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MW462221.2__WKW83151.1__X__00053
Bact-VirMW462221.2__WKW83151.1__X__00053
Identity
- Accession:
- MW462221 ↗
- Kingdom:
- phage
Quality
90.9
mean pLDDT
Cluster
View cluster (16 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 22-165
Domain cluster:
rep: JN638751.1__AEO93438.1__G_178__00170__D22-38_243-354
CATH (47)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3foaB01 | 3.40.50.11780 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.75 | 63.0 | 5.40e-01 | 100.0% | 58.2% |
| 1yqeA02 | 3.40.50.10700 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › AF0625-like | 0.74 | 44.0 | 5.29e-01 | 99.3% | 88.5% |
| 3lftB02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.73 | 45.0 | 4.54e-01 | 100.0% | 59.9% |
| 4o5aA02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.72 | 46.0 | 4.77e-01 | 99.3% | 67.6% |
| 2gfqA02 | 3.40.50.10700 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › AF0625-like | 0.70 | 42.0 | 5.21e-01 | 99.3% | 97.7% |
| 4yo7A02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.70 | 45.0 | 4.44e-01 | 99.3% | 60.3% |
| 3ksmA02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.69 | 46.0 | 4.54e-01 | 100.0% | 63.3% |
| 2fepA02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.69 | 46.0 | 4.73e-01 | 99.3% | 70.0% |
| 3k9cA02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.69 | 45.0 | 4.56e-01 | 99.3% | 66.7% |
| 2pueA03 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.68 | 45.0 | 4.54e-01 | 99.3% | 66.0% |
| 3gv0A02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.67 | 44.0 | 4.63e-01 | 99.3% | 72.9% |
| 7x2pA01 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.64 | 45.0 | 3.95e-01 | 100.0% | 48.6% |
| 3c3kA02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.63 | 47.0 | 4.84e-01 | 99.3% | 80.4% |
| 3lmkA02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.63 | 41.0 | 3.93e-01 | 99.3% | 55.6% |
| 2qbuA01 | 3.40.1010.10 | Alpha Beta › 3-Layer(aba) Sandwich › Cobalt-precorrin-4 Transmethylase; domain 1 › Tetrapyrrole methylase, N-terminal domain | 0.62 | 43.0 | 4.48e-01 | 99.3% | 78.0% |
| 3k4hA02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.61 | 46.0 | 4.64e-01 | 99.3% | 78.9% |
| 2rjoA02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.61 | 45.0 | 4.27e-01 | 99.3% | 64.7% |
| 3bxpB00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.59 | 47.0 | 3.87e-01 | 84.7% | 56.9% |
| 7zr3A01 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.59 | 47.0 | 3.65e-01 | 84.7% | 42.8% |
| 4y9tA02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.59 | 45.0 | 4.24e-01 | 100.0% | 65.9% |
| 8fazD01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.58 | 45.0 | 3.84e-01 | 100.0% | 50.6% |
| 3g5jA00 | 3.40.250.10 | Alpha Beta › 3-Layer(aba) Sandwich › Oxidized Rhodanese; domain 1 › Rhodanese-like domain | 0.57 | 41.0 | 4.32e-01 | 100.0% | 82.3% |
| 5l2pA00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.57 | 48.0 | 3.79e-01 | 91.7% | 49.3% |
| 2aefA01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.57 | 37.0 | 4.10e-01 | 98.6% | 81.7% |
| 2cc0A00 | 3.20.20.370 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycoside hydrolase/deacetylase | 0.56 | 36.0 | 3.35e-01 | 97.9% | 47.9% |
| 1tpzA02 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.56 | 42.0 | 3.94e-01 | 98.6% | 63.6% |
| 4m8kA00 | 3.40.50.1110 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › SGNH hydrolase | 0.55 | 50.0 | 4.41e-01 | 100.0% | 70.9% |
| 3ntvA00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.54 | 38.0 | 3.37e-01 | 99.3% | 49.5% |
| 2ychA01 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.54 | 37.0 | 3.61e-01 | 100.0% | 63.9% |
| 2npnA01 | 3.40.1010.10 | Alpha Beta › 3-Layer(aba) Sandwich › Cobalt-precorrin-4 Transmethylase; domain 1 › Tetrapyrrole methylase, N-terminal domain | 0.54 | 38.0 | 3.98e-01 | 99.3% | 80.6% |
| 2bisA01 | 3.40.50.2000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; | 0.54 | 49.0 | 4.09e-01 | 100.0% | 61.4% |
| 6lfnA01 | 3.40.50.2000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; | 0.53 | 45.0 | 3.69e-01 | 97.2% | 49.8% |
| 3dmyA03 | 3.40.50.261 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Succinyl-CoA synthetase domains | 0.53 | 42.0 | 4.02e-01 | 97.9% | 72.4% |
| 3khyA01 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.53 | 37.0 | 3.41e-01 | 71.5% | 96.3% |
| 3kwlA03 | 1.20.1050.140 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.53 | 43.0 | 4.22e-01 | 100.0% | 81.6% |
| 7fj9B01 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.53 | 39.0 | 3.84e-01 | 77.1% | 100.0% |
| 3ttcA03 | 3.30.420.360 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › | 0.52 | 36.0 | 3.85e-01 | 90.3% | 82.6% |
| 1j24A00 | 3.40.50.10130 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.52 | 37.0 | 3.86e-01 | 73.6% | 82.0% |
| 1w36C01 | 3.40.50.10930 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.52 | 37.0 | 3.27e-01 | 100.0% | 49.3% |
| 3dl2A01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.51 | 44.0 | 4.49e-01 | 99.3% | 95.0% |
| 2py6A03 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.51 | 41.0 | 3.85e-01 | 99.3% | 68.3% |
| 1usgA02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.51 | 37.0 | 3.80e-01 | 99.3% | 76.4% |
| 4h0oA01 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.51 | 36.0 | 3.36e-01 | 72.2% | 96.6% |
| 7lnpA01 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.51 | 47.0 | 3.49e-01 | 100.0% | 68.8% |
| 2v6fA00 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.50 | 45.0 | 3.39e-01 | 98.6% | 46.8% |
| 1rqeA01 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.50 | 36.0 | 2.88e-01 | 73.6% | 55.6% |
| 3qyfA01 | 3.40.50.10770 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Hypothetical protein VC1899 like domain (Restriction endonuclease-like) | 0.50 | 45.0 | 4.32e-01 | 98.6% | 93.9% |
ECOD (60)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3978226 | 2499.2.1.1 ↗ | a/b three-layered sandwiches › Subtilisin-like › Domain III of tail sheath protein Gp18 › Domain III of tail sheath protein Gp18 › Phage_sheath_1 | 0.78 | 70.0 | 5.48e-01 | 100.0% | 48.2% |
| 4069467 | 4978.1.1.1 ↗ | a/b three-layered sandwiches › a/b domain in AF0625-like proteins › a/b domain in AF0625-like proteins › a/b domain in AF0625-like proteins › tRNA_deacylase | 0.75 | 45.0 | 5.57e-01 | 98.6% | 95.6% |
| 5076533 | 4978.1.1.1 ↗ | a/b three-layered sandwiches › a/b domain in AF0625-like proteins › a/b domain in AF0625-like proteins › a/b domain in AF0625-like proteins › tRNA_deacylase | 0.74 | 45.0 | 5.38e-01 | 98.6% | 91.6% |
| 4062292 | 4978.1.1.1 ↗ | a/b three-layered sandwiches › a/b domain in AF0625-like proteins › a/b domain in AF0625-like proteins › a/b domain in AF0625-like proteins › tRNA_deacylase | 0.73 | 43.0 | 5.36e-01 | 97.9% | 97.6% |
| 4943603 | 4978.1.1.0 ↗ | a/b three-layered sandwiches › a/b domain in AF0625-like proteins › a/b domain in AF0625-like proteins › a/b domain in AF0625-like proteins | 0.73 | 44.0 | 5.50e-01 | 97.2% | 100.0% |
| 4978902 | 4978.1.1.1 ↗ | a/b three-layered sandwiches › a/b domain in AF0625-like proteins › a/b domain in AF0625-like proteins › a/b domain in AF0625-like proteins › tRNA_deacylase | 0.73 | 43.0 | 5.33e-01 | 97.9% | 94.4% |
| 5066397 | 4978.1.1.1 ↗ | a/b three-layered sandwiches › a/b domain in AF0625-like proteins › a/b domain in AF0625-like proteins › a/b domain in AF0625-like proteins › tRNA_deacylase | 0.73 | 43.0 | 5.27e-01 | 98.6% | 93.3% |
| 4669960 | 4978.1.1.0 ↗ | a/b three-layered sandwiches › a/b domain in AF0625-like proteins › a/b domain in AF0625-like proteins › a/b domain in AF0625-like proteins | 0.72 | 43.0 | 5.41e-01 | 98.6% | 100.0% |
| 5005087 | 4978.1.1.1 ↗ | a/b three-layered sandwiches › a/b domain in AF0625-like proteins › a/b domain in AF0625-like proteins › a/b domain in AF0625-like proteins › tRNA_deacylase | 0.72 | 42.0 | 4.52e-01 | 97.9% | 66.4% |
| 4125585 | 4978.1.1.1 ↗ | a/b three-layered sandwiches › a/b domain in AF0625-like proteins › a/b domain in AF0625-like proteins › a/b domain in AF0625-like proteins › tRNA_deacylase | 0.72 | 43.0 | 5.33e-01 | 99.3% | 98.8% |
| 5074902 | 4978.1.1.1 ↗ | a/b three-layered sandwiches › a/b domain in AF0625-like proteins › a/b domain in AF0625-like proteins › a/b domain in AF0625-like proteins › tRNA_deacylase | 0.72 | 43.0 | 5.26e-01 | 97.9% | 94.4% |
| 5000466 | 4978.1.1.1 ↗ | a/b three-layered sandwiches › a/b domain in AF0625-like proteins › a/b domain in AF0625-like proteins › a/b domain in AF0625-like proteins › tRNA_deacylase | 0.72 | 44.0 | 5.39e-01 | 98.6% | 98.9% |
| 4273752 | 4978.1.1.1 ↗ | a/b three-layered sandwiches › a/b domain in AF0625-like proteins › a/b domain in AF0625-like proteins › a/b domain in AF0625-like proteins › tRNA_deacylase | 0.71 | 44.0 | 5.39e-01 | 98.6% | 98.9% |
| 4936294 | 2007.1.3.73 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › DUF2325 | 0.70 | 41.0 | 4.57e-01 | 99.3% | 73.6% |
| 4192990 | 4978.1.1.1 ↗ | a/b three-layered sandwiches › a/b domain in AF0625-like proteins › a/b domain in AF0625-like proteins › a/b domain in AF0625-like proteins › tRNA_deacylase | 0.69 | 42.0 | 5.06e-01 | 100.0% | 92.6% |
| 4969233 | 2007.1.3.73 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › DUF2325 | 0.68 | 40.0 | 4.68e-01 | 100.0% | 82.0% |
| 5048748 | 4978.1.1.1 ↗ | a/b three-layered sandwiches › a/b domain in AF0625-like proteins › a/b domain in AF0625-like proteins › a/b domain in AF0625-like proteins › tRNA_deacylase | 0.68 | 42.0 | 5.11e-01 | 100.0% | 97.8% |
| 3223797 | 7590.1.1.2 ↗ | a/b three-layered sandwiches › Middle domain in Argonaute homologs › Middle domain in Argonaute homologs › Middle domain in Argonaute homologs › Piwi | 0.67 | 46.0 | 4.40e-01 | 100.0% | 60.6% |
| 3583806 | 7590.1.1.6 ↗ | a/b three-layered sandwiches › Middle domain in Argonaute homologs › Middle domain in Argonaute homologs › Middle domain in Argonaute homologs › ArgoMid | 0.67 | 47.0 | 4.46e-01 | 100.0% | 61.2% |
| 3194939 | 7590.1.1.2 ↗ | a/b three-layered sandwiches › Middle domain in Argonaute homologs › Middle domain in Argonaute homologs › Middle domain in Argonaute homologs › Piwi | 0.66 | 48.0 | 4.54e-01 | 100.0% | 62.9% |
| 4947970 | 2484.1.1.94 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › HypF_C_2 | 0.63 | 39.0 | 4.25e-01 | 99.3% | 75.7% |
| 5021396 | 7512.1.1.30 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glyco_transf_4 | 0.62 | 49.0 | 4.21e-01 | 99.3% | 52.6% |
| 5083164 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.62 | 38.0 | 4.07e-01 | 99.3% | 69.6% |
| 5073563 | 7512.1.1.30 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glyco_transf_4 | 0.62 | 44.0 | 4.10e-01 | 100.0% | 60.0% |
| 5061175 | 7512.1.1.30 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glyco_transf_4 | 0.61 | 46.0 | 4.34e-01 | 100.0% | 64.6% |
| 3678933 | 7590.1.1.3 ↗ | a/b three-layered sandwiches › Middle domain in Argonaute homologs › Middle domain in Argonaute homologs › Middle domain in Argonaute homologs › Piwi,ArgoMid | 0.61 | 46.0 | 4.29e-01 | 99.3% | 62.2% |
| 3785575 | 7590.1.1.0 ↗ | a/b three-layered sandwiches › Middle domain in Argonaute homologs › Middle domain in Argonaute homologs › Middle domain in Argonaute homologs | 0.61 | 47.0 | 4.22e-01 | 100.0% | 59.0% |
| 3261010 | 7579.1.1.58 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › DUF829 | 0.60 | 43.0 | 3.64e-01 | 99.3% | 43.7% |
| 3383717 | 4978.1.1.1 ↗ | a/b three-layered sandwiches › a/b domain in AF0625-like proteins › a/b domain in AF0625-like proteins › a/b domain in AF0625-like proteins › tRNA_deacylase | 0.60 | 43.0 | 4.82e-01 | 98.6% | 96.4% |
| 4983788 | 2007.1.5.2 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › ATC-like › CCG | 0.59 | 44.0 | 4.60e-01 | 100.0% | 84.6% |
| 5056072 | 7512.1.1.30 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glyco_transf_4 | 0.59 | 48.0 | 4.25e-01 | 99.3% | 60.5% |
| 4344827 | 2002.3.1.2 ↗ | a/b barrels › TIM beta/alpha-barrel › Glycoside hydrolase/deacetylase › Glycoside hydrolase/deacetylase › Polysacc_deac_1 | 0.58 | 37.0 | 3.41e-01 | 97.9% | 47.4% |
| 4978721 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.57 | 41.0 | 4.46e-01 | 92.4% | 92.2% |
| 5074314 | 2007.1.5.2 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › ATC-like › CCG | 0.57 | 43.0 | 4.19e-01 | 99.3% | 72.9% |
| 5029329 | 7592.1.1.0 ↗ | a/b three-layered sandwiches › CARF (CRISPR-associated Rossmann fold) domains › CARF (CRISPR-associated Rossmann fold) domains › CARF (CRISPR-associated Rossmann fold) domains | 0.57 | 40.0 | 4.50e-01 | 99.3% | 95.5% |
| 4200910 | 2002.3.1.2 ↗ | a/b barrels › TIM beta/alpha-barrel › Glycoside hydrolase/deacetylase › Glycoside hydrolase/deacetylase › Polysacc_deac_1 | 0.56 | 36.0 | 3.31e-01 | 97.9% | 46.7% |
| 4299826 | 2002.3.1.2 ↗ | a/b barrels › TIM beta/alpha-barrel › Glycoside hydrolase/deacetylase › Glycoside hydrolase/deacetylase › Polysacc_deac_1 | 0.56 | 36.0 | 2.97e-01 | 98.6% | 33.5% |
| 5027612 | 7592.1.1.0 ↗ | a/b three-layered sandwiches › CARF (CRISPR-associated Rossmann fold) domains › CARF (CRISPR-associated Rossmann fold) domains › CARF (CRISPR-associated Rossmann fold) domains | 0.56 | 41.0 | 4.48e-01 | 98.6% | 93.9% |
| 5004641 | 7512.1.1.30 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glyco_transf_4 | 0.56 | 48.0 | 4.39e-01 | 100.0% | 69.2% |
| 4986108 | 2007.1.5.2 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › ATC-like › CCG | 0.56 | 41.0 | 4.24e-01 | 99.3% | 80.0% |
| 4962073 | 2003.1.1.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains | 0.56 | 42.0 | 4.53e-01 | 99.3% | 95.0% |
| 4257123 | 7512.1.1.30 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glyco_transf_4 | 0.55 | 49.0 | 4.32e-01 | 98.6% | 66.8% |
| 4996876 | 2007.1.5.2 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › ATC-like › CCG | 0.55 | 41.0 | 4.29e-01 | 99.3% | 86.2% |
| 5016064 | 7512.1.1.30 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glyco_transf_4 | 0.55 | 50.0 | 4.41e-01 | 100.0% | 69.3% |
| 3936794 | 7529.1.1.0 ↗ | a/b three-layered sandwiches › Macro domain-like › Macro domain-like › Macro domain-like | 0.55 | 51.0 | 4.74e-01 | 99.3% | 82.3% |
| 4946825 | 7512.1.1.30 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glyco_transf_4 | 0.55 | 47.0 | 4.10e-01 | 100.0% | 62.1% |
| 3602927 | 2002.1.1.44 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › TatD_DNase | 0.55 | 40.0 | 3.35e-01 | 99.3% | 42.7% |
| 4458322 | 2004.1.1.201 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_26 | 0.55 | 41.0 | 3.65e-01 | 100.0% | 53.7% |
| 1497952 | 2003.1.1.79 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › ISPD_C | 0.54 | 42.0 | 4.08e-01 | 98.6% | 74.7% |
| 1937223 | 7550.1.1.1 ↗ | a/b three-layered sandwiches › Tetrapyrrole methylase N-terminal domain › Tetrapyrrole methylase N-terminal domain › Tetrapyrrole methylase N-terminal domain › TP_methylase | 0.54 | 38.0 | 3.98e-01 | 99.3% | 80.6% |
| 3263231 | 246.2.1.1 ↗ | a+b four layers › Carbon-nitrogen hydrolase-like › Metallo-dependent phosphatases › Metallo-dependent phosphatases › Metallophos | 0.53 | 36.0 | 3.02e-01 | 99.3% | 39.2% |
| 4013300 | 7512.1.1.95 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › PF28142 | 0.53 | 43.0 | 4.26e-01 | 100.0% | 81.3% |
| 3980758 | 2007.3.1.1 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Succinyl-CoA synthetase domains › Succinyl-CoA synthetase domains › Ligase_CoA | 0.52 | 42.0 | 3.93e-01 | 100.0% | 67.6% |
| 5047752 | 2011.1.1.6 ↗ | a/b three-layered sandwiches › Phosphorylase/hydrolase-like › Zn-dependent exopeptidases › Zn-dependent exopeptidases › Peptidase_M20 | 0.52 | 44.0 | 3.67e-01 | 92.4% | 81.2% |
| 5025407 | 7522.1.1.4 ↗ | a/b three-layered sandwiches › TK C-terminal domain-like › TK C-terminal domain-like › TK C-terminal domain-like › PFOR_II | 0.52 | 34.0 | 3.61e-01 | 89.6% | 75.2% |
| 3848077 | 207.1.1.47 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_1,LRR_6 | 0.51 | 43.0 | 3.66e-01 | 91.7% | 65.4% |
| 3817963 | 2011.2.1.16 ↗ | a/b three-layered sandwiches › Phosphorylase/hydrolase-like › Peptidyl-tRNA hydrolase-like › Peptidyl-tRNA hydrolase-like › DUF7894 | 0.50 | 42.0 | 3.63e-01 | 88.9% | 98.2% |
| 4981666 | 2005.1.1.0 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains | 0.50 | 41.0 | 3.92e-01 | 100.0% | 74.1% |
| 3786295 | 2002.1.1.44 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › TatD_DNase | 0.50 | 43.0 | 3.16e-01 | 93.8% | 44.6% |
| 4583568 | 2004.1.1.211 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › CLP1_P | 0.50 | 46.0 | 3.57e-01 | 99.3% | 60.3% |
D2
medium
residues 166-317
Domain cluster:
rep: LC644975.1__BCZ76060.1__X__00055__D244-386
ECOD (4)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3944167 | 2499.2.1.2 ↗ | a/b three-layered sandwiches › Subtilisin-like › Domain III of tail sheath protein Gp18 › Domain III of tail sheath protein Gp18 › Phage_sheath_1,Gp18_domIII_N | 0.93 | 70.0 | 5.60e-01 | 77.0% | 43.7% |
| 1518917 | 2499.2.1.2 ↗ | a/b three-layered sandwiches › Subtilisin-like › Domain III of tail sheath protein Gp18 › Domain III of tail sheath protein Gp18 › Phage_sheath_1,Gp18_domIII_N | 0.91 | 69.0 | 5.46e-01 | 77.6% | 43.2% |
| 3978226 | 2499.2.1.1 ↗ | a/b three-layered sandwiches › Subtilisin-like › Domain III of tail sheath protein Gp18 › Domain III of tail sheath protein Gp18 › Phage_sheath_1 | 0.89 | 71.0 | 5.55e-01 | 80.9% | 45.7% |
| 4888782 | 2499.2.1.2 ↗ | a/b three-layered sandwiches › Subtilisin-like › Domain III of tail sheath protein Gp18 › Domain III of tail sheath protein Gp18 › Phage_sheath_1,Gp18_domIII_N | 0.86 | 78.0 | 6.20e-01 | 94.1% | 58.3% |
D3
medium
residues 318-397
Domain cluster:
rep: KX925554.1__APC46400.1__X__00138__D572-647
CATH (4)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5eqjB02 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.62 | 45.0 | 3.21e-01 | 76.2% | 35.5% |
| 4n2oA00 | 2.60.40.680 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.57 | 39.0 | 2.92e-01 | 70.0% | 48.7% |
| 2od6C00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.54 | 36.0 | 3.29e-01 | 71.2% | 51.4% |
| 1ek9A00 | 1.20.1600.10 | Mainly Alpha › Up-down Bundle › Outer membrane efflux proteins (OEP) › Outer membrane efflux proteins (OEP) | 0.53 | 38.0 | 2.47e-01 | 76.2% | 86.9% |
ECOD (20)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3949098 | 283.2.1.2 ↗ | a+b duplicates or obligate multimers › Creatinase/aminopeptidase-like › gpW/gp25-like › gpW/gp25-like › Phage_sheath_1C | 0.93 | 81.0 | 7.14e-01 | 92.5% | 66.4% |
| 3980756 | 283.2.1.2 ↗ | a+b duplicates or obligate multimers › Creatinase/aminopeptidase-like › gpW/gp25-like › gpW/gp25-like › Phage_sheath_1C | 0.92 | 72.0 | 6.51e-01 | 82.5% | 63.8% |
| 4957559 | 283.2.1.2 ↗ | a+b duplicates or obligate multimers › Creatinase/aminopeptidase-like › gpW/gp25-like › gpW/gp25-like › Phage_sheath_1C | 0.85 | 63.0 | 5.78e-01 | 77.5% | 67.0% |
| 4888785 | 283.2.1.2 ↗ | a+b duplicates or obligate multimers › Creatinase/aminopeptidase-like › gpW/gp25-like › gpW/gp25-like › Phage_sheath_1C | 0.79 | 63.0 | 6.18e-01 | 85.0% | 87.2% |
| 1518918 | 283.2.1.2 ↗ | a+b duplicates or obligate multimers › Creatinase/aminopeptidase-like › gpW/gp25-like › gpW/gp25-like › Phage_sheath_1C | 0.77 | 67.0 | 6.00e-01 | 98.8% | 68.8% |
| 3973305 | 304.4.1.20 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › AsnC_trans_reg2 | 0.65 | 37.0 | 3.31e-01 | 70.0% | 38.6% |
| 2797934 | 304.113.1.1 ↗ | a+b two layers › Alpha-beta plaits › Alpha subunit of glutamate synthase, insertion domain › Alpha subunit of glutamate synthase, insertion domain › GATase_2 | 0.64 | 43.0 | 3.87e-01 | 70.0% | 51.7% |
| 3581769 | 4292.2.1.2 ↗ | a+b two layers › FlaG-like › MAGUK binding stalk (MBS) domain › MAGUK binding stalk (MBS) domain › KIF1B | 0.62 | 43.0 | 3.59e-01 | 71.2% | 80.0% |
| 3387627 | 304.113.1.1 ↗ | a+b two layers › Alpha-beta plaits › Alpha subunit of glutamate synthase, insertion domain › Alpha subunit of glutamate synthase, insertion domain › GATase_2 | 0.61 | 41.0 | 4.14e-01 | 70.0% | 75.0% |
| 3276097 | 304.20.1.1 ↗ | a+b two layers › Alpha-beta plaits › PAP/Archaeal CCA-adding enzyme, C-terminal domain › PAP/Archaeal CCA-adding enzyme, C-terminal domain › PAP_RNA-bind | 0.60 | 41.0 | 3.48e-01 | 72.5% | 43.6% |
| 3918163 | 304.20.1.1 ↗ | a+b two layers › Alpha-beta plaits › PAP/Archaeal CCA-adding enzyme, C-terminal domain › PAP/Archaeal CCA-adding enzyme, C-terminal domain › PAP_RNA-bind | 0.59 | 41.0 | 3.44e-01 | 71.2% | 42.1% |
| 3480319 | 304.113.1.1 ↗ | a+b two layers › Alpha-beta plaits › Alpha subunit of glutamate synthase, insertion domain › Alpha subunit of glutamate synthase, insertion domain › GATase_2 | 0.59 | 40.0 | 3.67e-01 | 70.0% | 54.5% |
| 3291436 | 304.113.1.1 ↗ | a+b two layers › Alpha-beta plaits › Alpha subunit of glutamate synthase, insertion domain › Alpha subunit of glutamate synthase, insertion domain › GATase_2 | 0.59 | 40.0 | 3.51e-01 | 70.0% | 52.0% |
| 3479781 | 304.113.1.0 ↗ | a+b two layers › Alpha-beta plaits › Alpha subunit of glutamate synthase, insertion domain › Alpha subunit of glutamate synthase, insertion domain | 0.58 | 39.0 | 3.61e-01 | 71.2% | 58.2% |
| 4187036 | 306.7.1.0 ↗ | a+b two layers › Glucose permease domain IIB-like › Trigger factor ribosome-binding domain › Trigger factor ribosome-binding domain | 0.55 | 38.0 | 3.46e-01 | 72.5% | 59.1% |
| 2393168 | 327.12.1.1 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › UbiD C-terminal domain-like › UbiD C-terminal domain-like › UbiD_C | 0.54 | 34.0 | 2.74e-01 | 70.0% | 30.2% |
| 3706941 | 312.1.1.0 ↗ | a+b three layers › HIT-like › HIT-related › HIT-related | 0.53 | 36.0 | 3.04e-01 | 71.2% | 40.6% |
| 3610154 | 1189.1.1.0 ↗ | alpha bundles › VSG (variant surface glycoprotein) N-terminal domain and haptoglobin-hemoglobin receptor › VSG (variant surface glycoprotein) N-terminal domain and haptoglobin-hemoglobin receptor › VSG (variant surface glycoprotein) N-terminal domain and haptoglobin-hemoglobin receptor | 0.52 | 37.0 | 2.46e-01 | 77.5% | 46.3% |
| 3187447 | 11.1.4.16 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like › EMC7_beta-sandw | 0.51 | 35.0 | 2.97e-01 | 71.2% | 95.7% |
| 3286759 | 310.2.1.0 ↗ | a+b two layers › RRF/tRNA synthetase additional domain-like › Ribosome recycling factor, RRF › Ribosome recycling factor, RRF | 0.50 | 34.0 | 2.89e-01 | 72.5% | 79.3% |