870 0.67 59.0 5.53e-01 98.9% 93.0%
5068112 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.67 53.0 5.10e-01 84.9% 81.0%
4955277 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.67 53.0 4.96e-01 86.0% 83.5%
5015216 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.67 53.0 4.87e-01 87.1% 68.8%
5046276 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.66 53.0 5.00e-01 84.9% 72.7%
3478064 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.66 51.0 5.01e-01 81.7% 80.0%
4941303 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.66 53.0 4.78e-01 87.1% 62.3%
4950854 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.66 51.0 5.21e-01 82.8% 87.8%
5070840 11.1.1.103 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › CARDB 0.65 53.0 5.05e-01 87.1% 80.0%
5069116 11.1.1.103 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › CARDB 0.65 53.0 5.02e-01 87.1% 77.3%
3244892 11.1.4.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like 0.65 58.0 5.53e-01 100.0% 95.5%
5061215 11.1.1.103 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › CARDB 0.65 52.0 4.98e-01 87.1% 78.2%
3403486 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.65 53.0 5.03e-01 88.2% 80.9%
4335827 11.1.1.612 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › DUF5443 0.65 52.0 4.50e-01 87.1% 75.2%
3491868 11.2.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain 0.65 58.0 5.13e-01 100.0% 94.1%
5055930 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.65 51.0 5.00e-01 87.1% 78.0%
3253379 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.65 52.0 5.04e-01 86.0% 95.2%
4448377 11.1.1.203 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › LacZ_4 0.64 52.0 5.09e-01 87.1% 90.0%
4865058 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.64 52.0 5.07e-01 88.2% 83.5%
4970388 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.64 45.0 4.89e-01 77.4% 92.0%
3754279 11.1.1.239 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › MG3 0.64 52.0 4.77e-01 87.1% 80.8%
3688505 11.1.1.866 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig_Rha78A_N 0.64 52.0 4.82e-01 87.1% 77.4%
3506980 511.1.1.0 beta sandwiches › Heat shock protein 70kD (HSP70), peptide-binding domain › Heat shock protein 70kD (HSP70), peptide-binding domain › Heat shock protein 70kD (HSP70), peptide-binding domain 0.63 53.0 4.55e-01 90.3% 97.9%
3226798 11.1.4.63 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like › DUF870 0.63 56.0 5.31e-01 100.0% 93.6%
3968562 11.1.1.132 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › YscW 0.62 55.0 5.22e-01 98.9% 93.6%
5034851 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.62 48.0 4.47e-01 83.9% 74.2%
3564684 11.2.1.1 beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › C2 0.62 55.0 4.79e-01 100.0% 81.4%
5010503 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.62 48.0 4.78e-01 82.8% 88.4%
3265727 11.2.1.1 beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › C2 0.62 55.0 4.71e-01 100.0% 75.3%
3480782 11.2.1.1 beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › C2 0.62 54.0 4.72e-01 100.0% 80.7%
3406797 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.62 50.0 4.82e-01 89.2% 81.9%
3882425 511.1.1.0 beta sandwiches › Heat shock protein 70kD (HSP70), peptide-binding domain › Heat shock protein 70kD (HSP70), peptide-binding domain › Heat shock protein 70kD (HSP70), peptide-binding domain 0.62 50.0 4.25e-01 89.2% 88.6%
3318082 11.1.1.872 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig_ENGASE1_C 0.62 50.0 4.25e-01 87.1% 62.7%
3239601 11.2.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain 0.62 54.0 4.96e-01 100.0% 87.2%
5046933 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.62 49.0 4.53e-01 86.0% 75.0%
3937721 11.2.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain 0.61 53.0 4.45e-01 100.0% 65.9%
3515326 10.10.1.0 beta sandwiches › jelly-roll › Lipase/lipooxygenase domain (PLAT/LH2 domain) › Lipase/lipooxygenase domain (PLAT/LH2 domain) 0.61 48.0 4.29e-01 86.0% 97.0%
3250775 11.2.1.1 beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › C2 0.61 53.0 4.84e-01 100.0% 85.2%
5014955 10.1.2.0 beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.61 45.0 4.14e-01 92.5% 60.8%
3927969 11.1.1.41 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Arrestin_C 0.60 46.0 3.98e-01 83.9% 65.2%
4473642 11.1.1.14 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Glyco_hydro_2 0.60 46.0 4.57e-01 83.9% 80.0%
3244538 10.2.1.0 beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) 0.60 49.0 3.79e-01 90.3% 45.1%
4284039 11.1.4.102 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like › SOP4 0.59 51.0 4.37e-01 97.8% 89.7%
3496231 11.2.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain 0.59 51.0 4.55e-01 100.0% 79.3%
4959031 11.4.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Antigen MPT63/MPB63 (immunoprotective extracellular protein) › Antigen MPT63/MPB63 (immunoprotective extracellular protein) 0.59 45.0 4.18e-01 84.9% 76.8%
3891965 10.3.1.1 beta sandwiches › jelly-roll › TNF-like › TNF-like › TNF 0.57 43.0 3.65e-01 80.6% 52.9%
3529726 11.2.1.1 beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › C2 0.57 50.0 4.53e-01 100.0% 80.0%
4305531 10.32.1.8 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › CBM_4_9 0.56 45.0 3.81e-01 97.8% 51.6%
3608429 11.2.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain 0.56 50.0 4.05e-01 100.0% 61.7%
5042583 10.3.1.0 beta sandwiches › jelly-roll › TNF-like › TNF-like 0.56 41.0 4.07e-01 76.3% 76.8%
1884973 10.3.1.1 beta sandwiches › jelly-roll › TNF-like › TNF-like › TNF 0.56 42.0 3.63e-01 80.6% 56.0%
4939745 1.1.5.33 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 0.56 44.0 3.37e-01 86.0% 37.7%
3251815 10.32.1.0 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.54 46.0 4.29e-01 97.8% 73.1%
151167 10.3.1.1 beta sandwiches › jelly-roll › TNF-like › TNF-like › TNF 0.53 42.0 3.58e-01 86.0% 57.7%
4970162 10.1.2.0 beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.51 46.0 3.79e-01 100.0% 75.2%
D4 medium residues 543-656
PDB
Domain cluster: representative
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF17482.8 best Phage_sheath_1C 31.7 1.90e-07 83.3% 70.2%
CATH (10)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3kg0A00 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.67 37.0 3.96e-01 77.2% 61.9%
3vm9A02 6.10.140.2110 Special › Helix non-globular › Helix Hairpins › 0.63 31.0 4.30e-01 72.8% 96.5%
2kwhA00 1.20.58.90 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.62 29.0 3.95e-01 74.6% 89.3%
3icxA01 1.10.287.660 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin 0.59 31.0 3.80e-01 77.2% 78.7%
2z15A00 3.90.640.90 Alpha Beta › Alpha-Beta Complex › Actin; Chain A, domain 4 › Anti-proliferative protein, N-terminal domain 0.57 40.0 3.98e-01 71.9% 72.3%
1bkjA00 3.40.109.10 Alpha Beta › 3-Layer(aba) Sandwich › NADH Oxidase › NADH Oxidase 0.56 41.0 3.34e-01 78.1% 62.2%
1vkvA01 3.30.428.10 Alpha Beta › 2-Layer Sandwich › HIT family, subunit A › HIT-like 0.52 38.0 3.31e-01 75.4% 75.0%
5z7qA00 1.20.1330.10 Mainly Alpha › Up-down Bundle › f41 fragment of flagellin, N-terminal domain › f41 fragment of flagellin, N-terminal domain 0.51 37.0 3.19e-01 74.6% 72.2%
1iruI00 3.60.20.10 Alpha Beta › 4-Layer Sandwich › Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 › Aminohydrolase, N-terminal nucleophile (Ntn) domain 0.51 38.0 3.11e-01 78.9% 75.9%
1ij5A01 1.20.58.90 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.51 33.0 3.96e-01 100.0% 100.0%
ECOD (23)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4995823 283.2.1.2 a+b duplicates or obligate multimers › Creatinase/aminopeptidase-like › gpW/gp25-like › gpW/gp25-like › Phage_sheath_1C 0.96 72.0 7.41e-01 77.2% 85.5%
3980756 283.2.1.2 a+b duplicates or obligate multimers › Creatinase/aminopeptidase-like › gpW/gp25-like › gpW/gp25-like › Phage_sheath_1C 0.94 79.0 8.30e-01 87.7% 95.2%
4957559 283.2.1.2 a+b duplicates or obligate multimers › Creatinase/aminopeptidase-like › gpW/gp25-like › gpW/gp25-like › Phage_sheath_1C 0.93 75.0 8.07e-01 83.3% 100.0%
3949098 283.2.1.2 a+b duplicates or obligate multimers › Creatinase/aminopeptidase-like › gpW/gp25-like › gpW/gp25-like › Phage_sheath_1C 0.92 80.0 8.22e-01 90.4% 95.5%
2468539 283.2.1.2 a+b duplicates or obligate multimers › Creatinase/aminopeptidase-like › gpW/gp25-like › gpW/gp25-like › Phage_sheath_1C 0.92 83.0 8.28e-01 93.0% 96.5%
4883050 283.2.1.2 a+b duplicates or obligate multimers › Creatinase/aminopeptidase-like › gpW/gp25-like › gpW/gp25-like › Phage_sheath_1C 0.86 63.0 7.19e-01 76.3% 100.0%
1518918 283.2.1.2 a+b duplicates or obligate multimers › Creatinase/aminopeptidase-like › gpW/gp25-like › gpW/gp25-like › Phage_sheath_1C 0.84 70.0 7.12e-01 88.6% 91.1%
2095489 283.2.1.0 a+b duplicates or obligate multimers › Creatinase/aminopeptidase-like › gpW/gp25-like › gpW/gp25-like 0.84 57.0 6.43e-01 75.4% 89.8%
4888785 283.2.1.2 a+b duplicates or obligate multimers › Creatinase/aminopeptidase-like › gpW/gp25-like › gpW/gp25-like › Phage_sheath_1C 0.83 58.0 6.70e-01 71.9% 100.0%
3945698 283.2.1.10 a+b duplicates or obligate multimers › Creatinase/aminopeptidase-like › gpW/gp25-like › gpW/gp25-like › PF29514 0.81 66.0 6.93e-01 86.0% 100.0%
1148184 283.2.1.2 a+b duplicates or obligate multimers › Creatinase/aminopeptidase-like › gpW/gp25-like › gpW/gp25-like › Phage_sheath_1C 0.79 58.0 6.03e-01 77.2% 80.6%
4988099 283.2.1.10 a+b duplicates or obligate multimers › Creatinase/aminopeptidase-like › gpW/gp25-like › gpW/gp25-like › PF29514 0.75 56.0 5.52e-01 76.3% 90.8%
4433785 283.2.1.4 a+b duplicates or obligate multimers › Creatinase/aminopeptidase-like › gpW/gp25-like › gpW/gp25-like › GP46 0.72 52.0 4.94e-01 73.7% 93.1%
4946087 283.2.1.0 a+b duplicates or obligate multimers › Creatinase/aminopeptidase-like › gpW/gp25-like › gpW/gp25-like 0.71 51.0 4.95e-01 74.6% 73.6%
4822938 4031.1.1.1 a+b three layers › Nigritoxin middle domain › Nigritoxin middle domain › Nigritoxin middle domain › Flagellin_N,Flagellin_C 0.61 34.0 2.99e-01 78.9% 35.1%
None 0.58 42.0 3.56e-01 76.3% 82.5%
3354506 304.28.1.10 a+b two layers › Alpha-beta plaits › Ferredoxin domains in multidrug efflux transporter › Multidrug efflux transporter AcrB pore domain › Helitron_like_N 0.55 39.0 4.11e-01 78.1% 81.7%
None 0.55 41.0 2.75e-01 80.7% 50.6%
5059543 304.20.1.4 a+b two layers › Alpha-beta plaits › PAP/Archaeal CCA-adding enzyme, C-terminal domain › PAP/Archaeal CCA-adding enzyme, C-terminal domain › CAA_C 0.55 37.0 3.18e-01 78.1% 42.1%
3831185 605.1.1.0 alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase 0.53 33.0 3.98e-01 73.7% 100.0%
3599158 2484.1.1.0 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.52 37.0 2.88e-01 73.7% 79.1%
4091981 7581.1.1.12 a/b three-layered sandwiches › Thiolase-like › Thiolase-like › Thiolase-like › ACP_syn_III_C 0.51 37.0 3.14e-01 76.3% 78.8%
4252594 10.12.1.15 beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › ARD 0.51 36.0 3.15e-01 73.7% 82.3%