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MW460246.1__QRE00463.1__X__00105
Bact-VirMW460246.1__QRE00463.1__X__00105
Identity
- Accession:
- MW460246 ↗
- Kingdom:
- phage
Quality
62.6
mean pLDDT
Taxonomy
Heunggongvirae›
Uroviricota›
Caudoviricetes›
Lindbergviridae›
Irusalimvirus›
Burkholderia_phage_BCSR52
TaxID: 2805748
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 6-83
D2
high
residues 95-155
Domain cluster:
representative
CATH (18)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5ikuA01 | 2.60.120.380 | Mainly Beta › Sandwich › Jelly Rolls › | 0.65 | 43.0 | 3.65e-01 | 91.8% | 40.4% |
| 1t0tV02 | 3.30.70.1030 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Apc35880; domain 1 | 0.62 | 50.0 | 4.17e-01 | 90.2% | 89.2% |
| 2op5B01 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.61 | 49.0 | 4.17e-01 | 88.5% | 100.0% |
| 5ixuA00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.61 | 48.0 | 4.11e-01 | 88.5% | 93.1% |
| 6s2wA01 | 3.30.2260.10 | Alpha Beta › 2-Layer Sandwich › ERH-like fold › Enhancer of rudimentary | 0.60 | 49.0 | 4.39e-01 | 86.9% | 78.0% |
| 3oqgA00 | 3.40.1440.50 | Alpha Beta › 3-Layer(aba) Sandwich › GIY-YIG endonuclease › | 0.60 | 46.0 | 3.45e-01 | 90.2% | 36.9% |
| 1earA02 | 3.30.70.790 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › UreE, C-terminal domain | 0.59 | 35.0 | 3.44e-01 | 73.8% | 50.7% |
| 2od6C00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.59 | 48.0 | 4.03e-01 | 90.2% | 95.3% |
| 3tj8A02 | 3.30.70.790 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › UreE, C-terminal domain | 0.58 | 35.0 | 3.33e-01 | 75.4% | 50.0% |
| 5k2mA02 | 3.30.1490.20 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › ATP-grasp fold, A domain | 0.58 | 42.0 | 4.06e-01 | 90.2% | 69.6% |
| 3kl0D01 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.57 | 38.0 | 3.22e-01 | 90.2% | 39.6% |
| 1s7hA01 | 3.30.70.930 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.56 | 47.0 | 4.31e-01 | 91.8% | 98.8% |
| 3vpbA02 | 3.30.1490.20 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › ATP-grasp fold, A domain | 0.56 | 40.0 | 3.93e-01 | 90.2% | 69.6% |
| 1yk9A00 | 3.30.70.1230 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Nucleotide cyclase, GGDEF domain | 0.55 | 47.0 | 3.41e-01 | 98.4% | 68.5% |
| 1pzxA02 | 2.20.28.50 | Mainly Beta › Single Sheet › Rubrerythrin, domain 2 › DegV, N-terminal domain, peripheral subdomain | 0.55 | 32.0 | 3.81e-01 | 85.2% | 100.0% |
| 1u8sA01 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.54 | 44.0 | 3.94e-01 | 90.2% | 95.3% |
| 4bt2A02 | 3.30.1330.80 | Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › Hypothetical protein, similar to alpha- acetolactate decarboxylase; domain 2 | 0.54 | 33.0 | 2.60e-01 | 75.4% | 30.1% |
| 5kfzA04 | 3.30.1490.100 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › DNA polymerase, Y-family, little finger domain | 0.50 | 39.0 | 3.25e-01 | 91.8% | 51.2% |
ECOD (17)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 185720 | 3397.1.1.0 ↗ | a+b complex topology › Tic22 › Tic22 › Tic22 | 0.70 | 59.0 | 4.90e-01 | 93.4% | 67.6% |
| 3545434 | 11.1.1.1066 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig_NOMO | 0.66 | 43.0 | 4.01e-01 | 90.2% | 53.3% |
| 4959201 | 815.1.1.1 ↗ | a+b two layers › Chromosomal protein MC1 › Chromosomal protein MC1 › Chromosomal protein MC1 › MC1 | 0.62 | 41.0 | 3.61e-01 | 91.8% | 44.2% |
| 2579422 | 4326.1.1.1 ↗ | a+b two layers › ERH-like › ERH-like › ERH-like › ER | 0.60 | 52.0 | 4.50e-01 | 95.1% | 66.0% |
| 3810572 | 2003.1.5.26 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_28 | 0.57 | 39.0 | 2.37e-01 | 70.5% | 16.3% |
| 3857592 | 382.1.1.1 ↗ | few secondary structure elements › Snake toxin-like › Snake toxin-like › Snake toxin-like › UPAR_LY6 | 0.56 | 47.0 | 4.23e-01 | 98.4% | 93.3% |
| 3540023 | 382.1.1.1 ↗ | few secondary structure elements › Snake toxin-like › Snake toxin-like › Snake toxin-like › UPAR_LY6 | 0.56 | 47.0 | 4.22e-01 | 98.4% | 94.4% |
| 3338287 | 221.1.1.166 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › PF26130 | 0.55 | 38.0 | 3.79e-01 | 91.8% | 67.7% |
| 3645561 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.55 | 41.0 | 3.03e-01 | 78.7% | 78.1% |
| 4889219 | 3937.1.1.3 ↗ | alpha bundles › Connexin 26 › Connexin 26 › Connexin 26 › Pannexin_like | 0.54 | 46.0 | 2.98e-01 | 98.4% | 88.6% |
| 3325376 | 221.1.1.4 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › PB1 | 0.54 | 35.0 | 3.38e-01 | 91.8% | 57.1% |
| 3715244 | 320.4.1.0 ↗ | a+b two layers › R3H domain-like › PUB domain › PUB domain | 0.53 | 39.0 | 2.84e-01 | 80.3% | 62.4% |
| 4966132 | 221.6.1.0 ↗ | a+b two layers › beta-Grasp › MM3350-like › MM3350-like | 0.53 | 42.0 | 3.22e-01 | 90.2% | 76.0% |
| 3786289 | 210.1.3.5 ↗ | a+b four layers › Ntn/PP2C › Ntn › Class II glutamine amidotransferases › GATase_7 | 0.53 | 39.0 | 2.78e-01 | 83.6% | 70.2% |
| 4952738 | 322.1.1.2 ↗ | a+b two layers › HPr-like › HPr-like › HPr-like › 3H | 0.52 | 40.0 | 3.42e-01 | 88.5% | 54.1% |
| 3580369 | 4357.1.1.0 ↗ | beta barrels › WWE domain › WWE domain › WWE domain | 0.51 | 42.0 | 3.12e-01 | 91.8% | 95.1% |
| 3606408 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.51 | 44.0 | 3.81e-01 | 96.7% | 62.1% |