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MW460246.1__QRE00425.1__X__00067

Bact-Vir

MW460246.1__QRE00425.1__X__00067

Identity

Accession:
MW460246 ↗
Kingdom:
phage

Quality

83.8 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 6-93
PDB
Domain cluster: representative
CATH (49)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1mhnA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.84 54.0 6.49e-01 84.1% 98.3%
4ytlA01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.83 47.0 6.11e-01 75.0% 100.0%
4b9wA02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.82 50.0 6.16e-01 76.1% 96.4%
5ygbA02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.82 58.0 6.13e-01 84.1% 81.2%
2eqkA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.81 54.0 5.91e-01 84.1% 82.2%
7cfdA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.81 53.0 5.82e-01 85.2% 80.8%
3askA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.81 55.0 6.49e-01 79.5% 100.0%
2diqA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.80 53.0 5.05e-01 85.2% 59.0%
2ckkA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.80 48.0 6.04e-01 72.7% 100.0%
3c4sA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.78 49.0 6.00e-01 79.5% 98.2%
1igqB00 2.30.30.150 Mainly Beta › Roll › SH3 type barrels. › KorB, C-terminal domain 0.78 43.0 5.34e-01 87.5% 86.0%
3p8bB02 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.77 50.0 5.83e-01 79.5% 93.5%
4ld6A00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.77 61.0 5.46e-01 86.4% 62.4%
1khcA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.77 52.0 5.98e-01 78.4% 93.8%
2l89A00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.74 59.0 5.46e-01 84.1% 68.5%
4fw1A02 2.30.30.10 Mainly Beta › Roll › SH3 type barrels. › Integrase, C-terminal domain superfamily, retroviral 0.72 42.0 5.26e-01 73.9% 96.3%
4iupA02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.72 55.0 6.04e-01 81.8% 98.6%
1x6gA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.71 53.0 5.49e-01 81.8% 84.0%
1uebA01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.71 49.0 5.63e-01 81.8% 100.0%
1iz6A01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.70 50.0 5.57e-01 84.1% 95.7%
3cpfA01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.70 48.0 5.41e-01 84.1% 95.4%
1whlA00 2.30.30.190 Mainly Beta › Roll › SH3 type barrels. › CAP Gly-rich-like domain 0.70 55.0 5.38e-01 83.0% 90.5%
1khiA01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.68 51.0 5.47e-01 83.0% 92.0%
3oyyA01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.67 47.0 5.32e-01 83.0% 98.5%
7xpkA01 2.30.30.490 Mainly Beta › Roll › SH3 type barrels. › Bromo adjacent homology (BAH) domain 0.67 53.0 4.44e-01 84.1% 60.0%
1zuyA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.66 43.0 5.14e-01 70.5% 100.0%
1lckA01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.65 42.0 5.02e-01 87.5% 98.3%
2lt1A00 2.40.10.170 Mainly Beta › Beta Barrel › Thrombin, subunit H › 0.65 51.0 5.50e-01 100.0% 100.0%
2eczA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.64 42.0 4.66e-01 73.9% 84.3%
2v1qA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.64 42.0 5.00e-01 86.4% 100.0%
6vlfA03 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.64 41.0 4.85e-01 86.4% 100.0%
1u04A02 3.90.70.180 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › 0.64 48.0 4.41e-01 79.5% 99.1%
2lqkA00 2.40.10.170 Mainly Beta › Beta Barrel › Thrombin, subunit H › 0.63 45.0 4.88e-01 81.8% 92.9%
2cudA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.63 45.0 4.75e-01 94.3% 83.5%
1k1zA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.61 48.0 5.11e-01 98.9% 96.2%
3s9xA00 3.10.400.10 Alpha Beta › Roll › Sulfate adenylyltransferase › Sulfate adenylyltransferase 0.60 45.0 3.79e-01 80.7% 88.7%
5f3yA05 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.57 40.0 4.31e-01 73.9% 100.0%
2krtA01 3.10.450.270 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.56 41.0 3.90e-01 76.1% 86.4%
2m1hA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.55 43.0 4.02e-01 84.1% 68.2%
3k6yA02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.55 43.0 4.06e-01 85.2% 69.2%
2nlkA02 3.90.190.10 Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily 0.55 41.0 2.93e-01 79.5% 43.1%
3h3iA00 2.40.128.220 Mainly Beta › Beta Barrel › Lipocalin › 0.53 38.0 3.33e-01 76.1% 67.4%
3wa2X01 3.10.450.40 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.52 37.0 3.79e-01 76.1% 78.2%
4gxbA03 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.52 39.0 3.78e-01 83.0% 91.3%
4xq7A01 3.30.460.10 Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › Beta Polymerase, domain 2 0.52 38.0 3.13e-01 77.3% 68.6%
1vx7M00 2.40.150.20 Mainly Beta › Beta Barrel › Ribosomal Protein L14 › Ribosomal protein L14/L23 0.51 39.0 3.42e-01 80.7% 83.3%
5b3pA00 3.30.460.80 Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › NADH:ubiquinone oxidoreductase Nqo5 subunit 0.51 33.0 2.95e-01 75.0% 44.0%
2xglA00 3.10.450.300 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › YebF/Colicin-M immunity protein 0.51 36.0 3.59e-01 75.0% 82.4%
2b39A03 2.60.40.1940 Mainly Beta › Sandwich › Immunoglobulin-like › 0.50 35.0 3.19e-01 73.9% 84.0%
ECOD (54)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3473981 4.1.1.12 beta barrels › SH3 › SH3 › SH3 › PWWP 0.85 66.0 5.79e-01 81.8% 75.2%
3750522 4.1.1.218 beta barrels › SH3 › SH3 › SH3 › PWP3A-B_N 0.83 57.0 5.19e-01 89.8% 56.4%
3826141 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.82 67.0 6.69e-01 85.2% 90.0%
3410370 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.82 62.0 6.85e-01 83.0% 98.6%
4002985 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.81 54.0 6.44e-01 78.4% 100.0%
3394215 4.1.1.9 beta barrels › SH3 › SH3 › SH3 › TUDOR 0.81 59.0 5.67e-01 85.2% 67.0%
3617889 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.80 60.0 6.15e-01 78.4% 100.0%
2157301 4.1.1.78 beta barrels › SH3 › SH3 › SH3 › TTD 0.80 63.0 6.92e-01 87.5% 100.0%
3570369 4.1.1.9 beta barrels › SH3 › SH3 › SH3 › TUDOR 0.78 55.0 5.54e-01 84.1% 72.2%
3730229 4.1.1.102 beta barrels › SH3 › SH3 › SH3 › Tudor_3 0.78 55.0 5.98e-01 84.1% 86.7%
3405627 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.78 55.0 5.40e-01 88.6% 68.4%
1144815 4.1.1.103 beta barrels › SH3 › SH3 › SH3 › SH3_12 0.77 61.0 6.34e-01 83.0% 93.8%
3851361 4.1.1.78 beta barrels › SH3 › SH3 › SH3 › TTD 0.75 58.0 5.43e-01 80.7% 74.3%
3184389 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.75 59.0 4.63e-01 83.0% 65.7%
3489170 4.8.1.6 beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Tudor-knot 0.75 55.0 5.49e-01 76.1% 90.0%
145843 4.1.1.12 beta barrels › SH3 › SH3 › SH3 › PWWP 0.74 59.0 5.46e-01 84.1% 68.5%
3573739 4.1.1.85 beta barrels › SH3 › SH3 › SH3 › MTR4_beta-barrel 0.73 53.0 4.86e-01 76.1% 74.8%
3934278 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.73 59.0 5.36e-01 85.2% 67.8%
3938484 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.73 65.0 5.78e-01 94.3% 89.2%
5052256 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.73 58.0 5.69e-01 84.1% 91.6%
3245735 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.73 51.0 4.63e-01 75.0% 55.7%
3931161 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.73 58.0 5.30e-01 85.2% 79.1%
3472685 3324.1.1.2 extended segments › Helical arch in Ski2-like helicases › Helical arch in Ski2-like helicases › Helical arch in Ski2-like helicases 0.72 56.0 3.94e-01 83.0% 55.2%
3470133 4.1.1.12 beta barrels › SH3 › SH3 › SH3 › PWWP 0.72 56.0 5.08e-01 81.8% 64.9%
3932647 4.8.1.0 beta barrels › SH3 › Chromo domain-like › Chromo domain-like 0.71 54.0 5.48e-01 85.2% 81.2%
3643549 4.1.1.139 beta barrels › SH3 › SH3 › SH3 › IF5A-like_N 0.71 51.0 5.29e-01 83.0% 81.2%
3940546 4.1.1.85 beta barrels › SH3 › SH3 › SH3 › MTR4_beta-barrel 0.71 52.0 4.72e-01 76.1% 74.8%
3485761 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.71 61.0 4.72e-01 90.9% 68.3%
3924619 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.71 58.0 5.12e-01 85.2% 63.3%
3218545 4.8.1.6 beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Tudor-knot 0.71 56.0 5.75e-01 84.1% 100.0%
3631313 4.1.1.225 beta barrels › SH3 › SH3 › SH3 › DUF7025 0.70 56.0 4.32e-01 85.2% 50.0%
3358748 4.1.1.94 beta barrels › SH3 › SH3 › SH3 › SAWADEE 0.69 55.0 5.74e-01 83.0% 100.0%
3691620 4.1.1.225 beta barrels › SH3 › SH3 › SH3 › DUF7025 0.67 54.0 4.92e-01 85.2% 83.5%
3255737 4.1.1.140 beta barrels › SH3 › SH3 › SH3 › Pif1_2B_dom 0.66 53.0 4.76e-01 86.4% 99.2%
3475919 4.1.1.239 beta barrels › SH3 › SH3 › SH3 › SH3-B_UBE2O 0.65 49.0 3.30e-01 79.5% 48.6%
3739405 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.64 49.0 4.97e-01 79.5% 100.0%
3941958 1.1.7.0 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.63 48.0 4.82e-01 80.7% 85.6%
3322460 4.1.1.94 beta barrels › SH3 › SH3 › SH3 › SAWADEE 0.63 56.0 5.05e-01 94.3% 79.1%
5052888 1.1.7.0 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.63 49.0 4.36e-01 83.0% 65.6%
4049824 4.1.1.9 beta barrels › SH3 › SH3 › SH3 › TUDOR 0.62 58.0 5.28e-01 100.0% 83.5%
4946578 1.1.7.140 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › DUF87 0.60 44.0 4.01e-01 77.3% 81.7%
5044755 1.1.7.28 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › HAS-barrel 0.60 46.0 4.09e-01 81.8% 79.2%
3576128 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.59 51.0 4.64e-01 94.3% 80.0%
4033491 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.58 39.0 3.74e-01 70.5% 95.2%
3264469 4.1.1.309 beta barrels › SH3 › SH3 › SH3 › MRP-S34 0.57 44.0 4.49e-01 84.1% 91.8%
3169767 1.1.7.49 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › Ski7_2nd 0.55 48.0 4.12e-01 96.6% 99.3%
3249998 5.1.5.12 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › FG-GAP_3 0.54 41.0 2.82e-01 81.8% 24.3%
3203392 1.1.5.0 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 0.53 45.0 3.35e-01 96.6% 80.8%
3696153 2003.1.2.15 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FAD_binding_3 0.53 43.0 2.91e-01 86.4% 57.5%
3938274 2003.1.3.0 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Nucleotide-binding domain 0.53 40.0 3.06e-01 80.7% 70.2%
3498580 5.1.4.6 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40,ANAPC4_WD40 0.53 42.0 2.74e-01 87.5% 25.4%
3736088 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.52 38.0 3.63e-01 77.3% 99.0%
4976922 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.51 35.0 3.62e-01 75.0% 74.1%
4086313 222.1.1.12 a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase › PS-DH 0.51 38.0 3.18e-01 79.5% 88.1%