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MW462221.2__WKW83126.1__X__00027

Bact-Vir

MW462221.2__WKW83126.1__X__00027

Identity

Accession:
MW462221 ↗
Kingdom:
phage

Quality

92.6 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 3-120
PDB
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF06995.17 best Phage_P2_GpU 72.6 3.00e-20 98.3% 95.0%
CATH (27)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2x8kA01 2.40.30.200 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › 0.75 55.0 5.82e-01 100.0% 85.7%
1xkpB00 3.30.1460.10 Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › 0.66 38.0 3.84e-01 93.2% 54.5%
2oq5A02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.66 43.0 4.56e-01 100.0% 75.0%
4w64B00 2.30.110.20 Mainly Beta › Roll › Pnp Oxidase; Chain A › Hcp1-like 0.66 61.0 5.46e-01 100.0% 77.5%
1bdfA01 3.30.1360.10 Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › RNA polymerase, RBP11-like subunit 0.64 40.0 4.20e-01 93.2% 68.9%
2k4qA00 4.10.410.40 Few Secondary Structures › Irregular › Factor Xa Inhibitor › 0.62 58.0 5.26e-01 100.0% 82.7%
1k8kD01 3.30.1460.20 Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › 0.62 42.0 3.87e-01 92.4% 54.3%
2c5dC01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.61 40.0 4.26e-01 93.2% 75.0%
2q83B01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.61 37.0 4.01e-01 92.4% 70.7%
3io1A02 3.30.70.360 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.60 39.0 4.02e-01 83.1% 67.2%
4noiA01 3.30.1360.10 Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › RNA polymerase, RBP11-like subunit 0.60 37.0 3.95e-01 92.4% 69.9%
3a27A00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.60 38.0 3.09e-01 91.5% 34.2%
1s9iB01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.59 35.0 3.93e-01 93.2% 75.3%
6wubf01 3.30.70.60 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S6/Translation elongation factor EF1B 0.59 36.0 3.99e-01 94.1% 76.6%
2j5aA00 3.30.70.60 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S6/Translation elongation factor EF1B 0.57 37.0 3.91e-01 94.9% 71.7%
4f0qD01 2.30.280.20 Mainly Beta › Roll › PUA domain-like › 0.57 53.0 4.06e-01 100.0% 56.9%
3m86A00 2.60.40.2020 Mainly Beta › Sandwich › Immunoglobulin-like › 0.57 34.0 3.50e-01 90.7% 62.2%
2ftrA00 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.55 31.0 3.36e-01 82.2% 62.1%
4hudA01 3.30.2000.40 Alpha Beta › 2-Layer Sandwich › STM4215-like › Myoviridae tail sheath stabiliser 0.55 50.0 4.10e-01 100.0% 74.8%
1ry9A00 3.30.1460.10 Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › 0.53 31.0 3.06e-01 93.2% 50.4%
6ruiB07 2.40.50.150 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II, Rpb2 subunit, wall domain 0.53 43.0 4.25e-01 88.1% 92.9%
1jyoA00 3.30.1460.10 Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › 0.53 31.0 3.01e-01 93.2% 50.0%
4jb9H01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.52 38.0 3.73e-01 92.4% 69.5%
5k8mA02 3.30.70.360 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.50 37.0 3.59e-01 91.5% 68.7%
2ozpA02 3.30.360.10 Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 0.50 46.0 4.09e-01 100.0% 94.6%
2q8kA01 3.90.230.10 Alpha Beta › Alpha-Beta Complex › Creatine Amidinohydrolase › Creatinase/methionine aminopeptidase superfamily 0.50 40.0 2.99e-01 84.7% 67.7%
3anzC00 2.70.240.10 Mainly Beta › Distorted Sandwich › Leukocidin-like › Leukocidin/porin MspA 0.50 43.0 3.23e-01 94.1% 68.7%
ECOD (54)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3944239 1.1.13.51 beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_P2_GpU 0.92 76.0 8.10e-01 100.0% 95.2%
3980535 1.1.13.51 beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_P2_GpU 0.88 83.0 7.93e-01 100.0% 88.1%
5004559 1.1.13.75 beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › CIS_tube 0.82 76.0 7.22e-01 99.2% 100.0%
5062396 1.1.13.0 beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins 0.81 75.0 7.02e-01 97.5% 96.4%
3966825 1.1.13.51 beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_P2_GpU 0.80 76.0 7.56e-01 100.0% 96.7%
3969448 1.1.13.0 beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins 0.79 66.0 6.94e-01 97.5% 99.0%
3941539 1.1.13.40 beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_min_tail 0.78 64.0 6.77e-01 98.3% 97.1%
3580020 1.1.13.0 beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins 0.78 71.0 5.99e-01 100.0% 79.5%
2642579 1.1.13.6 beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_tail_2 0.76 69.0 6.65e-01 100.0% 87.7%
3965192 1.1.13.67 beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › DUF2460 0.75 66.0 6.78e-01 98.3% 97.4%
3587262 1.1.13.0 beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins 0.74 60.0 6.31e-01 100.0% 95.2%
4995818 1.1.13.0 beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins 0.74 61.0 6.06e-01 100.0% 83.2%
3981654 1.1.13.40 beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_min_tail 0.73 61.0 6.32e-01 98.3% 96.4%
3943681 1.1.13.47 beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Dit_like 0.73 68.0 6.27e-01 100.0% 94.0%
4873215 1.1.13.11 beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › DUF2001 0.72 66.0 6.20e-01 100.0% 83.6%
3964955 1.1.13.0 beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins 0.71 67.0 5.99e-01 100.0% 88.7%
3942828 1.1.13.39 beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › KPP10_Orf10 0.71 65.0 6.09e-01 100.0% 86.9%
2471637 1.1.5.24 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Phage_T4_gp19 0.70 65.0 5.96e-01 100.0% 86.6%
2471641 1.1.5.24 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Phage_T4_gp19 0.70 64.0 5.92e-01 100.0% 81.9%
2832216 1.1.5.24 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Phage_T4_gp19 0.69 62.0 5.74e-01 100.0% 88.2%
4966226 512.1.1.2 a+b two layers › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › PmbA_TldD_2nd 0.61 37.0 3.84e-01 100.0% 64.5%
5052132 512.1.1.0 a+b two layers › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) 0.61 36.0 3.77e-01 100.0% 63.6%
4956107 512.1.1.2 a+b two layers › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › PmbA_TldD_2nd 0.60 37.0 3.73e-01 100.0% 60.8%
5001271 512.1.1.2 a+b two layers › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › PmbA_TldD_2nd 0.60 37.0 3.62e-01 100.0% 56.2%
5042696 512.1.1.2 a+b two layers › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › PmbA_TldD_2nd 0.59 37.0 3.83e-01 100.0% 66.4%
4971338 512.1.1.2 a+b two layers › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › PmbA_TldD_2nd 0.59 36.0 3.79e-01 100.0% 65.5%
4984649 512.1.1.0 a+b two layers › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) 0.59 35.0 3.66e-01 100.0% 62.7%
4934997 512.1.1.2 a+b two layers › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › PmbA_TldD_2nd 0.59 37.0 3.69e-01 100.0% 60.8%
5059745 512.1.1.2 a+b two layers › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › PmbA_TldD_2nd 0.59 36.0 3.65e-01 100.0% 60.0%
5067478 512.1.1.2 a+b two layers › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › PmbA_TldD_2nd 0.58 36.0 3.70e-01 100.0% 65.5%
3285689 512.1.1.0 a+b two layers › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) 0.58 34.0 3.69e-01 100.0% 68.0%
4989300 512.1.1.2 a+b two layers › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › PmbA_TldD_2nd 0.58 36.0 3.59e-01 100.0% 59.2%
5076771 512.1.1.2 a+b two layers › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › PmbA_TldD_2nd 0.58 36.0 3.77e-01 100.0% 67.3%
4998750 512.1.1.2 a+b two layers › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › PmbA_TldD_2nd 0.58 36.0 3.69e-01 100.0% 64.3%
70450 512.1.1.2 a+b two layers › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › PmbA_TldD_2nd 0.58 36.0 3.55e-01 100.0% 58.4%
3190573 706.2.1.0 beta complex topology › Head domain of nucleotide exchange factor GrpE › G5 and E repeats in surface protein G › G5 and E repeats in surface protein G 0.58 30.0 3.81e-01 92.4% 100.0%
5014544 304.8.1.82 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › PF27325 0.57 34.0 3.24e-01 90.7% 46.9%
5073338 512.1.1.0 a+b two layers › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) 0.57 36.0 3.68e-01 100.0% 64.3%
4888780 304.124.1.5 a+b two layers › Alpha-beta plaits › Phage tail protein-like › Phage tail protein-like › T4-gp15_tss 0.57 51.0 4.13e-01 100.0% 77.8%
4994607 512.1.1.2 a+b two layers › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › PmbA_TldD_2nd 0.57 35.0 3.55e-01 100.0% 61.7%
3570520 306.10.1.4 a+b two layers › Glucose permease domain IIB-like › H1 domain of KCTD12 › H1 domain of KCTD12 › KCTD11_21_C 0.57 38.0 3.55e-01 93.2% 55.2%
4956104 512.1.1.2 a+b two layers › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › PmbA_TldD_2nd 0.56 35.0 3.67e-01 100.0% 67.3%
4979864 512.1.1.2 a+b two layers › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › PmbA_TldD_2nd 0.56 36.0 3.45e-01 100.0% 55.6%
5054893 512.1.1.2 a+b two layers › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › PmbA_TldD_2nd 0.56 35.0 3.66e-01 100.0% 67.3%
3787893 206.1.1.70 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase, ABC1 0.55 39.0 2.81e-01 94.1% 26.4%
5041475 304.25.1.1 a+b two layers › Alpha-beta plaits › Bacterial exopeptidase dimerisation domain › Bacterial exopeptidase dimerisation domain › M20_dimer 0.55 39.0 3.91e-01 92.4% 71.7%
142824 512.1.1.2 a+b two layers › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › PmbA_TldD_2nd 0.55 35.0 3.52e-01 100.0% 60.5%
4944562 512.1.1.5 a+b two layers › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › PmbA_TldD_3rd 0.55 34.0 3.52e-01 100.0% 65.5%
4409103 512.1.1.2 a+b two layers › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › PmbA_TldD_2nd 0.54 35.0 3.44e-01 100.0% 60.0%
4117439 512.1.1.2 a+b two layers › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › PmbA_TldD_2nd 0.54 34.0 3.60e-01 100.0% 71.4%
4939309 512.1.1.2 a+b two layers › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › PmbA_TldD_2nd 0.53 33.0 3.45e-01 100.0% 67.3%
4979861 512.1.1.2 a+b two layers › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › PmbA_TldD_2nd 0.53 33.0 3.42e-01 100.0% 65.2%
4492722 512.1.1.2 a+b two layers › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › PmbA_TldD_2nd 0.52 33.0 3.16e-01 100.0% 52.9%
3795498 7.1.1.0 beta barrels › PDZ domain › PDZ domain › PDZ domain 0.50 43.0 4.11e-01 92.4% 91.9%