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MW460249.1__QRE00636.1__X__00060
Bact-VirMW460249.1__QRE00636.1__X__00060
Identity
- Accession:
- MW460249 ↗
- Kingdom:
- phage
Quality
62.6
mean pLDDT
Taxonomy
TaxID: 2805750
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 202-258
Domain cluster:
rep: NC_052660.1__YP_009986652.1__JR325_gp173__00276__D78-150
CATH (7)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3kihC01 | 2.20.25.510 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › | 0.64 | 35.0 | 4.29e-01 | 77.2% | 88.2% |
| 4f7uG00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.58 | 47.0 | 4.44e-01 | 87.7% | 85.3% |
| 5aguA03 | 3.10.150.10 | Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 | 0.56 | 41.0 | 3.30e-01 | 80.7% | 85.7% |
| 1a48A01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.54 | 36.0 | 2.93e-01 | 84.2% | 36.0% |
| 2x0qA01 | 3.30.310.280 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › | 0.53 | 39.0 | 3.03e-01 | 82.5% | 34.6% |
| 2r6uA01 | 3.10.180.10 | Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 | 0.53 | 37.0 | 2.99e-01 | 77.2% | 36.9% |
| 4jbmB01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.52 | 37.0 | 3.25e-01 | 78.9% | 97.9% |
ECOD (4)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4228977 | 2004.1.1.307 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Spore_III_AA | 0.58 | 50.0 | 3.19e-01 | 100.0% | 33.9% |
| 4177906 | 5.2.1.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-pinwheel › beta-pinwheel › DNA_gyraseA_C | 0.55 | 44.0 | 2.82e-01 | 89.5% | 87.1% |
| 3583756 | 2.1.1.29 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Rep-A_N | 0.53 | 44.0 | 3.32e-01 | 93.0% | 82.1% |
| 3449498 | 4286.1.1.1 ↗ | beta complex topology › At5g01610-like › At5g01610-like › At5g01610-like › DUF538 | 0.52 | 38.0 | 3.03e-01 | 78.9% | 80.0% |
D2
medium
residues 4-107
Domain cluster:
representative
CATH (1)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 8e9gK01 | 1.10.287.3510 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.59 | 48.0 | 5.16e-01 | 89.4% | 98.9% |
ECOD (4)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3699813 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.65 | 46.0 | 3.08e-01 | 72.1% | 52.2% |
| 3959306 | 150.8.1.0 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › PPE › PPE | 0.56 | 38.0 | 3.44e-01 | 70.2% | 84.1% |
| 3962973 | 5050.1.1.0 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter | 0.55 | 43.0 | 3.94e-01 | 82.7% | 80.7% |
| 5017220 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.54 | 33.0 | 4.06e-01 | 80.8% | 98.5% |