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MW476490.1__QRD99559.1__X__00002
Bact-VirMW476490.1__QRD99559.1__X__00002
Identity
- Accession:
- MW476490 ↗
- Kingdom:
- phage
Quality
72.9
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 42-111
Domain cluster:
representative
CATH (27)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2evrA01 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.73 | 61.0 | 6.07e-01 | 100.0% | 86.5% |
| 3h41A02 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.71 | 56.0 | 5.73e-01 | 100.0% | 89.7% |
| 1ov3A02 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.70 | 51.0 | 5.61e-01 | 100.0% | 98.2% |
| 5o99A00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.70 | 50.0 | 5.38e-01 | 100.0% | 90.0% |
| 6bioA01 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.68 | 52.0 | 5.63e-01 | 95.7% | 100.0% |
| 1gcqB00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.67 | 49.0 | 5.29e-01 | 100.0% | 94.7% |
| 2pqhB00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.67 | 49.0 | 5.04e-01 | 100.0% | 84.6% |
| 1zuyA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.65 | 50.0 | 5.35e-01 | 100.0% | 98.3% |
| 2dmoA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.65 | 47.0 | 4.81e-01 | 100.0% | 80.9% |
| 6vlfA03 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.64 | 48.0 | 5.17e-01 | 100.0% | 98.3% |
| 2eczA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.64 | 48.0 | 4.85e-01 | 100.0% | 81.4% |
| 2kymA01 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.63 | 48.0 | 4.40e-01 | 100.0% | 62.4% |
| 4jglA00 | 2.40.128.530 | Mainly Beta › Beta Barrel › Lipocalin › | 0.62 | 47.0 | 3.74e-01 | 82.9% | 79.6% |
| 2e9xD02 | 3.40.5.60 | Alpha Beta › 3-Layer(aba) Sandwich › Ribosomal Protein L9; domain 1 › | 0.62 | 44.0 | 4.67e-01 | 100.0% | 88.3% |
| 3shrA02 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.60 | 46.0 | 3.74e-01 | 100.0% | 43.1% |
| 3qjoA02 | 2.60.310.10 | Mainly Beta › Sandwich › Hemocyanin; Chain: A, domain 2 › Haemocyanin C-terminal domain | 0.60 | 43.0 | 3.72e-01 | 77.1% | 78.6% |
| 1o7fA01 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.59 | 45.0 | 3.54e-01 | 100.0% | 38.1% |
| 1v1cA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.58 | 47.0 | 4.77e-01 | 100.0% | 92.6% |
| 3eqeA00 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.58 | 52.0 | 3.98e-01 | 100.0% | 50.0% |
| 1wapA00 | 2.60.40.50 | Mainly Beta › Sandwich › Immunoglobulin-like › TRAP-like | 0.57 | 44.0 | 4.48e-01 | 100.0% | 88.2% |
| 4qmaA02 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.55 | 47.0 | 3.83e-01 | 100.0% | 58.0% |
| 3nziA01 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.53 | 44.0 | 3.82e-01 | 91.4% | 78.3% |
| 6a6yA00 | 2.60.40.1490 | Mainly Beta › Sandwich › Immunoglobulin-like › Histone chaperone ASF1-like | 0.53 | 44.0 | 3.51e-01 | 95.7% | 96.7% |
| 5xnrA01 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.52 | 44.0 | 3.70e-01 | 98.6% | 76.4% |
| 4fixA01 | 3.90.550.60 | Alpha Beta › Alpha-Beta Complex › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A › | 0.51 | 44.0 | 2.79e-01 | 100.0% | 25.6% |
| 1pgsA01 | 2.60.120.230 | Mainly Beta › Sandwich › Jelly Rolls › | 0.50 | 44.0 | 3.60e-01 | 100.0% | 80.7% |
| 3e8vA00 | 2.60.40.1120 | Mainly Beta › Sandwich › Immunoglobulin-like › Carboxypeptidase-like, regulatory domain | 0.50 | 43.0 | 4.15e-01 | 97.1% | 89.0% |
ECOD (39)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3895159 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.74 | 56.0 | 6.03e-01 | 97.1% | 95.0% |
| 3530247 | 4.1.1.1 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_1 | 0.70 | 54.0 | 5.54e-01 | 100.0% | 89.2% |
| 4133335 | 4.1.1.1 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_1 | 0.70 | 50.0 | 5.35e-01 | 100.0% | 88.3% |
| 4033023 | 4.1.1.454 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3b_T | 0.69 | 58.0 | 5.46e-01 | 100.0% | 78.8% |
| 165657 | 4.1.1.1 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_1 | 0.68 | 50.0 | 5.13e-01 | 100.0% | 82.1% |
| 3269589 | 4.1.1.92 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_9 | 0.68 | 49.0 | 4.99e-01 | 100.0% | 77.1% |
| 4171510 | 4.1.1.1 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_1 | 0.65 | 49.0 | 4.74e-01 | 100.0% | 71.2% |
| 3633434 | 4.1.1.1 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_1 | 0.65 | 49.0 | 4.94e-01 | 100.0% | 81.4% |
| 3759402 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.65 | 49.0 | 5.07e-01 | 100.0% | 90.8% |
| 3254502 | 4.1.1.92 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_9 | 0.63 | 51.0 | 4.65e-01 | 100.0% | 65.3% |
| 3880204 | 220.1.1.199 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_NISCH_C | 0.58 | 47.0 | 3.65e-01 | 94.3% | 66.7% |
| 3848483 | 4.1.1.248 ↗ | beta barrels › SH3 › SH3 › SH3 › CABIT | 0.57 | 48.0 | 4.42e-01 | 100.0% | 78.6% |
| 3530890 | 2004.1.1.402 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › CABIT | 0.56 | 47.0 | 4.48e-01 | 98.6% | 84.1% |
| 3473329 | 382.1.1.0 ↗ | few secondary structure elements › Snake toxin-like › Snake toxin-like › Snake toxin-like | 0.56 | 42.0 | 4.28e-01 | 82.9% | 87.1% |
| 3396255 | 11.1.1.822 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › DUF229 | 0.56 | 47.0 | 4.12e-01 | 94.3% | 82.9% |
| 3408263 | 11.1.1.822 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › DUF229 | 0.55 | 46.0 | 4.23e-01 | 94.3% | 85.3% |
| 3637870 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.55 | 45.0 | 4.25e-01 | 100.0% | 75.3% |
| 3276899 | 220.1.1.66 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › SOS1_NGEF_PH | 0.55 | 45.0 | 3.86e-01 | 94.3% | 71.4% |
| 3903397 | 102.1.1.124 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › CABIT | 0.55 | 46.0 | 4.48e-01 | 98.6% | 85.0% |
| 3393658 | 11.1.1.822 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › DUF229 | 0.55 | 45.0 | 4.09e-01 | 94.3% | 83.0% |
| 3247492 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.54 | 44.0 | 4.20e-01 | 91.4% | 75.3% |
| 3939886 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.53 | 44.0 | 3.43e-01 | 92.9% | 59.4% |
| 5012252 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.52 | 45.0 | 3.92e-01 | 98.6% | 71.8% |
| 2879296 | 10.32.1.78 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › PirA-like | 0.52 | 45.0 | 4.06e-01 | 100.0% | 94.0% |
| 3907934 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.52 | 42.0 | 3.72e-01 | 92.9% | 73.6% |
| 4038352 | 10.32.1.273 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › PF29775 | 0.52 | 45.0 | 3.87e-01 | 100.0% | 80.0% |
| 4955277 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.52 | 42.0 | 3.65e-01 | 92.9% | 86.1% |
| 3402093 | 11.1.1.822 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › DUF229 | 0.51 | 42.0 | 3.83e-01 | 91.4% | 83.2% |
| 4874174 | 10.2.1.5 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › TGFb_propeptide | 0.51 | 45.0 | 3.19e-01 | 100.0% | 35.0% |
| 3397468 | 11.1.1.822 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › DUF229 | 0.51 | 42.0 | 3.69e-01 | 91.4% | 79.0% |
| 3411669 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.51 | 41.0 | 3.63e-01 | 91.4% | 86.4% |
| 3678764 | 11.1.4.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like | 0.51 | 43.0 | 3.86e-01 | 97.1% | 95.2% |
| 3459135 | 9.3.1.0 ↗ | beta barrels › Lipocalins/Streptavidin › Quinohemoprotein amine dehydrogenase A chain, domain 3-like › Quinohemoprotein amine dehydrogenase A chain, domain 3-like | 0.51 | 40.0 | 3.58e-01 | 91.4% | 95.5% |
| 3239942 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.51 | 41.0 | 3.68e-01 | 92.9% | 81.0% |
| 4180781 | 10.2.1.0 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) | 0.51 | 45.0 | 3.59e-01 | 100.0% | 77.9% |
| 3433938 | 4.1.1.298 ↗ | beta barrels › SH3 › SH3 › SH3 › PF26133 | 0.50 | 42.0 | 3.79e-01 | 94.3% | 98.0% |
| 5039566 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.50 | 42.0 | 3.76e-01 | 94.3% | 87.0% |
| 3511338 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.50 | 41.0 | 3.80e-01 | 91.4% | 75.6% |
| 5060808 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.50 | 43.0 | 4.10e-01 | 98.6% | 95.3% |