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MW460246.1__QRE00441.1__X__00083

Bact-Vir

MW460246.1__QRE00441.1__X__00083

Identity

Accession:
MW460246 ↗
Kingdom:
phage

Quality

61.6 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Lindbergviridae› Irusalimvirus› Burkholderia_phage_BCSR52

TaxID: 2805748

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 6-65
PDB
Domain cluster: representative
CATH (67)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1uebA01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.89 80.0 7.90e-01 96.7% 100.0%
3oyyA01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.88 79.0 7.68e-01 98.3% 98.5%
3a5zB01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.86 77.0 7.55e-01 96.7% 100.0%
6s8zA01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.85 74.0 7.37e-01 95.0% 100.0%
4dsdA00 3.40.1420.30 Alpha Beta › 3-Layer(aba) Sandwich › Inhibitor of vertebrate lysozyme, Ivy › 0.73 54.0 4.22e-01 78.3% 44.4%
6az1E03 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.72 58.0 5.50e-01 88.3% 77.8%
7tzoA01 1.10.1070.11 Mainly Alpha › Orthogonal Bundle › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, Domain 5 › Phosphatidylinositol 3-/4-kinase, catalytic domain 0.71 53.0 3.81e-01 80.0% 98.9%
1w4sA00 2.30.30.490 Mainly Beta › Roll › SH3 type barrels. › Bromo adjacent homology (BAH) domain 0.70 57.0 4.27e-01 90.0% 87.0%
3j7yD02 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.69 60.0 5.49e-01 100.0% 82.7%
5ycqA00 2.30.30.390 Mainly Beta › Roll › SH3 type barrels. › Hemimethylated DNA-binding domain 0.69 59.0 5.44e-01 93.3% 74.0%
3u12A00 2.30.29.180 Mainly Beta › Roll › PH-domain like › Ubiquitin carboxyl-terminal hydrolase 26/29/37, pleckstrin homology-like domain 0.69 55.0 4.66e-01 90.0% 79.8%
2hx0A01 3.30.1330.80 Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › Hypothetical protein, similar to alpha- acetolactate decarboxylase; domain 2 0.69 59.0 4.68e-01 100.0% 67.4%
1njhA00 2.70.180.10 Mainly Beta › Distorted Sandwich › Protein Yojf; Chain: A; › Hypothetical protein YojF 0.69 56.0 4.74e-01 95.0% 91.7%
2cn2A02 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.67 55.0 3.37e-01 91.7% 95.9%
2w1zA02 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.67 52.0 4.03e-01 86.7% 87.9%
4b6mB00 2.30.30.190 Mainly Beta › Roll › SH3 type barrels. › CAP Gly-rich-like domain 0.67 55.0 5.02e-01 90.0% 93.7%
2jiiA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.66 53.0 4.38e-01 90.0% 83.6%
4g56D00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.65 55.0 3.45e-01 91.7% 26.4%
1lomA00 2.30.60.10 Mainly Beta › Roll › HIV-inactivating Protein, Cyanovirin-n › Cyanovirin-N 0.64 41.0 3.47e-01 90.0% 39.6%
4jrnA02 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.63 49.0 3.87e-01 91.7% 75.2%
2gfaB01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.62 53.0 5.29e-01 98.3% 98.4%
2b4wA00 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.62 48.0 3.16e-01 88.3% 93.5%
1shyB01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.62 52.0 3.08e-01 93.3% 32.9%
8c0zE01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.62 50.0 3.95e-01 91.7% 90.1%
4bb7B00 2.30.30.490 Mainly Beta › Roll › SH3 type barrels. › Bromo adjacent homology (BAH) domain 0.61 50.0 3.46e-01 96.7% 43.6%
3j7aF03 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.61 48.0 4.59e-01 90.0% 77.5%
3uc2A00 2.60.40.3340 Mainly Beta › Sandwich › Immunoglobulin-like › Domain of unknown function DUF4426 0.61 49.0 3.90e-01 88.3% 96.0%
2e5wA01 2.30.140.10 Mainly Beta › Roll › Spermidine Synthase; Chain: A, domain 2 › Spermidine synthase, tetramerisation domain 0.61 43.0 4.46e-01 75.0% 89.3%
6xmtA02 3.40.1110.10 Alpha Beta › 3-Layer(aba) Sandwich › Calcium-transporting ATPase, cytoplasmic domain N › Calcium-transporting ATPase, cytoplasmic domain N 0.61 47.0 3.45e-01 85.0% 62.5%
2b2cA01 2.30.140.10 Mainly Beta › Roll › Spermidine Synthase; Chain: A, domain 2 › Spermidine synthase, tetramerisation domain 0.60 45.0 4.48e-01 81.7% 92.2%
3d30A02 2.60.40.760 Mainly Beta › Sandwich › Immunoglobulin-like › Expansin, cellulose-binding-like domain 0.60 50.0 4.31e-01 91.7% 94.7%
2o07A01 2.30.140.10 Mainly Beta › Roll › Spermidine Synthase; Chain: A, domain 2 › Spermidine synthase, tetramerisation domain 0.60 44.0 4.50e-01 80.0% 91.5%
3l8kA02 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.60 46.0 3.68e-01 85.0% 71.8%
1f0cA02 2.30.39.10 Mainly Beta › Roll › Alpha-1-antitrypsin; domain 1 › Alpha-1-antitrypsin, domain 1 0.60 43.0 3.46e-01 76.7% 80.5%
4jcwA02 2.60.40.760 Mainly Beta › Sandwich › Immunoglobulin-like › Expansin, cellulose-binding-like domain 0.59 49.0 4.30e-01 91.7% 92.2%
2kdsA01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.59 51.0 4.52e-01 100.0% 67.4%
6j8yA00 3.70.10.10 Alpha Beta › Box › Proliferating Cell Nuclear Antigen › 0.59 48.0 3.12e-01 88.3% 40.1%
2k57A00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.59 44.0 4.59e-01 85.0% 90.9%
1iy9A02 2.30.140.10 Mainly Beta › Roll › Spermidine Synthase; Chain: A, domain 2 › Spermidine synthase, tetramerisation domain 0.59 42.0 4.46e-01 76.7% 96.2%
2fhdA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.59 44.0 4.45e-01 86.7% 88.7%
3cinA02 3.30.360.10 Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 0.58 45.0 3.82e-01 85.0% 96.2%
1e0bA00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.58 43.0 4.32e-01 100.0% 80.3%
3a0oA03 2.70.98.70 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › 0.58 46.0 2.99e-01 88.3% 83.6%
1reoA02 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.58 44.0 3.38e-01 85.0% 52.0%
1inlC02 2.30.140.10 Mainly Beta › Roll › Spermidine Synthase; Chain: A, domain 2 › Spermidine synthase, tetramerisation domain 0.57 41.0 4.06e-01 76.7% 79.7%
1ci3M02 2.40.50.100 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain 0.57 47.0 4.84e-01 90.0% 96.6%
1w1wA00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.57 42.0 2.70e-01 78.3% 32.1%
3zfnA02 2.30.140.40 Mainly Beta › Roll › Spermidine Synthase; Chain: A, domain 2 › Pestivirus Npro endopeptidase C53, interaction domain 0.57 38.0 3.94e-01 70.0% 73.7%
2o62A01 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.56 46.0 3.70e-01 95.0% 88.5%
2yf0A01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.56 50.0 4.44e-01 100.0% 100.0%
3mp6A05 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.55 45.0 4.45e-01 100.0% 92.1%
2qpvA00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.55 44.0 3.46e-01 88.3% 71.2%
5j60B02 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.55 45.0 3.71e-01 95.0% 89.2%
3c96A01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.55 49.0 3.52e-01 100.0% 41.7%
5tz6B02 3.10.129.120 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › 0.55 43.0 3.32e-01 91.7% 85.1%
1z47A03 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.54 39.0 4.27e-01 78.3% 95.9%
7byjA02 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.54 45.0 3.96e-01 98.3% 96.8%
3c4bA02 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.54 46.0 4.45e-01 95.0% 88.1%
3fssA02 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.54 46.0 4.18e-01 100.0% 95.3%
1b9mA03 2.40.50.100 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain 0.53 43.0 4.13e-01 90.0% 90.1%
3o4fC01 2.30.140.10 Mainly Beta › Roll › Spermidine Synthase; Chain: A, domain 2 › Spermidine synthase, tetramerisation domain 0.53 38.0 4.03e-01 88.3% 90.2%
3ic9A03 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.53 41.0 3.35e-01 86.7% 73.8%
2ra2B00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.53 39.0 3.99e-01 85.0% 86.2%
3pcrA01 3.10.450.460 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › EspG protein, N-terminal domain 0.53 43.0 3.71e-01 90.0% 86.2%
6gbuD00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.51 38.0 3.81e-01 86.7% 92.2%
7bsbI01 2.100.10.30 Mainly Beta › Aligned Prism › Vitelline Membrane Outer Layer Protein I, subunit A › Jacalin-like lectin domain 0.50 43.0 3.46e-01 100.0% 92.9%
2wtzA02 3.40.1190.10 Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Mur-like, catalytic domain 0.50 42.0 2.89e-01 98.3% 87.2%
ECOD (90)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4037383 4.1.1.57 ↗ beta barrels › SH3 › SH3 › SH3 › EFP_N 0.92 85.0 8.29e-01 98.3% 98.5%
4158157 4.1.1.57 ↗ beta barrels › SH3 › SH3 › SH3 › EFP_N 0.91 84.0 8.18e-01 98.3% 98.5%
3265170 4.1.1.57 ↗ beta barrels › SH3 › SH3 › SH3 › EFP_N 0.90 83.0 8.10e-01 98.3% 98.5%
3306779 4.1.1.57 ↗ beta barrels › SH3 › SH3 › SH3 › EFP_N 0.90 83.0 8.05e-01 98.3% 98.5%
3608236 4.1.1.57 ↗ beta barrels › SH3 › SH3 › SH3 › EFP_N 0.90 83.0 8.07e-01 98.3% 98.5%
3599172 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.89 83.0 8.03e-01 98.3% 98.5%
4051625 4.1.1.57 ↗ beta barrels › SH3 › SH3 › SH3 › EFP_N 0.89 82.0 8.01e-01 98.3% 98.5%
4028885 4.1.1.57 ↗ beta barrels › SH3 › SH3 › SH3 › EFP_N 0.89 83.0 8.09e-01 100.0% 100.0%
4201878 4.1.1.57 ↗ beta barrels › SH3 › SH3 › SH3 › EFP_N 0.88 81.0 7.85e-01 98.3% 98.5%
4038269 4.1.1.57 ↗ beta barrels › SH3 › SH3 › SH3 › EFP_N 0.88 82.0 7.97e-01 100.0% 100.0%
4213539 4.1.1.57 ↗ beta barrels › SH3 › SH3 › SH3 › EFP_N 0.88 79.0 7.69e-01 96.7% 96.9%
142633 4.1.1.57 ↗ beta barrels › SH3 › SH3 › SH3 › EFP_N 0.88 79.0 7.68e-01 98.3% 98.5%
4345080 4.1.1.57 ↗ beta barrels › SH3 › SH3 › SH3 › EFP_N 0.86 79.0 7.66e-01 98.3% 98.5%
4146937 4.1.1.57 ↗ beta barrels › SH3 › SH3 › SH3 › EFP_N 0.86 78.0 7.57e-01 98.3% 98.5%
4524363 4.1.1.57 ↗ beta barrels › SH3 › SH3 › SH3 › EFP_N 0.86 77.0 7.54e-01 98.3% 98.5%
4284764 4.1.1.57 ↗ beta barrels › SH3 › SH3 › SH3 › EFP_N 0.86 77.0 7.54e-01 98.3% 98.5%
3959531 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.85 79.0 7.44e-01 100.0% 94.3%
4101580 4.1.1.57 ↗ beta barrels › SH3 › SH3 › SH3 › EFP_N 0.85 77.0 7.52e-01 98.3% 98.5%
4086925 4.1.1.57 ↗ beta barrels › SH3 › SH3 › SH3 › EFP_N 0.85 76.0 7.46e-01 98.3% 96.9%
3829096 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.80 63.0 3.64e-01 85.0% 14.6%
3471772 4.1.1.311 ↗ beta barrels › SH3 › SH3 › SH3 › BRWD_AD 0.79 71.0 6.09e-01 96.7% 92.2%
3767975 220.1.1.38 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › UCH_N 0.75 59.0 4.85e-01 86.7% 72.7%
3603127 1.1.13.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins 0.74 51.0 4.49e-01 73.3% 91.1%
4931822 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.73 62.0 6.02e-01 95.0% 84.6%
4999430 4.11.1.0 ↗ beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase 0.72 66.0 5.15e-01 100.0% 51.7%
4271974 4.1.1.3 ↗ beta barrels › SH3 › SH3 › SH3 › KOW 0.72 59.0 5.82e-01 90.0% 87.5%
3212772 4.8.1.6 ↗ beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Tudor-knot 0.71 58.0 5.47e-01 91.7% 82.4%
4888987 4.1.1.6 ↗ beta barrels › SH3 › SH3 › SH3 › KOW,40S_S4_C 0.71 57.0 5.46e-01 86.7% 78.3%
3741680 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.71 58.0 6.03e-01 88.3% 100.0%
3698762 4.1.1.6 ↗ beta barrels › SH3 › SH3 › SH3 › KOW,40S_S4_C 0.71 59.0 4.88e-01 90.0% 55.3%
4964768 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.71 61.0 6.18e-01 95.0% 100.0%
2675820 4.1.1.93 ↗ beta barrels › SH3 › SH3 › SH3 › 40S_S4_C 0.71 57.0 4.91e-01 86.7% 60.4%
3238955 4.1.1.377 ↗ beta barrels › SH3 › SH3 › SH3 › MSL3_chromo-like 0.70 59.0 5.41e-01 95.0% 78.8%
4605602 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.70 56.0 5.52e-01 86.7% 83.1%
4468322 218.1.1.8 ↗ a+b two layers › Enolase-N/ribosomal protein › Enolase N-terminal domain-like › Enolase N-terminal domain-like › HrcA 0.70 49.0 4.12e-01 73.3% 99.0%
5017073 4.11.1.0 ↗ beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase 0.70 61.0 4.61e-01 100.0% 45.3%
3927335 206.1.1.0 ↗ a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase 0.70 58.0 3.62e-01 91.7% 31.1%
3315471 4.8.1.10 ↗ beta barrels › SH3 › Chromo domain-like › Chromo domain-like › MSL3_chromo-like 0.69 58.0 5.16e-01 91.7% 69.4%
3272228 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.68 53.0 3.37e-01 83.3% 23.2%
3586469 4.1.1.287 ↗ beta barrels › SH3 › SH3 › SH3 › DUF5641 0.68 61.0 5.46e-01 100.0% 80.0%
3396594 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.68 57.0 5.71e-01 91.7% 100.0%
5020252 219.1.1.0 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases 0.68 60.0 4.78e-01 100.0% 56.7%
3451280 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.67 59.0 4.34e-01 98.3% 37.4%
3564972 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.67 58.0 5.54e-01 96.7% 85.7%
3660358 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.67 57.0 5.75e-01 95.0% 95.0%
3592540 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.67 58.0 5.87e-01 95.0% 95.0%
4999741 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.67 56.0 5.18e-01 96.7% 81.2%
4021761 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.66 56.0 3.25e-01 93.3% 84.4%
3701345 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.66 56.0 5.12e-01 93.3% 97.5%
3478898 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.66 54.0 5.29e-01 90.0% 86.2%
3725498 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.66 56.0 5.38e-01 98.3% 100.0%
4557124 4.6.1.6 ↗ beta barrels › SH3 › PRC-barrel domain › PRC-barrel domain › PRC_RimM 0.66 55.0 5.31e-01 95.0% 90.0%
3215500 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.66 51.0 5.32e-01 85.0% 100.0%
3247995 4.1.1.33 ↗ beta barrels › SH3 › SH3 › SH3 › Myosin_N 0.66 54.0 5.12e-01 90.0% 77.1%
3660964 4.1.1.6 ↗ beta barrels › SH3 › SH3 › SH3 › KOW,40S_S4_C 0.66 57.0 4.82e-01 96.7% 58.0%
4208181 4.1.1.70 ↗ beta barrels › SH3 › SH3 › SH3 › Tsr0524-like 0.65 51.0 5.03e-01 88.3% 98.5%
4373440 218.1.1.8 ↗ a+b two layers › Enolase-N/ribosomal protein › Enolase N-terminal domain-like › Enolase N-terminal domain-like › HrcA 0.65 48.0 4.10e-01 78.3% 68.4%
3236474 206.1.1.1 ↗ a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase 0.65 53.0 3.33e-01 91.7% 29.0%
3331028 5.1.4.1 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.65 54.0 3.24e-01 93.3% 18.6%
3703749 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.65 49.0 4.88e-01 86.7% 83.1%
3591224 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.64 48.0 5.04e-01 83.3% 100.0%
5048696 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.64 54.0 3.98e-01 98.3% 35.3%
3023952 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.64 53.0 4.42e-01 98.3% 80.5%
3928760 206.1.1.0 ↗ a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase 0.63 51.0 3.21e-01 91.7% 24.2%
3264879 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.63 49.0 4.74e-01 95.0% 77.1%
3616467 5.1.12.2 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › PERK and Ire1 luminal domains › eIF2A 0.63 52.0 3.13e-01 93.3% 90.7%
4376886 4.1.1.241 ↗ beta barrels › SH3 › SH3 › SH3 › NifZ 0.63 50.0 4.65e-01 91.7% 96.2%
3393297 4.1.1.9 ↗ beta barrels › SH3 › SH3 › SH3 › TUDOR 0.63 56.0 5.10e-01 100.0% 78.8%
4027502 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.62 51.0 5.04e-01 95.0% 95.4%
3717566 5.1.3.28 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › BNR_3 0.62 50.0 3.34e-01 93.3% 55.1%
4632722 2003.1.2.16 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FAD_binding_3,NAD_binding_8 0.61 47.0 3.07e-01 83.3% 54.1%
3598995 5.1.2.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 5-bladed 0.61 48.0 3.07e-01 88.3% 92.1%
3923766 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.61 52.0 4.28e-01 98.3% 81.7%
3613250 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.61 51.0 2.97e-01 91.7% 21.0%
3673266 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.61 45.0 4.09e-01 80.0% 83.5%
3679362 4.1.1.351 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_ISE2 0.60 46.0 4.19e-01 86.7% 96.5%
3597255 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.59 45.0 4.12e-01 86.7% 62.4%
4878518 2003.1.2.6 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FMO-like,NAD_binding_8 0.59 47.0 3.53e-01 86.7% 91.2%
4025829 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.59 45.0 4.60e-01 86.7% 94.5%
4982354 4.7.1.0 ↗ beta barrels › SH3 › RNase P subunit p29 › RNase P subunit p29 0.58 45.0 4.45e-01 90.0% 93.8%
3206218 2003.1.2.6 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FMO-like,NAD_binding_8 0.58 45.0 2.84e-01 86.7% 40.6%
3396897 4.1.1.54 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_2 0.58 43.0 4.31e-01 85.0% 95.2%
4931666 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.58 46.0 3.81e-01 93.3% 79.2%
4139173 325.1.7.0 ↗ a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif 0.58 40.0 3.49e-01 75.0% 73.0%
1821014 4.1.1.70 ↗ beta barrels › SH3 › SH3 › SH3 › Tsr0524-like 0.56 43.0 4.26e-01 90.0% 100.0%
3250440 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.56 49.0 3.78e-01 96.7% 88.9%
4079201 2.4.1.2 ↗ beta barrels › OB-fold › MOP-like › MOP-like › TOBE_2 0.55 44.0 3.62e-01 90.0% 48.2%
6331 331.3.1.0 ↗ a+b two layers › TBP-like › Bet v1-like › Bet v1-like 0.55 44.0 3.45e-01 88.3% 70.7%
4236717 2.4.1.2 ↗ beta barrels › OB-fold › MOP-like › MOP-like › TOBE_2 0.53 43.0 3.53e-01 93.3% 50.8%
3929340 2003.1.2.24 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Pyr_redox_2 0.51 43.0 3.31e-01 96.7% 72.4%
D2 high residues 140-215
PDB
Domain cluster: rep: IMGVR_UViG_2554235495_000005-2554235495-2556168311__D36-102
CATH (37)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3doaA01 2.30.310.10 Mainly Beta › Roll › ibrinogen binding protein from staphylococcus aureus fold › ibrinogen binding protein from staphylococcus aureus domain 0.64 47.0 3.71e-01 77.6% 47.7%
2lnjA00 3.40.1000.10 Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › Mog1/PsbP, alpha/beta/alpha sandwich 0.62 46.0 3.55e-01 78.9% 41.2%
2o18A00 3.10.520.10 Alpha Beta › Roll › T-fold › ApbE-like domains 0.61 45.0 3.03e-01 78.9% 69.4%
1r9fA01 3.30.390.180 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › RNA silencing suppressor P19 0.61 44.0 3.90e-01 97.4% 52.3%
4qunA00 3.90.190.10 Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily 0.60 48.0 3.27e-01 86.8% 43.5%
1wchA00 3.90.190.10 Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily 0.60 48.0 3.20e-01 86.8% 40.3%
3anzC00 2.70.240.10 Mainly Beta › Distorted Sandwich › Leukocidin-like › Leukocidin/porin MspA 0.60 45.0 3.03e-01 80.3% 88.1%
1gqgC02 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.59 43.0 3.20e-01 76.3% 79.4%
2it9A00 2.30.31.10 Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › Transcriptional Coactivator Pc4; Chain A 0.59 47.0 4.12e-01 89.5% 60.8%
3pg4A00 3.60.15.10 Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like 0.59 44.0 3.11e-01 78.9% 66.5%
3atsA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.59 43.0 3.76e-01 77.6% 95.7%
5mgyA00 3.10.520.10 Alpha Beta › Roll › T-fold › ApbE-like domains 0.59 44.0 2.94e-01 80.3% 67.2%
1q67A01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.58 43.0 3.51e-01 78.9% 79.3%
5fgoA00 3.10.450.700 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.57 41.0 4.46e-01 77.6% 91.9%
1wzvA00 3.10.110.10 Alpha Beta › Roll › Ubiquitin Conjugating Enzyme › Ubiquitin Conjugating Enzyme 0.57 47.0 3.79e-01 92.1% 72.0%
2giaA00 2.30.31.40 Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › 0.57 43.0 3.55e-01 85.5% 64.9%
2kigA00 2.30.29.110 Mainly Beta › Roll › PH-domain like › 0.56 40.0 3.22e-01 76.3% 91.9%
3n91A02 2.40.128.420 Mainly Beta › Beta Barrel › Lipocalin › 0.56 42.0 3.58e-01 82.9% 69.9%
2k4vA00 3.30.160.370 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Domain of unknown function DUF5064 0.56 46.0 3.96e-01 92.1% 65.6%
7yh1A01 3.30.450.30 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Dynein light chain 2a, cytoplasmic 0.56 40.0 3.49e-01 75.0% 53.5%
3cxgA00 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.56 46.0 3.97e-01 92.1% 93.4%
3cm1A00 2.30.31.20 Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › Sporulation-specific cell division protein SsgB 0.56 44.0 3.62e-01 85.5% 58.8%
2lezA00 3.30.2450.10 Alpha Beta › 2-Layer Sandwich › Secreted effector protein pipB2 fold › Secreted effector protein pipB2 0.55 44.0 3.76e-01 85.5% 73.3%
3q9oA01 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.55 49.0 3.56e-01 100.0% 49.5%
1a7tA00 3.60.15.10 Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like 0.55 42.0 3.07e-01 84.2% 68.3%
1kyfA01 2.60.40.1230 Mainly Beta › Sandwich › Immunoglobulin-like › Gamma-adaptin ear (GAE) domain 0.54 45.0 3.87e-01 97.4% 85.8%
1fu1A01 2.170.210.10 Mainly Beta › Beta Complex › Dna Repair Protein Xrcc4; Chain: A, domain 1 › DNA double-strand break repair and VJ recombination XRCC4, N-terminal 0.54 37.0 3.24e-01 71.1% 82.2%
6t5kC00 3.60.15.10 Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like 0.53 42.0 3.08e-01 88.2% 82.6%
3k44B00 3.30.2450.30 Alpha Beta › 2-Layer Sandwich › Secreted effector protein pipB2 fold › 0.53 47.0 3.87e-01 100.0% 62.9%
1v7pB00 3.10.100.10 Alpha Beta › Roll › Mannose-Binding Protein A; Chain A › Mannose-Binding Protein A, subunit A 0.53 42.0 3.60e-01 88.2% 78.7%
4fczA00 3.10.450.710 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › Tgt2/MlaC 0.52 37.0 2.94e-01 77.6% 81.4%
1vw4M01 2.30.30.790 Mainly Beta › Roll › SH3 type barrels. › 0.52 45.0 3.81e-01 98.7% 85.6%
4e5xG00 2.60.40.3530 Mainly Beta › Sandwich › Immunoglobulin-like › 0.52 38.0 3.51e-01 78.9% 68.7%
2hn1A01 3.30.460.20 Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › CorA soluble domain-like 0.51 38.0 3.11e-01 78.9% 88.7%
2qm4A01 2.170.210.10 Mainly Beta › Beta Complex › Dna Repair Protein Xrcc4; Chain: A, domain 1 › DNA double-strand break repair and VJ recombination XRCC4, N-terminal 0.51 39.0 3.18e-01 81.6% 81.8%
3voqA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.51 46.0 4.01e-01 100.0% 94.8%
1imuA00 3.30.160.100 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Ribosome hibernation promotion factor-like 0.50 37.0 3.45e-01 84.2% 72.9%
ECOD (47)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5008587 2484.1.1.330 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DUF460 0.71 48.0 3.23e-01 71.1% 26.9%
3213262 145.1.1.0 ↗ alpha arrays › F-box domain › F-box domain › F-box domain 0.70 45.0 4.07e-01 71.1% 49.0%
5025256 2002.1.1.120 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM 0.67 44.0 2.77e-01 77.6% 13.5%
3350383 2003.1.5.28 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › mRNA_G-N7_MeTrfase 0.63 55.0 3.71e-01 97.4% 45.2%
None — 0.63 55.0 3.71e-01 97.4% 44.6%
None — 0.63 54.0 3.68e-01 97.4% 44.8%
3932999 2007.2.3.21 ↗ a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › (Phosphotyrosine protein) phosphatases II › Y_phosphatase, PTP-SAK 0.62 50.0 3.26e-01 86.8% 43.0%
4528719 4.1.1.438 ↗ beta barrels › SH3 › SH3 › SH3 › PF27440 0.62 44.0 4.71e-01 73.7% 89.2%
4946414 301.13.1.0 ↗ a+b three layers › Bacillus chorismate mutase-like › DAK1/DegV C-terminal domain › DAK1/DegV C-terminal domain 0.61 42.0 3.57e-01 71.1% 54.5%
4959982 3110.1.1.0 ↗ a/b three-layered sandwiches › STT3/PglB/AglB core domain › STT3/PglB/AglB core domain › STT3/PglB/AglB core domain 0.60 42.0 3.05e-01 72.4% 37.1%
3902169 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.59 42.0 3.60e-01 75.0% 72.0%
5791 295.1.1.6 ↗ a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › DUF1818 0.59 47.0 4.13e-01 89.5% 61.3%
3865654 220.1.1.52 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › SNX17_FERM_C 0.59 41.0 3.56e-01 73.7% 75.8%
3591633 1021.1.1.0 ↗ a+b two layers › C-terminal domain in RNA helicases › C-terminal domain in RNA helicases › C-terminal domain in RNA helicases 0.59 38.0 3.41e-01 71.1% 45.5%
3518499 5.1.4.1 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.58 40.0 2.76e-01 72.4% 40.0%
3968432 1.1.5.0 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 0.58 40.0 3.62e-01 71.1% 97.1%
3970647 274.1.1.0 ↗ a+b two layers › Pili subunits › Pili subunits › Pili subunits 0.58 46.0 3.53e-01 85.5% 43.9%
3390537 219.1.1.0 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases 0.58 47.0 3.11e-01 92.1% 77.6%
4366777 5.1.5.205 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › PF27482 0.58 44.0 2.79e-01 80.3% 39.5%
3736600 2003.1.1.22 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › GFO_IDH_MocA 0.58 43.0 2.76e-01 78.9% 50.6%
3706756 5084.5.1.0 ↗ beta barrels › Outer membrane meander beta-barrels › Porins › Porin 0.58 41.0 2.84e-01 76.3% 36.4%
3927894 277.1.1.1 ↗ a+b two layers › PX domain › PX domain › PX domain › PX 0.57 39.0 3.28e-01 72.4% 68.9%
4981877 221.7.1.0 ↗ a+b two layers › beta-Grasp › E2-binding domain of E1 › E2-binding domain of E1 0.57 44.0 4.24e-01 81.6% 88.2%
3934141 2004.1.1.0 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.57 43.0 3.29e-01 82.9% 95.8%
3993689 4099.1.1.0 ↗ a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like 0.56 42.0 4.24e-01 78.9% 100.0%
185116 295.1.1.2 ↗ a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › SsgA 0.56 44.0 3.61e-01 85.5% 58.4%
3824049 5.1.3.118 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_3 0.55 40.0 2.76e-01 77.6% 31.1%
3407032 5.1.4.1 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.55 38.0 2.45e-01 72.4% 24.6%
3479397 4292.2.1.0 ↗ a+b two layers › FlaG-like › MAGUK binding stalk (MBS) domain › MAGUK binding stalk (MBS) domain 0.55 47.0 4.31e-01 98.7% 77.1%
3943954 12.3.1.3 ↗ beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › Aldose_epim 0.55 40.0 2.74e-01 77.6% 99.3%
3686676 298.1.1.0 ↗ a+b two layers › FwdE/GAPDH domain-like › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 0.55 41.0 3.13e-01 80.3% 99.4%
3938671 2007.2.3.1 ↗ a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › (Phosphotyrosine protein) phosphatases II › Y_phosphatase 0.54 43.0 2.84e-01 86.8% 37.0%
3235213 220.1.1.1 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.54 40.0 3.40e-01 78.9% 85.4%
None — 0.54 42.0 2.50e-01 86.8% 21.7%
None — 0.54 42.0 2.84e-01 86.8% 39.2%
3622886 5.1.5.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed 0.54 42.0 2.45e-01 85.5% 20.4%
3239846 2007.2.3.1 ↗ a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › (Phosphotyrosine protein) phosphatases II › Y_phosphatase 0.53 41.0 2.87e-01 88.2% 43.7%
3938060 2007.2.3.1 ↗ a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › (Phosphotyrosine protein) phosphatases II › Y_phosphatase 0.53 42.0 3.23e-01 86.8% 51.4%
3963036 330.2.1.1 ↗ a+b two layers › dsRBD-like › Ribosome binding protein Y (YfiA homologue) › Ribosome binding protein Y (YfiA homologue) › Ribosomal_S30AE 0.53 40.0 3.73e-01 84.2% 84.0%
3289254 220.1.1.82 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › bPH_6 0.52 36.0 3.35e-01 71.1% 67.4%
4960871 4121.1.1.1 ↗ a+b three layers › CorA soluble domain-like › CorA soluble domain-like › CorA soluble domain-like › CorA 0.52 37.0 2.55e-01 78.9% 22.0%
5022924 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.52 41.0 4.05e-01 84.2% 88.7%
3998279 9.1.1.0 ↗ beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins 0.51 40.0 3.65e-01 88.2% 86.4%
3387925 243.4.1.0 ↗ a+b two layers › Cystatin-like › DsbC/DsbG N-terminal domain-like › DsbC/DsbG N-terminal domain-like 0.51 38.0 4.07e-01 78.9% 96.9%
3505384 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.51 39.0 2.56e-01 81.6% 95.3%
5032877 5.1.4.665 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › FG-GAP_2 0.51 44.0 2.80e-01 97.4% 95.9%
5045772 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.50 34.0 3.02e-01 71.1% 73.9%